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The map label for this gene is 159900987

Identifier: 159900987

GI number: 159900987

Start: 5720501

End: 5721316

Strand: Reverse

Name: 159900987

Synonym: Haur_4474

Alternate gene names: NA

Gene position: 5721316-5720501 (Counterclockwise)

Preceding gene: 159900988

Following gene: 159900986

Centisome position: 90.15

GC content: 34.93

Gene sequence:

>816_bases
ATGACTATTCTGCAAAAAGTTGATCAAGCAACTATCTATGTTTATGTAACCGATACTAAGATAATGCGGCCCATAAATCA
AGGATATCAGAAATTAATAGTCCATTACGTTTATACTACAAAAGTAAGAAACTATCTAGTTATCGCATATAAAGAAAAAG
GCTATAAAAAAGAAAGATTCATAGATGATAATAGTACAGCAGTAATTGTAAAAGACTGGGATACTCCTGATTTACCAGAT
AATCTGAAAATTATTCAAAGTGATGAAATTACGTCAACATATGAAATGAGATATGGTTTCAATTCTAATGAATGGATTGA
AGAATTTAATTCGATTATTGACCCTTGGATACAATCAAATCCTGAACGCCTTATCCTAGATCTACGAAAACAATCTATAC
AAAATGTATCTACTGTCGAAGAAGATTGGTCAGCTGCAATCCAAGCAAATTTGTTTGACTTACCATCAACACAACCTCAC
CAACCAATAGCAAGCCCTGAGATTTTCATTGAGGGGGCAGAATATCAATCATTAGTAACTCGTTATGAGCGAAATCCCGA
AGCCCGTCAACGTTGTATTGAGCACTATGGATCAACTTGTGTTATTTGCCATTTCGATTTTGCCAAAGTTTATGGAGAGT
TAGCAAAAGGATTTATTCATGTCCATCATCTTAAGCCACTAGCTACTATTGGCGAAAACTACGAAGTTAATCCCATTGAT
GATTTGCGCCCTGTATGTCCGAATTGTCATGCTGTGATTCATATGCGCAAAGAACCATATACGATTGATGAAGTTCGTAA
CATGCTTCAACATTAA

Upstream 100 bases:

>100_bases
CCCAAGAACATAGAGCATAGAACATAGGGCATAGATTATGCTTGGTTCTATGCTCTATTTAGTTTAAGCAATATCCTTCT
GATTGTAGGAGTTGTTTTAT

Downstream 100 bases:

>100_bases
TCTGAATATTAGTCATAGCCCAATATCATGATTGAATGGTAGATATTTTTGTATTCTCAATAATTAAGCACATTGTTGCC
TGATCTATTACACATCTATA

Product: HNH endonuclease

Products: NA

Alternate protein names: Restriction Endonuclease-Like Protein; 5-Methylcytosine-Specific Restriction A; Endonuclease; HNH Endonuclease Family Protein; Restriction Endonuclease; Hnh Endonuclease; Endonuclease-Like Protein

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTILQKVDQATIYVYVTDTKIMRPINQGYQKLIVHYVYTTKVRNYLVIAYKEKGYKKERFIDDNSTAVIVKDWDTPDLPD
NLKIIQSDEITSTYEMRYGFNSNEWIEEFNSIIDPWIQSNPERLILDLRKQSIQNVSTVEEDWSAAIQANLFDLPSTQPH
QPIASPEIFIEGAEYQSLVTRYERNPEARQRCIEHYGSTCVICHFDFAKVYGELAKGFIHVHHLKPLATIGENYEVNPID
DLRPVCPNCHAVIHMRKEPYTIDEVRNMLQH

Sequences:

>Translated_271_residues
MTILQKVDQATIYVYVTDTKIMRPINQGYQKLIVHYVYTTKVRNYLVIAYKEKGYKKERFIDDNSTAVIVKDWDTPDLPD
NLKIIQSDEITSTYEMRYGFNSNEWIEEFNSIIDPWIQSNPERLILDLRKQSIQNVSTVEEDWSAAIQANLFDLPSTQPH
QPIASPEIFIEGAEYQSLVTRYERNPEARQRCIEHYGSTCVICHFDFAKVYGELAKGFIHVHHLKPLATIGENYEVNPID
DLRPVCPNCHAVIHMRKEPYTIDEVRNMLQH
>Mature_270_residues
TILQKVDQATIYVYVTDTKIMRPINQGYQKLIVHYVYTTKVRNYLVIAYKEKGYKKERFIDDNSTAVIVKDWDTPDLPDN
LKIIQSDEITSTYEMRYGFNSNEWIEEFNSIIDPWIQSNPERLILDLRKQSIQNVSTVEEDWSAAIQANLFDLPSTQPHQ
PIASPEIFIEGAEYQSLVTRYERNPEARQRCIEHYGSTCVICHFDFAKVYGELAKGFIHVHHLKPLATIGENYEVNPIDD
LRPVCPNCHAVIHMRKEPYTIDEVRNMLQH

Specific function: Unknown

COG id: COG3183

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31670; Mature: 31539

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILQKVDQATIYVYVTDTKIMRPINQGYQKLIVHYVYTTKVRNYLVIAYKEKGYKKERF
CCHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHE
IDDNSTAVIVKDWDTPDLPDNLKIIQSDEITSTYEMRYGFNSNEWIEEFNSIIDPWIQSN
ECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
PERLILDLRKQSIQNVSTVEEDWSAAIQANLFDLPSTQPHQPIASPEIFIEGAEYQSLVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCHHHHHHH
RYERNPEARQRCIEHYGSTCVICHFDFAKVYGELAKGFIHVHHLKPLATIGENYEVNPID
HHCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHEEHHHCCHHHHCCCCCCCCCCH
DLRPVCPNCHAVIHMRKEPYTIDEVRNMLQH
HCCCCCCCCEEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TILQKVDQATIYVYVTDTKIMRPINQGYQKLIVHYVYTTKVRNYLVIAYKEKGYKKERF
CHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHE
IDDNSTAVIVKDWDTPDLPDNLKIIQSDEITSTYEMRYGFNSNEWIEEFNSIIDPWIQSN
ECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
PERLILDLRKQSIQNVSTVEEDWSAAIQANLFDLPSTQPHQPIASPEIFIEGAEYQSLVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCHHHHHHH
RYERNPEARQRCIEHYGSTCVICHFDFAKVYGELAKGFIHVHHLKPLATIGENYEVNPID
HHCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHEEHHHCCHHHHCCCCCCCCCCH
DLRPVCPNCHAVIHMRKEPYTIDEVRNMLQH
HCCCCCCCCEEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA