Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901178

Identifier: 159901178

GI number: 159901178

Start: 5963829

End: 5964299

Strand: Reverse

Name: 159901178

Synonym: Haur_4666

Alternate gene names: NA

Gene position: 5964299-5963829 (Counterclockwise)

Preceding gene: 159901180

Following gene: 159901177

Centisome position: 93.98

GC content: 53.5

Gene sequence:

>471_bases
ATGAAGGTTAGCCTCAATCGTCGCTGGTTCCCGTTGTTGGGAGCTTTTGCTGCCTACATCGCTTGGGATCTCGTCGATCA
TCAAGTTCTCACGCCGCGCTCGCCAGTGTGGCTGTGTTATTTGATCGATTGGGGCGTGGCTGGGATGGCAGGTTGGTCGA
TTTTTATCCTGCTCGAACGCCAATATCAGCATAAAAAACCGCTGATCGATGCCAGCACGATCAACTTGCCGCCAGCGGTA
TTTGCCCAATTAACCCAAGCCGCCCAAGGCTTGCAGGGCGAAATTCACGAGCTGCAACAAGCAATCGGCAATTCAATCAA
CGAAGAGGGCATTCAACAGCAGCGCAGCTTGCGGCAGGCTTTGGTTGCCAGCTATCGGGCGCAGGCAATTCTTGAGGAAG
TTAGCGGTATAGTCGATAAGCCGCAAGTTGCTCCGCCGCCAGTTGAACAATTGATCACCCAGCGCTCTTAG

Upstream 100 bases:

>100_bases
CCATCTCATCAAATTTTCATCAGAATTTCAGATTAGCGCAGCATACTAGATTGGCCTGAATCATTGTTCAGGCATTAATT
TGTGAAATGGATGCGCAATT

Downstream 100 bases:

>100_bases
GCTGTGGTAGCATAACGATCATATTTTGCTACGAGGCCGCTGATGATTGCGATCGATGCTCGTTTGAATGCCTACCGCCA
TGGTGGCATTGCCCAATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKVSLNRRWFPLLGAFAAYIAWDLVDHQVLTPRSPVWLCYLIDWGVAGMAGWSIFILLERQYQHKKPLIDASTINLPPAV
FAQLTQAAQGLQGEIHELQQAIGNSINEEGIQQQRSLRQALVASYRAQAILEEVSGIVDKPQVAPPPVEQLITQRS

Sequences:

>Translated_156_residues
MKVSLNRRWFPLLGAFAAYIAWDLVDHQVLTPRSPVWLCYLIDWGVAGMAGWSIFILLERQYQHKKPLIDASTINLPPAV
FAQLTQAAQGLQGEIHELQQAIGNSINEEGIQQQRSLRQALVASYRAQAILEEVSGIVDKPQVAPPPVEQLITQRS
>Mature_156_residues
MKVSLNRRWFPLLGAFAAYIAWDLVDHQVLTPRSPVWLCYLIDWGVAGMAGWSIFILLERQYQHKKPLIDASTINLPPAV
FAQLTQAAQGLQGEIHELQQAIGNSINEEGIQQQRSLRQALVASYRAQAILEEVSGIVDKPQVAPPPVEQLITQRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17452; Mature: 17452

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSLNRRWFPLLGAFAAYIAWDLVDHQVLTPRSPVWLCYLIDWGVAGMAGWSIFILLER
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHH
QYQHKKPLIDASTINLPPAVFAQLTQAAQGLQGEIHELQQAIGNSINEEGIQQQRSLRQA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LVASYRAQAILEEVSGIVDKPQVAPPPVEQLITQRS
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MKVSLNRRWFPLLGAFAAYIAWDLVDHQVLTPRSPVWLCYLIDWGVAGMAGWSIFILLER
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHH
QYQHKKPLIDASTINLPPAVFAQLTQAAQGLQGEIHELQQAIGNSINEEGIQQQRSLRQA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LVASYRAQAILEEVSGIVDKPQVAPPPVEQLITQRS
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA