| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901268
Identifier: 159901268
GI number: 159901268
Start: 6063116
End: 6063679
Strand: Reverse
Name: 159901268
Synonym: Haur_4756
Alternate gene names: NA
Gene position: 6063679-6063116 (Counterclockwise)
Preceding gene: 159901269
Following gene: 159901267
Centisome position: 95.54
GC content: 33.51
Gene sequence:
>564_bases ATGCAACCAATTATCTTCAGAGCACGTAATTACAAGCGACAATTATTCATAATGTTATTTTCCGAATATATAATGATTGC CATTCCAATCATATTTAAAGTAATCTTTGATATGAAAAGATTTCCAGTATTTTTTGTCATTATGGGTATACTATATTTCT ACGGGGCAATCAGTGACTACCGCAGAGAGTTAATTATTGACGATCAAGGAATTACAGTCAAAAGATTGTTCAATCCCAGC AGAACTGCCGAATGGAAGGATATTTCTGCTATCCAATATTTTATGTTTTTCAATCGGCCAATCGAATATATTCTTTTTGA TCGTGATGTCCAGTTATTAGATGCGCTCTACCCTTCAATTGTGCCAAAACCATATAATCGACGGGTATTGCTTTTAAACG AATGGGATAATTATGAGCAAATCAAGCTGCTAGCTGAGCAAAAAATGCCATCAATAGCAAATAAAGCTTTAATTGTGCCA TTTACGTTTAGTTTATCAAGCTTTATCAAACAAGTGCTTGTGTATGGAGTAATTCTTATTCCAATTATTATTATTTGGGG CTAG
Upstream 100 bases:
>100_bases GTAGTATCTAAGTATACAGTTGCTAAGTATAATATTCCATAGCAACGGCTAAGCCTATACTATATTTCACTTATTATTAG ATTGACAAGGAATTAAATAA
Downstream 100 bases:
>100_bases AATTTGACAAGGCAACAATATTTATTAACCATTCGCCCACGGTATTGGGGGGCAAACCTGGTTTTTTTAGTGCTGGCAAG TGGCGTGATTATCAATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQPIIFRARNYKRQLFIMLFSEYIMIAIPIIFKVIFDMKRFPVFFVIMGILYFYGAISDYRRELIIDDQGITVKRLFNPS RTAEWKDISAIQYFMFFNRPIEYILFDRDVQLLDALYPSIVPKPYNRRVLLLNEWDNYEQIKLLAEQKMPSIANKALIVP FTFSLSSFIKQVLVYGVILIPIIIIWG
Sequences:
>Translated_187_residues MQPIIFRARNYKRQLFIMLFSEYIMIAIPIIFKVIFDMKRFPVFFVIMGILYFYGAISDYRRELIIDDQGITVKRLFNPS RTAEWKDISAIQYFMFFNRPIEYILFDRDVQLLDALYPSIVPKPYNRRVLLLNEWDNYEQIKLLAEQKMPSIANKALIVP FTFSLSSFIKQVLVYGVILIPIIIIWG >Mature_187_residues MQPIIFRARNYKRQLFIMLFSEYIMIAIPIIFKVIFDMKRFPVFFVIMGILYFYGAISDYRRELIIDDQGITVKRLFNPS RTAEWKDISAIQYFMFFNRPIEYILFDRDVQLLDALYPSIVPKPYNRRVLLLNEWDNYEQIKLLAEQKMPSIANKALIVP FTFSLSSFIKQVLVYGVILIPIIIIWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22314; Mature: 22314
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPIIFRARNYKRQLFIMLFSEYIMIAIPIIFKVIFDMKRFPVFFVIMGILYFYGAISDY CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRELIIDDQGITVKRLFNPSRTAEWKDISAIQYFMFFNRPIEYILFDRDVQLLDALYPSI HHHEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH VPKPYNRRVLLLNEWDNYEQIKLLAEQKMPSIANKALIVPFTFSLSSFIKQVLVYGVILI CCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHHH PIIIIWG HHHHHCC >Mature Secondary Structure MQPIIFRARNYKRQLFIMLFSEYIMIAIPIIFKVIFDMKRFPVFFVIMGILYFYGAISDY CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRELIIDDQGITVKRLFNPSRTAEWKDISAIQYFMFFNRPIEYILFDRDVQLLDALYPSI HHHEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH VPKPYNRRVLLLNEWDNYEQIKLLAEQKMPSIANKALIVPFTFSLSSFIKQVLVYGVILI CCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHHH PIIIIWG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA