| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901270
Identifier: 159901270
GI number: 159901270
Start: 6064402
End: 6065019
Strand: Reverse
Name: 159901270
Synonym: Haur_4758
Alternate gene names: NA
Gene position: 6065019-6064402 (Counterclockwise)
Preceding gene: 159901271
Following gene: 159901269
Centisome position: 95.56
GC content: 42.23
Gene sequence:
>618_bases ATGCTGCTGAGTAATGAGAGAACATCCATGCAATCTTCGCTGATCAAACAACGGCTACGCGTGCCCTATTATCGCTGGCA GATCGCTGCTGTCTTTCTGTATTTTATCTTGGTAGTCTTCAATTTCTGGATACCAACCAAGACCAGTGTGCCATTAATTA CCTACTCGAATATGATTATCTATCCGCTCCTGCTGATTCAATTCAGCATGAATGTTATTTCTTATCTCGATCTGAGTGCT CGTGGCTTGGTTATGCGGCGCGGTTGGCAACGTTTTGAAGTTAATTGGGAGCACATTGAAGCGTTTGGCATTGGCACAAT TGGCCGACGGCGCTATCTGCCATATATTATTTTGCATCAGCCGATTAAAGGCTTACCAAGCGTGAAATTAAAGGAACTAA CGCCAGAACAACGACAGCGCACATTAACCCTAGAAGGCTGGGATAACCCCGAAATTATTGCAAAAACCTTACATGCCAGT CTGGCATCTACGACCGATCAATGGCAGGTGACTCCCGACTTTTCCAAAAGCTTGAAGTTCTTTTATTCGTATCAAAAAAT GATTGCTTGGGCAACGCTGGTTGTTATATTAATTTTTGTTTATTTATTTTTTTTATAG
Upstream 100 bases:
>100_bases ATACGATCTTAGCCCAAGGGATTTAGCCCAAATCCGTGCAGCAGTAGTGCAACCGCGTTGCTGCTGCAACCTTGTTGATC CCCCAACGTAAACAATCACG
Downstream 100 bases:
>100_bases AAAGTAAATTATGAGTTCTGGAAAATTTAGACCTAAGAATTTTAGATCTTATGTATCAGTTTCTTTGTTTATGTCATTTA TGTCGCTCTATTGGATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLLSNERTSMQSSLIKQRLRVPYYRWQIAAVFLYFILVVFNFWIPTKTSVPLITYSNMIIYPLLLIQFSMNVISYLDLSA RGLVMRRGWQRFEVNWEHIEAFGIGTIGRRRYLPYIILHQPIKGLPSVKLKELTPEQRQRTLTLEGWDNPEIIAKTLHAS LASTTDQWQVTPDFSKSLKFFYSYQKMIAWATLVVILIFVYLFFL
Sequences:
>Translated_205_residues MLLSNERTSMQSSLIKQRLRVPYYRWQIAAVFLYFILVVFNFWIPTKTSVPLITYSNMIIYPLLLIQFSMNVISYLDLSA RGLVMRRGWQRFEVNWEHIEAFGIGTIGRRRYLPYIILHQPIKGLPSVKLKELTPEQRQRTLTLEGWDNPEIIAKTLHAS LASTTDQWQVTPDFSKSLKFFYSYQKMIAWATLVVILIFVYLFFL >Mature_205_residues MLLSNERTSMQSSLIKQRLRVPYYRWQIAAVFLYFILVVFNFWIPTKTSVPLITYSNMIIYPLLLIQFSMNVISYLDLSA RGLVMRRGWQRFEVNWEHIEAFGIGTIGRRRYLPYIILHQPIKGLPSVKLKELTPEQRQRTLTLEGWDNPEIIAKTLHAS LASTTDQWQVTPDFSKSLKFFYSYQKMIAWATLVVILIFVYLFFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24238; Mature: 24238
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSNERTSMQSSLIKQRLRVPYYRWQIAAVFLYFILVVFNFWIPTKTSVPLITYSNMII CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHH YPLLLIQFSMNVISYLDLSARGLVMRRGWQRFEVNWEHIEAFGIGTIGRRRYLPYIILHQ HHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCCHHHHHEECCCCCCHHHHCCEEEEEC PIKGLPSVKLKELTPEQRQRTLTLEGWDNPEIIAKTLHASLASTTDQWQVTPDFSKSLKF CCCCCCCCCHHHCCHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH FYSYQKMIAWATLVVILIFVYLFFL HHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLLSNERTSMQSSLIKQRLRVPYYRWQIAAVFLYFILVVFNFWIPTKTSVPLITYSNMII CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHH YPLLLIQFSMNVISYLDLSARGLVMRRGWQRFEVNWEHIEAFGIGTIGRRRYLPYIILHQ HHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCCHHHHHEECCCCCCHHHHCCEEEEEC PIKGLPSVKLKELTPEQRQRTLTLEGWDNPEIIAKTLHASLASTTDQWQVTPDFSKSLKF CCCCCCCCCHHHCCHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH FYSYQKMIAWATLVVILIFVYLFFL HHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA