| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901259
Identifier: 159901259
GI number: 159901259
Start: 6055820
End: 6056512
Strand: Direct
Name: 159901259
Synonym: Haur_4747
Alternate gene names: NA
Gene position: 6055820-6056512 (Clockwise)
Preceding gene: 159901256
Following gene: 159901260
Centisome position: 95.42
GC content: 46.9
Gene sequence:
>693_bases ATGAGCAATAGCCCAACGTTGTGTGCAACATGTAAGCAAAAACCGCCGTTGTGGGACATGATGTATTGTGCCGAGTGTTA TCAACGCCAATTGTTTCGCCAGCGACTAGGCCTCTGGGGCTTGTGGATGGTGATTAGTGTGCTCGAAATGCTGCTTAATA TTGGCGTTGGGGTGGTGGCTGTTTCAAGCGAACTAGCCCAAGAAAGCTCTTTGATCAGCCTGATCTTTTCGGGTGTGATG GTGATCAATAGCATTTTGGCACTATGTGTTGGGGTTGCTCAAACAGCATTAATGAAAAAGAAGATCAAACGCTGGCTGCT TTGGGGGATAGCTGGCGGGCTAGAGGTGCTTTTTTTCTGGATACTGAGCATGCTAGCCTATCAGCAATTTGGTCAAGTTG CCCATTTGTTAATTTTCACAATGGCATGTTCAGGCATCTGTTTGGCAATCATTCAATCCTCATTAATGATTGGCCAAGTG GCACAGCCATGGCGCTGGATTTTGGTCAGTATCGGGTCATGGAGTGTTGCTAGTTTAGCGGCGTTGCTGCTTGAAAATCA ATTCGGTGATCCATTGCTGCAAACCATTTGGGGCCATGCGCTTGGCCGTTTTGTTTATGGGGTTTTCTCTGGTTTAGGCT TTGCGTGGCTACTCACTGATCGTCGTATGTATCAGCCTAAACAGCAGCTTTAA
Upstream 100 bases:
>100_bases AGCTTATGACACAATGCTCCTGTTTAATCGCACAGGGGTTTTTCGGCTACACTACTAGCTCCATCGTGCAAATTAATGTT AATTTGGAGCAAGGCCCATT
Downstream 100 bases:
>100_bases GGAGGGTGTATGGCCGACTATCAGCTTGCCCAACTCAATATTGGCACAATCAAAGCCCCATTAGATACGCCGCTCATGGC TGATTTTACCAATAATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSNSPTLCATCKQKPPLWDMMYCAECYQRQLFRQRLGLWGLWMVISVLEMLLNIGVGVVAVSSELAQESSLISLIFSGVM VINSILALCVGVAQTALMKKKIKRWLLWGIAGGLEVLFFWILSMLAYQQFGQVAHLLIFTMACSGICLAIIQSSLMIGQV AQPWRWILVSIGSWSVASLAALLLENQFGDPLLQTIWGHALGRFVYGVFSGLGFAWLLTDRRMYQPKQQL
Sequences:
>Translated_230_residues MSNSPTLCATCKQKPPLWDMMYCAECYQRQLFRQRLGLWGLWMVISVLEMLLNIGVGVVAVSSELAQESSLISLIFSGVM VINSILALCVGVAQTALMKKKIKRWLLWGIAGGLEVLFFWILSMLAYQQFGQVAHLLIFTMACSGICLAIIQSSLMIGQV AQPWRWILVSIGSWSVASLAALLLENQFGDPLLQTIWGHALGRFVYGVFSGLGFAWLLTDRRMYQPKQQL >Mature_229_residues SNSPTLCATCKQKPPLWDMMYCAECYQRQLFRQRLGLWGLWMVISVLEMLLNIGVGVVAVSSELAQESSLISLIFSGVMV INSILALCVGVAQTALMKKKIKRWLLWGIAGGLEVLFFWILSMLAYQQFGQVAHLLIFTMACSGICLAIIQSSLMIGQVA QPWRWILVSIGSWSVASLAALLLENQFGDPLLQTIWGHALGRFVYGVFSGLGFAWLLTDRRMYQPKQQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25698; Mature: 25567
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSPTLCATCKQKPPLWDMMYCAECYQRQLFRQRLGLWGLWMVISVLEMLLNIGVGVVA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VSSELAQESSLISLIFSGVMVINSILALCVGVAQTALMKKKIKRWLLWGIAGGLEVLFFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSMLAYQQFGQVAHLLIFTMACSGICLAIIQSSLMIGQVAQPWRWILVSIGSWSVASLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHH ALLLENQFGDPLLQTIWGHALGRFVYGVFSGLGFAWLLTDRRMYQPKQQL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNSPTLCATCKQKPPLWDMMYCAECYQRQLFRQRLGLWGLWMVISVLEMLLNIGVGVVA CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VSSELAQESSLISLIFSGVMVINSILALCVGVAQTALMKKKIKRWLLWGIAGGLEVLFFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSMLAYQQFGQVAHLLIFTMACSGICLAIIQSSLMIGQVAQPWRWILVSIGSWSVASLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHH ALLLENQFGDPLLQTIWGHALGRFVYGVFSGLGFAWLLTDRRMYQPKQQL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA