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The map label for this gene is 159901181

Identifier: 159901181

GI number: 159901181

Start: 5966187

End: 5966780

Strand: Reverse

Name: 159901181

Synonym: Haur_4669

Alternate gene names: NA

Gene position: 5966780-5966187 (Counterclockwise)

Preceding gene: 159901183

Following gene: 159901180

Centisome position: 94.02

GC content: 52.02

Gene sequence:

>594_bases
ATGAGTCGCAAAGATAGTGCCAAAGAACTTATTTTGAATAAAGCAGTGCAGATGGCTTCGGTTGCTGGCCTGAATGGCTT
GACGATTGGGAGCTTGGCTGAGGCTGTCGCCATGTCCAAGGGCGGTATCAGCGCTCACTTCAAATCGAAGACTGAACTGC
AAGTTGCGGCGGTTGATCGCGCCTCTGAGCTGTTTCAAGCAGCGGTGATTGGTCAAGTGCTGGCCGAGCCAGCTGGAATT
GCCCGCCTTAGCAAGCTTTGCGATTCGTGGTTTAGCTATTTGCAGCAGGGCATTTTTCTAGGCGGCTGTTTTTTTACCAA
CGCTGTGCTTGAGCTTGATGATTTGGATAACTCGGAAGTGCGGGCGGCTGTGCTGCGCTATTATCATAATTATCTAAATT
TTATTGAGCAATGCATCGCCGAAACCGTGCAGCTCGGCCAGTTTCGCCACGATACGCCAATTGCCGAGGTTGCGCTGCAA
TTCCATGGCATCGAAATCGCCGCGCTGGTTTGGCGAGCAGTGCGTTCTCACGAAGCTCAATTTGCCACCGCCCGCGCCGC
CATCGACAATTTAATTGCCACCTATCGCAGCTAA

Upstream 100 bases:

>100_bases
TCCTTCGCGTTCTTCGTGCCCTTCGTGGCTCCATAGTTCATCTTTGGAGCACCGAAGATTCATGCTTGCATAAAATACGA
ACGTATGGTATTTTATCAAT

Downstream 100 bases:

>100_bases
AATTTTTTAGCATCAATAAAACACGAACGTCCGTATTTATAAGGAGTTGTTATGCAGATCAATGTAACCTACATCGGCAC
AGCCACGGTCTTGTTGGAAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSRKDSAKELILNKAVQMASVAGLNGLTIGSLAEAVAMSKGGISAHFKSKTELQVAAVDRASELFQAAVIGQVLAEPAGI
ARLSKLCDSWFSYLQQGIFLGGCFFTNAVLELDDLDNSEVRAAVLRYYHNYLNFIEQCIAETVQLGQFRHDTPIAEVALQ
FHGIEIAALVWRAVRSHEAQFATARAAIDNLIATYRS

Sequences:

>Translated_197_residues
MSRKDSAKELILNKAVQMASVAGLNGLTIGSLAEAVAMSKGGISAHFKSKTELQVAAVDRASELFQAAVIGQVLAEPAGI
ARLSKLCDSWFSYLQQGIFLGGCFFTNAVLELDDLDNSEVRAAVLRYYHNYLNFIEQCIAETVQLGQFRHDTPIAEVALQ
FHGIEIAALVWRAVRSHEAQFATARAAIDNLIATYRS
>Mature_196_residues
SRKDSAKELILNKAVQMASVAGLNGLTIGSLAEAVAMSKGGISAHFKSKTELQVAAVDRASELFQAAVIGQVLAEPAGIA
RLSKLCDSWFSYLQQGIFLGGCFFTNAVLELDDLDNSEVRAAVLRYYHNYLNFIEQCIAETVQLGQFRHDTPIAEVALQF
HGIEIAALVWRAVRSHEAQFATARAAIDNLIATYRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21449; Mature: 21318

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKDSAKELILNKAVQMASVAGLNGLTIGSLAEAVAMSKGGISAHFKSKTELQVAAVDR
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHH
ASELFQAAVIGQVLAEPAGIARLSKLCDSWFSYLQQGIFLGGCFFTNAVLELDDLDNSEV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RAAVLRYYHNYLNFIEQCIAETVQLGQFRHDTPIAEVALQFHGIEIAALVWRAVRSHEAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FATARAAIDNLIATYRS
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRKDSAKELILNKAVQMASVAGLNGLTIGSLAEAVAMSKGGISAHFKSKTELQVAAVDR
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHH
ASELFQAAVIGQVLAEPAGIARLSKLCDSWFSYLQQGIFLGGCFFTNAVLELDDLDNSEV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RAAVLRYYHNYLNFIEQCIAETVQLGQFRHDTPIAEVALQFHGIEIAALVWRAVRSHEAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FATARAAIDNLIATYRS
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA