| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900985
Identifier: 159900985
GI number: 159900985
Start: 5717495
End: 5718088
Strand: Reverse
Name: 159900985
Synonym: Haur_4472
Alternate gene names: NA
Gene position: 5718088-5717495 (Counterclockwise)
Preceding gene: 159900986
Following gene: 159900979
Centisome position: 90.1
GC content: 54.04
Gene sequence:
>594_bases ATGAAGCAAAATAGTCCAAATTATCAATTACCCAAGGCTGTGCATCAAGCGGGCCGGCCACTATTCGAGCAACAATGTTG GTGTTGGGGCCACGATGTGCGCCGTTGCGCAGGCAATTTGCTGCTGGAATATGGGGCAACGCGCAGCCGTGTGCCAGCCG AACAACGGGGCAGCAGCAATTATCATTTTCAATTGAACTGTGGAGCGAGGATGGGTTTGTGGGGTTGGGGCTTGTGGTAT GGCGATGGCTATGCGCCAAGCCTATTTCTGCGCCGCGATAAACTGCAAGTTGGCTTGATCGAGCGGGCAGCGCCGCTGTG TGATGTTTGGTCGCTAAGCCAAATTCCAGCCGTGCGAGCGCCACATAATTGGGCTGAATGGCTGCGCATGACTAGCTTGC TCGGTCATTGCTGCACATGGATTGCCGCCTACGAGCAGTGGGTGATTGAGCAAGCAGGATTAACCTATCGCCAAGCCTGT ATTGCCGATTGGCAGAAACCAGCCTTGCCCGCCCACGAAATGGCTGAGCGCTGGCAACAACTAAACGATTTAATTATTGC CAGCCAAGAAAACCTCAGCCTAGCTGCGGGTTAG
Upstream 100 bases:
>100_bases ATTGACAATCCATTCTAATAATGATACATTATATCAATATTATGGTCGTGCAAAGCGCGGCCAATTTTTTGGCAATTTTA TAATGATATATAGTATCAAT
Downstream 100 bases:
>100_bases GCTTGTTCGGCCAGCGATTGAGCTGCTTGTAAGGTGTTTTGCAGCAACATCATATTGGTAACCGGGCCAGTGCCGCCTGG TACCGGGGTAATTGCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKQNSPNYQLPKAVHQAGRPLFEQQCWCWGHDVRRCAGNLLLEYGATRSRVPAEQRGSSNYHFQLNCGARMGLWGWGLWY GDGYAPSLFLRRDKLQVGLIERAAPLCDVWSLSQIPAVRAPHNWAEWLRMTSLLGHCCTWIAAYEQWVIEQAGLTYRQAC IADWQKPALPAHEMAERWQQLNDLIIASQENLSLAAG
Sequences:
>Translated_197_residues MKQNSPNYQLPKAVHQAGRPLFEQQCWCWGHDVRRCAGNLLLEYGATRSRVPAEQRGSSNYHFQLNCGARMGLWGWGLWY GDGYAPSLFLRRDKLQVGLIERAAPLCDVWSLSQIPAVRAPHNWAEWLRMTSLLGHCCTWIAAYEQWVIEQAGLTYRQAC IADWQKPALPAHEMAERWQQLNDLIIASQENLSLAAG >Mature_197_residues MKQNSPNYQLPKAVHQAGRPLFEQQCWCWGHDVRRCAGNLLLEYGATRSRVPAEQRGSSNYHFQLNCGARMGLWGWGLWY GDGYAPSLFLRRDKLQVGLIERAAPLCDVWSLSQIPAVRAPHNWAEWLRMTSLLGHCCTWIAAYEQWVIEQAGLTYRQAC IADWQKPALPAHEMAERWQQLNDLIIASQENLSLAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22479; Mature: 22479
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNSPNYQLPKAVHQAGRPLFEQQCWCWGHDVRRCAGNLLLEYGATRSRVPAEQRGSSN CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC YHFQLNCGARMGLWGWGLWYGDGYAPSLFLRRDKLQVGLIERAAPLCDVWSLSQIPAVRA EEEEEECCCEECCCCCHHEECCCCCCHHHEECCCHHHHHHHHCCCHHHHHHHHCCCCCCC PHNWAEWLRMTSLLGHCCTWIAAYEQWVIEQAGLTYRQACIADWQKPALPAHEMAERWQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH LNDLIIASQENLSLAAG HHHHEEECCCCCEECCC >Mature Secondary Structure MKQNSPNYQLPKAVHQAGRPLFEQQCWCWGHDVRRCAGNLLLEYGATRSRVPAEQRGSSN CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC YHFQLNCGARMGLWGWGLWYGDGYAPSLFLRRDKLQVGLIERAAPLCDVWSLSQIPAVRA EEEEEECCCEECCCCCHHEECCCCCCHHHEECCCHHHHHHHHCCCHHHHHHHHCCCCCCC PHNWAEWLRMTSLLGHCCTWIAAYEQWVIEQAGLTYRQACIADWQKPALPAHEMAERWQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH LNDLIIASQENLSLAAG HHHHEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA