Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901255

Identifier: 159901255

GI number: 159901255

Start: 6051861

End: 6053297

Strand: Direct

Name: 159901255

Synonym: Haur_4743

Alternate gene names: NA

Gene position: 6051861-6053297 (Clockwise)

Preceding gene: 159901254

Following gene: 159901256

Centisome position: 95.36

GC content: 53.51

Gene sequence:

>1437_bases
ATGGAAAAGCCCACGACTGACCAACCAACCGATCTCTGCATCATTATGCATGCCCATGCGCCGTTTGTGCGCCAACCTGG
GCCATCCAGCCATGGCGAAGAAGAGTTACATGGCCTGATGGCCGATTGTTATATTCCGCTTTTACGCGGCCTCGCCGACT
TGATCGAGCAAAATAAAGCGGTCAAAATGGGCTTGGCCATCAGCCCAATTCTGTTGCATCAATTGAATGATCCAGTTGTG
CAAAAGCATATGCTGCATCATCTCGATGAGGCGATTGTTCAGGCCGAGCGGCGGCTTGAAGCAACCAAGGCCGATGAGCA
CGCAGCCTATCTAGCCCAATTTTATTTACAACTGCATCAACGCACCTTACATGTCTTTGAAAAGCAGTGGAGCCGTAATG
TTGTAGCCATGACCCGTGAGTTGGTCGAGGCTGAGGCCTTGGAAGTGCTGGGCCATACGGCAACCTATCCCGTACCACAT
TTATACGATCGCCCGACTTTGCGCACCCAAGTCGAAATTGGCACGATCGCGCTGATGCATTTGCTCGGCCAAACTCCAAG
CGTCTTGTGGAGCGCCGAAGATCCAGTTTCGCCAGAGTGGGAGCAGATTCTCAAGCCTTTGGATATGCGGGCCTTGGTCG
GGACTGCCAACCCTGAGTTACGCGGACAAGCCCTTTCGTGGCTTTCCGAAGCTCGTCAAACCGCTGTGATTACGCCCGAT
CAGCGCTTGCTGACGCATATTCGCTCGGTTGGCTTGGGCTATCCTGGCGATCCGCTATATCGTGCGCCGATGGAAATTCC
CATGGATGATGGCATGCTGAGTCGTGATGGCAGCGCCTATGATCCATTTTATGCCTATGCGCGGGCGCGGATGCATGCCC
GTCACTTCACCGCTGTGCTTAGCGAAACCGCCAGCAACGGCCAGCCCTTAGTGATTGTGGCTGATATGGAATTATTTGGT
AGCGGCTGGTTTGAGGGTGGTTTATGGCTGCGCACGTTGCTCGAAGAATTGCCCAGTCATTTTCGCTTGGTTACGCCTAG
CACCCTGCTCAAACGCCATAAACCTAGCGTGGTTGTGCCGCCACAGCATTTCGCTGGAATTATCGATGGCCGTTTGAGCG
CGGCCCATCGCCAATTACAAGCGGCGGTAGCGCAATATCCCCAAGCTTATGGCGACCGCGAACAGGTGCTCAACCAAGCT
GCCCGTGAATTTTTGCTGGCACAATCAGGCGATTGGGATCGCTGGGTTGGTACGCCTGGCGCAGATTATGCCAATGCTCG
GCGCAGCGAACACCTGCAAAAATTCGATTGGCTGATGCAGTTATTGCCGCATGAAACCTTGTTACCAGTTGCCGCCCGTG
AATTTGCCGCCTTGCAAGAGCGCGATAATCCTTTTCCAACCCTGAATTATCGTTTGTTTGGGAATTTTGAACGATGA

Upstream 100 bases:

>100_bases
ACCGAAATGGTGAGCCACGAACGGGTATTACGGAAGTTAGCGCTGCCAGAAGCAATGCCAGTGGGGAAAGCCAAACGACG
GGGAGGGCGACGCAAATCAT

Downstream 100 bases:

>100_bases
CAACCTACACTTGGCTTGGCCACGACCGGCCACATCTTGATACCTTGTTCGTTCAAGACCTCGGGGCGATGGTTTTCGCC
AGTTTTGGCGGGGTGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Family; (1-_4)-Alpha-D-Glucan Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MEKPTTDQPTDLCIIMHAHAPFVRQPGPSSHGEEELHGLMADCYIPLLRGLADLIEQNKAVKMGLAISPILLHQLNDPVV
QKHMLHHLDEAIVQAERRLEATKADEHAAYLAQFYLQLHQRTLHVFEKQWSRNVVAMTRELVEAEALEVLGHTATYPVPH
LYDRPTLRTQVEIGTIALMHLLGQTPSVLWSAEDPVSPEWEQILKPLDMRALVGTANPELRGQALSWLSEARQTAVITPD
QRLLTHIRSVGLGYPGDPLYRAPMEIPMDDGMLSRDGSAYDPFYAYARARMHARHFTAVLSETASNGQPLVIVADMELFG
SGWFEGGLWLRTLLEELPSHFRLVTPSTLLKRHKPSVVVPPQHFAGIIDGRLSAAHRQLQAAVAQYPQAYGDREQVLNQA
AREFLLAQSGDWDRWVGTPGADYANARRSEHLQKFDWLMQLLPHETLLPVAAREFAALQERDNPFPTLNYRLFGNFER

Sequences:

>Translated_478_residues
MEKPTTDQPTDLCIIMHAHAPFVRQPGPSSHGEEELHGLMADCYIPLLRGLADLIEQNKAVKMGLAISPILLHQLNDPVV
QKHMLHHLDEAIVQAERRLEATKADEHAAYLAQFYLQLHQRTLHVFEKQWSRNVVAMTRELVEAEALEVLGHTATYPVPH
LYDRPTLRTQVEIGTIALMHLLGQTPSVLWSAEDPVSPEWEQILKPLDMRALVGTANPELRGQALSWLSEARQTAVITPD
QRLLTHIRSVGLGYPGDPLYRAPMEIPMDDGMLSRDGSAYDPFYAYARARMHARHFTAVLSETASNGQPLVIVADMELFG
SGWFEGGLWLRTLLEELPSHFRLVTPSTLLKRHKPSVVVPPQHFAGIIDGRLSAAHRQLQAAVAQYPQAYGDREQVLNQA
AREFLLAQSGDWDRWVGTPGADYANARRSEHLQKFDWLMQLLPHETLLPVAAREFAALQERDNPFPTLNYRLFGNFER
>Mature_478_residues
MEKPTTDQPTDLCIIMHAHAPFVRQPGPSSHGEEELHGLMADCYIPLLRGLADLIEQNKAVKMGLAISPILLHQLNDPVV
QKHMLHHLDEAIVQAERRLEATKADEHAAYLAQFYLQLHQRTLHVFEKQWSRNVVAMTRELVEAEALEVLGHTATYPVPH
LYDRPTLRTQVEIGTIALMHLLGQTPSVLWSAEDPVSPEWEQILKPLDMRALVGTANPELRGQALSWLSEARQTAVITPD
QRLLTHIRSVGLGYPGDPLYRAPMEIPMDDGMLSRDGSAYDPFYAYARARMHARHFTAVLSETASNGQPLVIVADMELFG
SGWFEGGLWLRTLLEELPSHFRLVTPSTLLKRHKPSVVVPPQHFAGIIDGRLSAAHRQLQAAVAQYPQAYGDREQVLNQA
AREFLLAQSGDWDRWVGTPGADYANARRSEHLQKFDWLMQLLPHETLLPVAAREFAALQERDNPFPTLNYRLFGNFER

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53938; Mature: 53938

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPTTDQPTDLCIIMHAHAPFVRQPGPSSHGEEELHGLMADCYIPLLRGLADLIEQNKA
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VKMGLAISPILLHQLNDPVVQKHMLHHLDEAIVQAERRLEATKADEHAAYLAQFYLQLHQ
EEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLHVFEKQWSRNVVAMTRELVEAEALEVLGHTATYPVPHLYDRPTLRTQVEIGTIALMH
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH
LLGQTPSVLWSAEDPVSPEWEQILKPLDMRALVGTANPELRGQALSWLSEARQTAVITPD
HHCCCCCEEECCCCCCCCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCC
QRLLTHIRSVGLGYPGDPLYRAPMEIPMDDGMLSRDGSAYDPFYAYARARMHARHFTAVL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SETASNGQPLVIVADMELFGSGWFEGGLWLRTLLEELPSHFRLVTPSTLLKRHKPSVVVP
HHHCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHEEECCHHHHHHCCCCCEEEC
PQHFAGIIDGRLSAAHRQLQAAVAQYPQAYGDREQVLNQAAREFLLAQSGDWDRWVGTPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ADYANARRSEHLQKFDWLMQLLPHETLLPVAAREFAALQERDNPFPTLNYRLFGNFER
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MEKPTTDQPTDLCIIMHAHAPFVRQPGPSSHGEEELHGLMADCYIPLLRGLADLIEQNKA
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VKMGLAISPILLHQLNDPVVQKHMLHHLDEAIVQAERRLEATKADEHAAYLAQFYLQLHQ
EEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLHVFEKQWSRNVVAMTRELVEAEALEVLGHTATYPVPHLYDRPTLRTQVEIGTIALMH
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH
LLGQTPSVLWSAEDPVSPEWEQILKPLDMRALVGTANPELRGQALSWLSEARQTAVITPD
HHCCCCCEEECCCCCCCCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCC
QRLLTHIRSVGLGYPGDPLYRAPMEIPMDDGMLSRDGSAYDPFYAYARARMHARHFTAVL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SETASNGQPLVIVADMELFGSGWFEGGLWLRTLLEELPSHFRLVTPSTLLKRHKPSVVVP
HHHCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHEEECCHHHHHHCCCCCEEEC
PQHFAGIIDGRLSAAHRQLQAAVAQYPQAYGDREQVLNQAAREFLLAQSGDWDRWVGTPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ADYANARRSEHLQKFDWLMQLLPHETLLPVAAREFAALQERDNPFPTLNYRLFGNFER
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA