Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901180

Identifier: 159901180

GI number: 159901180

Start: 5965335

End: 5966135

Strand: Reverse

Name: 159901180

Synonym: Haur_4668

Alternate gene names: NA

Gene position: 5966135-5965335 (Counterclockwise)

Preceding gene: 159901181

Following gene: 159901178

Centisome position: 94.01

GC content: 52.43

Gene sequence:

>801_bases
ATGCAGATCAATGTAACCTACATCGGCACAGCCACGGTCTTGTTGGAAATTGACGGCCTGCGGATTTTGACCGATCCGGT
GTTTGATCCGGCTGGGAGTGCGCGGGTTTACCAGGTGCGGCCACAGGTTGAATTTGCGTTGTACAAGCAAACCCCAGCGG
CCTTGCCAGCAAGCGAAATTGGCGCGATTGATCTGGTTTTGCTCTCGCACGACGATCATTATGATAATTTGGATGATGCA
GGCCGCGCCTTGTTGCCGAACGCAGGCCATGTGTTGACCACCGAATCGGGCCGCCAGCGCTTGCAACAACAGGGCGCAAC
CAACGTGCAAGGCCTCGCCGAGTGGCAATCGATTACAGTTAACACGCCCCAAGACTTGCCGCTGACGATCACCGCCGTGC
CAGCCCAACATGGCCCGGTCGAGTTGCTACCGATTATTGGCGAGGTGATTGGCTTTGTGTTGGAATACCCAGCTTTTGAG
CATGGGCCAATTTATATTTCTGGCGACACCGTTTTGTTTGATGGAATTACGGCGATTGCTGAACGCTACGCGATTGGTAC
GGTCTTTTTGCATGTTGGGGCAGCCCAATTTGCGCCAACCGGCCCAACTTTATTTACCTTTGATGCAACTCAGGCCTATC
AAGCGGCGCAACTACTCAAGCCCCAAAGCTTGATTCCAATTCATTTTGATGGTTGGCAGCACTTTAGCCAAGGCCAAGCA
GAAATTGATCAAGCTTTTGCTGGGAGCGACATTCAACCACGTTGGCTGGATTTAGGGGTTGAAACTAAGCTAACGGTTTG
A

Upstream 100 bases:

>100_bases
CACCGCCCGCGCCGCCATCGACAATTTAATTGCCACCTATCGCAGCTAAAATTTTTTAGCATCAATAAAACACGAACGTC
CGTATTTATAAGGAGTTGTT

Downstream 100 bases:

>100_bases
GATTCTTTCACTCCCAGCCCTCATCTCGCGGATGGGAGAGAGGTTTATTACAATACAAGGGTAGCTTTTAAGACCCCTCA
CCCCTAGCCCCTCGCCCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQINVTYIGTATVLLEIDGLRILTDPVFDPAGSARVYQVRPQVEFALYKQTPAALPASEIGAIDLVLLSHDDHYDNLDDA
GRALLPNAGHVLTTESGRQRLQQQGATNVQGLAEWQSITVNTPQDLPLTITAVPAQHGPVELLPIIGEVIGFVLEYPAFE
HGPIYISGDTVLFDGITAIAERYAIGTVFLHVGAAQFAPTGPTLFTFDATQAYQAAQLLKPQSLIPIHFDGWQHFSQGQA
EIDQAFAGSDIQPRWLDLGVETKLTV

Sequences:

>Translated_266_residues
MQINVTYIGTATVLLEIDGLRILTDPVFDPAGSARVYQVRPQVEFALYKQTPAALPASEIGAIDLVLLSHDDHYDNLDDA
GRALLPNAGHVLTTESGRQRLQQQGATNVQGLAEWQSITVNTPQDLPLTITAVPAQHGPVELLPIIGEVIGFVLEYPAFE
HGPIYISGDTVLFDGITAIAERYAIGTVFLHVGAAQFAPTGPTLFTFDATQAYQAAQLLKPQSLIPIHFDGWQHFSQGQA
EIDQAFAGSDIQPRWLDLGVETKLTV
>Mature_266_residues
MQINVTYIGTATVLLEIDGLRILTDPVFDPAGSARVYQVRPQVEFALYKQTPAALPASEIGAIDLVLLSHDDHYDNLDDA
GRALLPNAGHVLTTESGRQRLQQQGATNVQGLAEWQSITVNTPQDLPLTITAVPAQHGPVELLPIIGEVIGFVLEYPAFE
HGPIYISGDTVLFDGITAIAERYAIGTVFLHVGAAQFAPTGPTLFTFDATQAYQAAQLLKPQSLIPIHFDGWQHFSQGQA
EIDQAFAGSDIQPRWLDLGVETKLTV

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28806; Mature: 28806

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINVTYIGTATVLLEIDGLRILTDPVFDPAGSARVYQVRPQVEFALYKQTPAALPASEI
CEEEEEEEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCC
GAIDLVLLSHDDHYDNLDDAGRALLPNAGHVLTTESGRQRLQQQGATNVQGLAEWQSITV
CEEEEEEEECCCCCCCCCCCCCEECCCCCEEEECHHHHHHHHHCCCCCCCHHHCEEEEEE
NTPQDLPLTITAVPAQHGPVELLPIIGEVIGFVLEYPAFEHGPIYISGDTVLFDGITAIA
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEHHHHHHH
ERYAIGTVFLHVGAAQFAPTGPTLFTFDATQAYQAAQLLKPQSLIPIHFDGWQHFSQGQA
HHHHHEEEEEEECCHHCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHCCCHH
EIDQAFAGSDIQPRWLDLGVETKLTV
HHHHHHCCCCCCCCEEECCCEEEECC
>Mature Secondary Structure
MQINVTYIGTATVLLEIDGLRILTDPVFDPAGSARVYQVRPQVEFALYKQTPAALPASEI
CEEEEEEEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCC
GAIDLVLLSHDDHYDNLDDAGRALLPNAGHVLTTESGRQRLQQQGATNVQGLAEWQSITV
CEEEEEEEECCCCCCCCCCCCCEECCCCCEEEECHHHHHHHHHCCCCCCCHHHCEEEEEE
NTPQDLPLTITAVPAQHGPVELLPIIGEVIGFVLEYPAFEHGPIYISGDTVLFDGITAIA
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEHHHHHHH
ERYAIGTVFLHVGAAQFAPTGPTLFTFDATQAYQAAQLLKPQSLIPIHFDGWQHFSQGQA
HHHHHEEEEEEECCHHCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHCCCHH
EIDQAFAGSDIQPRWLDLGVETKLTV
HHHHHHCCCCCCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA