Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901256

Identifier: 159901256

GI number: 159901256

Start: 6053294

End: 6054097

Strand: Direct

Name: 159901256

Synonym: Haur_4744

Alternate gene names: NA

Gene position: 6053294-6054097 (Clockwise)

Preceding gene: 159901255

Following gene: 159901259

Centisome position: 95.38

GC content: 51.62

Gene sequence:

>804_bases
ATGACAACCTACACTTGGCTTGGCCACGACCGGCCACATCTTGATACCTTGTTCGTTCAAGACCTCGGGGCGATGGTTTT
CGCCAGTTTTGGCGGGGTGGTCGCCCAAGGTGCTCGGAAAAATGAAGATGCTGCGGCTATTTTCATCGATCCTGCTGGCG
GATGGGAATTGGCGGTGGTGATCGATGCTCATCATTCAGCCCAAAGTGCCCTGTTGATTTTAGAAACCTTGGTTGGAGCC
GAAACCCAACTGCGCGAATGTTTGAACCAACCCTTGAATCAAGCCTTTTTTAGCTTGGATCAGGCTTTACTTGATATCTT
TCGTAGCAATCGCTTTCGGGCGCGGTGTGCCGCAATTCAAGGCGAGGCCTCGTGTTTGTTCGTCGCCCGCAAAGATGAAT
ATGTTTGGTATTGGGCAGTTGGCGATTGCATTGGCTATATTTTTCACCCCAGCATTGCACGGCTGGGCGAGATGCAACTC
AACCAACGCCGCTTCTACGAATGGATTGGCAATGTCAATACCTGGGATGGCGTGTTGCCTTCGTACTCCACCGGCATTCG
TTTGCTTCAACCTGGATTGACCACGATTATGTTAACGACTGATGGCTTGCTGGAATGTGGCACACGCCCGTTTGAAAACC
CAACCACCTTGTATAACGCGGTTTGTTGGGAGCAGCACAGTCTGCCACGAGCTGCCCGTGCCTTGCTCGAACGAGTCCAA
ACTGAAGGCGGTCGCGATAGTGCCACTGCCATTTTGTGGCAATTTGATAGCACATGGGCTGGAATTAATCGCGATTTCCG
CTAA

Upstream 100 bases:

>100_bases
AAACCTTGTTACCAGTTGCCGCCCGTGAATTTGCCGCCTTGCAAGAGCGCGATAATCCTTTTCCAACCCTGAATTATCGT
TTGTTTGGGAATTTTGAACG

Downstream 100 bases:

>100_bases
ACACATGCGCCAAGCCACCCCAAATTGACTGATGCTCGGCCTGCAAACCAGCTTGTTTGAAGGCTTGCAGTACATGCCTG
CCATCACCAAAACGTTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVVIDAHHSAQSALLILETLVGA
ETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQGEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQL
NQRRFYEWIGNVNTWDGVLPSYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ
TEGGRDSATAILWQFDSTWAGINRDFR

Sequences:

>Translated_267_residues
MTTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVVIDAHHSAQSALLILETLVGA
ETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQGEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQL
NQRRFYEWIGNVNTWDGVLPSYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ
TEGGRDSATAILWQFDSTWAGINRDFR
>Mature_266_residues
TTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVVIDAHHSAQSALLILETLVGAE
TQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQGEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQLN
QRRFYEWIGNVNTWDGVLPSYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQT
EGGRDSATAILWQFDSTWAGINRDFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29921; Mature: 29790

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVV
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCEEEEEE
IDAHHSAQSALLILETLVGAETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQ
EECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
GEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQLNQRRFYEWIGNVNTWDGVLP
CCCEEEEEEECCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ
CCCCCCEEECCCCEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
TEGGRDSATAILWQFDSTWAGINRDFR
CCCCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVV
CEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCEEEEEE
IDAHHSAQSALLILETLVGAETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQ
EECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
GEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQLNQRRFYEWIGNVNTWDGVLP
CCCEEEEEEECCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ
CCCCCCEEECCCCEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
TEGGRDSATAILWQFDSTWAGINRDFR
CCCCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA