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The map label for this gene is yebA [C]

Identifier: 159900986

GI number: 159900986

Start: 5718184

End: 5720076

Strand: Reverse

Name: yebA [C]

Synonym: Haur_4473

Alternate gene names: 159900986

Gene position: 5720076-5718184 (Counterclockwise)

Preceding gene: 159900987

Following gene: 159900985

Centisome position: 90.13

GC content: 53.41

Gene sequence:

>1893_bases
ATGCAACGTTTTAACCCCAAACGCTATTTCGATTTACGCAATCGGCTGCAAAGCGATCAACAGCGCCTCTGGGCTTTGTT
CAGCACTTTAATCATCAGTTTGTTGTTAACGACGCTGGTGCTACGGATTGCCCCACCTGCCACTGAAACTGGGCGCTTGA
TTTTTCGGCCTGTTGATTCGGTGACGGAGGACGACCGCACCCAAGCCGAACAACCACCACCAACACTGCCCCCAGCGATC
GAACCGCAAAATCTGGTTGATGCAAGCGCGATCTTGCCCCGTTCTGCCGAAGCGCCAACAATCATCGATGATATTCGCTT
TACATCCGAGCAAAATCTGACTGTCGCCAATATTCAAACGTTGTTAGATGCACAGCCTGGCACGCTCAAAGCCGCCTTGG
TAACAGTTGGCGATCGCAATTTATCGCTGGCCGAGGTGGTGGTTGGCCAAGCCTATTTGTATAGTCTTAATCCCAAATTG
CTGCTGGCCTTGCTCGAATTTCAACAAGGCCTGCTGACCAACCCAACCCCCAACCCTGATCAACTCGATTGGGCCATGAA
ATATCAGGGCGAGGATGAAAAATGGCGCGGCTTGCATGGCCAAATTCGTTGGGCCGCCCGTGAATTGCGGCGGGGTGTGC
GTGATTTCGCCTATGTTACCGAGTTGCAATATCGCGATAAAGATGTCAAAGGCCCAATTCCAGCTGGTTTAAACCCAAGC
TCGTATGCAGTGATACGGGTGCTGGCTCAAACCATGACTCCCGAAGAATTGGCGAAAGTGCTCAGCGATGGCAGTTTTGT
CGCAACCTACAGCAAGTTTTTCGAAGATCCCCGTCAAACGTTGGGCCAAGTACCAGCGCCAGCAACGCCATTTTTACGTT
GGCCGCTACGCAATGTCACCTATATCACTTCGTTTTTTGATCACGAATATCCCTTTCTAACGCCCAATCAATCCTTGGTG
AGTTGGTGGGGGCGACGTGAAACCGAGCTTTCCTATGATGGTCACGATGGCTGGGATTATGGCGCACGACCGCCCGAAGC
AGTGGTTGCCGCCGCTGATGGCACGGTGGTTTGGGCCAGCAATTCTGATGATGGTTGTGGTGTGCCAGCCAAAGGCGTGG
TGCTTGATCATGGCAATGGCTATCGCACGCTCTATTGGCATCTGAGCGAAATTTCGGTCGAGCTTGGCCAATCGATCAAA
GGCGGCGAACAATTGGGCATCGTTGGCTCAACTGGCTGTGCGATCGGCCCACACTTGCACTTTCAAACCCAATACCTTGG
CCGCAACACCGATCCGTATGGTTGGTGCTCAAGCGAACCCGACCCATGGAGCAGCTATCCAGTTGGCACAGCTTCGCGCT
GGCTTTGGGCCGATCGCCCGAATCCTTGCGATCTTGGGCAAACCATCGCAGTGCGGCCAAGCGATCAAGGATTTAGTCGC
AGCGAAGGCAATTGGCAAAATGCCCCAATCGGTGCTGGTGGCGAAACCCTTTGGATTACCTCGCAAATTCCCATAACAAC
CACTGAAACCCTAACCGACACAATGTCGGATTTGGCAGGCGTTGCCACGCCTCAACCAACGCCAAGCCAACCACCAAGCA
CCGCTACCTGGCAAACCAGCATTCCCAGCGCTGGGCGTTATCGTGTGCTAACGTATATTCCCTACTACTACAACGGCCAC
GATGATGCTGTTGCCGCCCATTATGTGATTGAACACGCCGAAGGTCGCAGCGATGTGGTAGTCAATCAGTTTGTGTATGC
CAACGAATGGGCTGATCTTGGCACCTACACCTTCGACCCTAGCAAACCGGCCAAGGTCGAGCTAAGCAACGAAACCAGCA
TGGCCGACCAAGGGATCTGGGTTGGCACAACCGTTTGGCTGCCTGCCGATTGA

Upstream 100 bases:

>100_bases
ATGCCGATCGCACATTGCACTTTAGGGGTAGAGTGATCCATGCTGTACGCCAAACATTCGACATCTGCTATACTGGCAAG
GCGAATGCTTGGTGAGGATT

Downstream 100 bases:

>100_bases
CAATCCATTCTAATAATGATACATTATATCAATATTATGGTCGTGCAAAGCGCGGCCAATTTTTTGGCAATTTTATAATG
ATATATAGTATCAATATGAA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MQRFNPKRYFDLRNRLQSDQQRLWALFSTLIISLLLTTLVLRIAPPATETGRLIFRPVDSVTEDDRTQAEQPPPTLPPAI
EPQNLVDASAILPRSAEAPTIIDDIRFTSEQNLTVANIQTLLDAQPGTLKAALVTVGDRNLSLAEVVVGQAYLYSLNPKL
LLALLEFQQGLLTNPTPNPDQLDWAMKYQGEDEKWRGLHGQIRWAARELRRGVRDFAYVTELQYRDKDVKGPIPAGLNPS
SYAVIRVLAQTMTPEELAKVLSDGSFVATYSKFFEDPRQTLGQVPAPATPFLRWPLRNVTYITSFFDHEYPFLTPNQSLV
SWWGRRETELSYDGHDGWDYGARPPEAVVAAADGTVVWASNSDDGCGVPAKGVVLDHGNGYRTLYWHLSEISVELGQSIK
GGEQLGIVGSTGCAIGPHLHFQTQYLGRNTDPYGWCSSEPDPWSSYPVGTASRWLWADRPNPCDLGQTIAVRPSDQGFSR
SEGNWQNAPIGAGGETLWITSQIPITTTETLTDTMSDLAGVATPQPTPSQPPSTATWQTSIPSAGRYRVLTYIPYYYNGH
DDAVAAHYVIEHAEGRSDVVVNQFVYANEWADLGTYTFDPSKPAKVELSNETSMADQGIWVGTTVWLPAD

Sequences:

>Translated_630_residues
MQRFNPKRYFDLRNRLQSDQQRLWALFSTLIISLLLTTLVLRIAPPATETGRLIFRPVDSVTEDDRTQAEQPPPTLPPAI
EPQNLVDASAILPRSAEAPTIIDDIRFTSEQNLTVANIQTLLDAQPGTLKAALVTVGDRNLSLAEVVVGQAYLYSLNPKL
LLALLEFQQGLLTNPTPNPDQLDWAMKYQGEDEKWRGLHGQIRWAARELRRGVRDFAYVTELQYRDKDVKGPIPAGLNPS
SYAVIRVLAQTMTPEELAKVLSDGSFVATYSKFFEDPRQTLGQVPAPATPFLRWPLRNVTYITSFFDHEYPFLTPNQSLV
SWWGRRETELSYDGHDGWDYGARPPEAVVAAADGTVVWASNSDDGCGVPAKGVVLDHGNGYRTLYWHLSEISVELGQSIK
GGEQLGIVGSTGCAIGPHLHFQTQYLGRNTDPYGWCSSEPDPWSSYPVGTASRWLWADRPNPCDLGQTIAVRPSDQGFSR
SEGNWQNAPIGAGGETLWITSQIPITTTETLTDTMSDLAGVATPQPTPSQPPSTATWQTSIPSAGRYRVLTYIPYYYNGH
DDAVAAHYVIEHAEGRSDVVVNQFVYANEWADLGTYTFDPSKPAKVELSNETSMADQGIWVGTTVWLPAD
>Mature_630_residues
MQRFNPKRYFDLRNRLQSDQQRLWALFSTLIISLLLTTLVLRIAPPATETGRLIFRPVDSVTEDDRTQAEQPPPTLPPAI
EPQNLVDASAILPRSAEAPTIIDDIRFTSEQNLTVANIQTLLDAQPGTLKAALVTVGDRNLSLAEVVVGQAYLYSLNPKL
LLALLEFQQGLLTNPTPNPDQLDWAMKYQGEDEKWRGLHGQIRWAARELRRGVRDFAYVTELQYRDKDVKGPIPAGLNPS
SYAVIRVLAQTMTPEELAKVLSDGSFVATYSKFFEDPRQTLGQVPAPATPFLRWPLRNVTYITSFFDHEYPFLTPNQSLV
SWWGRRETELSYDGHDGWDYGARPPEAVVAAADGTVVWASNSDDGCGVPAKGVVLDHGNGYRTLYWHLSEISVELGQSIK
GGEQLGIVGSTGCAIGPHLHFQTQYLGRNTDPYGWCSSEPDPWSSYPVGTASRWLWADRPNPCDLGQTIAVRPSDQGFSR
SEGNWQNAPIGAGGETLWITSQIPITTTETLTDTMSDLAGVATPQPTPSQPPSTATWQTSIPSAGRYRVLTYIPYYYNGH
DDAVAAHYVIEHAEGRSDVVVNQFVYANEWADLGTYTFDPSKPAKVELSNETSMADQGIWVGTTVWLPAD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=89, Percent_Identity=37.0786516853933, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 69785; Mature: 69785

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFNPKRYFDLRNRLQSDQQRLWALFSTLIISLLLTTLVLRIAPPATETGRLIFRPVDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
VTEDDRTQAEQPPPTLPPAIEPQNLVDASAILPRSAEAPTIIDDIRFTSEQNLTVANIQT
CCCCCHHHCCCCCCCCCCCCCCCHHCCHHHHCCCCCCCCEEHHHHEECCCCCEEHHHHHH
LLDAQPGTLKAALVTVGDRNLSLAEVVVGQAYLYSLNPKLLLALLEFQQGLLTNPTPNPD
HHCCCCCCEEEEEEEECCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCC
QLDWAMKYQGEDEKWRGLHGQIRWAARELRRGVRDFAYVTELQYRDKDVKGPIPAGLNPS
CEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SYAVIRVLAQTMTPEELAKVLSDGSFVATYSKFFEDPRQTLGQVPAPATPFLRWPLRNVT
HHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHH
YITSFFDHEYPFLTPNQSLVSWWGRRETELSYDGHDGWDYGARPPEAVVAAADGTVVWAS
HHHHHHCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHEEEECCCEEEEEC
NSDDGCGVPAKGVVLDHGNGYRTLYWHLSEISVELGQSIKGGEQLGIVGSTGCAIGPHLH
CCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEE
FQTQYLGRNTDPYGWCSSEPDPWSSYPVGTASRWLWADRPNPCDLGQTIAVRPSDQGFSR
EEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCC
SEGNWQNAPIGAGGETLWITSQIPITTTETLTDTMSDLAGVATPQPTPSQPPSTATWQTS
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
IPSAGRYRVLTYIPYYYNGHDDAVAAHYVIEHAEGRSDVVVNQFVYANEWADLGTYTFDP
CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEECC
SKPAKVELSNETSMADQGIWVGTTVWLPAD
CCCCEEEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQRFNPKRYFDLRNRLQSDQQRLWALFSTLIISLLLTTLVLRIAPPATETGRLIFRPVDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
VTEDDRTQAEQPPPTLPPAIEPQNLVDASAILPRSAEAPTIIDDIRFTSEQNLTVANIQT
CCCCCHHHCCCCCCCCCCCCCCCHHCCHHHHCCCCCCCCEEHHHHEECCCCCEEHHHHHH
LLDAQPGTLKAALVTVGDRNLSLAEVVVGQAYLYSLNPKLLLALLEFQQGLLTNPTPNPD
HHCCCCCCEEEEEEEECCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCC
QLDWAMKYQGEDEKWRGLHGQIRWAARELRRGVRDFAYVTELQYRDKDVKGPIPAGLNPS
CEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SYAVIRVLAQTMTPEELAKVLSDGSFVATYSKFFEDPRQTLGQVPAPATPFLRWPLRNVT
HHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHH
YITSFFDHEYPFLTPNQSLVSWWGRRETELSYDGHDGWDYGARPPEAVVAAADGTVVWAS
HHHHHHCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHEEEECCCEEEEEC
NSDDGCGVPAKGVVLDHGNGYRTLYWHLSEISVELGQSIKGGEQLGIVGSTGCAIGPHLH
CCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEE
FQTQYLGRNTDPYGWCSSEPDPWSSYPVGTASRWLWADRPNPCDLGQTIAVRPSDQGFSR
EEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCC
SEGNWQNAPIGAGGETLWITSQIPITTTETLTDTMSDLAGVATPQPTPSQPPSTATWQTS
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
IPSAGRYRVLTYIPYYYNGHDDAVAAHYVIEHAEGRSDVVVNQFVYANEWADLGTYTFDP
CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEECC
SKPAKVELSNETSMADQGIWVGTTVWLPAD
CCCCEEEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]