| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900790
Identifier: 159900790
GI number: 159900790
Start: 5460973
End: 5462634
Strand: Direct
Name: 159900790
Synonym: Haur_4277
Alternate gene names: NA
Gene position: 5460973-5462634 (Clockwise)
Preceding gene: 159900789
Following gene: 159900791
Centisome position: 86.05
GC content: 49.22
Gene sequence:
>1662_bases ATGAAAGTTTCAGTTAAAGCCATTCGAGGGTTGATTATTGCGGTCAGCGTATGTGGCCTACTTTTGCGGCTGATTTTTGC GCTCTTGCCCTTGCAAACCCATTTGCTGGTGCTCGAAGATGATGCTTGGATGGTGACGGCCATTGCCCGCAATTGGGCCA TGGGCCAAGGGATCACCGCCGATGGTATCACGCCAACCAATGGATTTCATCCGGTGTATCCACTCACTTTAGGGGCGATT CCCTATGTTTTTGCCCCCGATAACTTAGCCTTAGGCTTTACTGTCAACTTGATTATCTGTGCATTGTTGGCCAGTTTAGT CATGTGGCCGTTGTGGCATTTGCTGAGACATTTGATGAACTGGCAAGCAAGTTTATTTGGCATAATCTTATATGCGCTAA ACCCCGTTTTAGTGCGGTTTACCGTCAATGGCATGGAAACGTCGATGGCTTTGTTGCTCTGGGTCACGACGCTGCTAGCT GCGGTCAAAATCGATCCCAAAAAATTAAGCCATAATCTCGGCCTTGCCGCACTAACGGCTGCCATGATTCTGACCCGCCT AGATGGAGCATTGCTCTTTGCCTCGATTGCCGCGGCTCGCTTGATTTGGGCTTGGCGAGCCAAACGCTTAGGCCGTGAAT TGCCCATGCTCACGAGCTATGTCGTGGTGACGTTTACGCTGTTAGTGCCCTATTTCTGGCGTAATTTGACGGTATTTGGT TCGTTTTCGCCCAGTAGTGGCAAAGCCTTGACCTACTTGCACAGCTACGTCAACTCCTACGCCATCTCAAATGGGCTTGA TGGTTGGTACGTTAATAGCGCAATTTCGATGGAAGTATTGGGACGCTCAGTAGTTGGCGCAGCGCTTTGTTTGGCCATTT TTGCGGCATTTGTGGGCTTTTGGGTTGGTCGTCAACTCTGGCTTGGCTTACCGCTCTTGCTCTATCTGCCGATTCCCTTG GTTTATTATGGCTATATGATGCAGCAGGATAATCCACGTCACTTTGTGCCTTGGTCGCTGGCAGTCATTATTTTGCTGGC ATGGGCGTTGGCGGCAATGCTCCAGCGTTTGCCATCGATCAGCTATCTGGCCGTGCCAGCGCTGATTGCGGGCGTGCTGA TTGTGCAAACCCTCGATAGCTCACGCTTTTGGCAAGAAAAAGCAACAGCGCCTAGTCAATCGCAACCAACGATGTATCAA GCAGCCTTGTGGATGCGCGATAATTTGCCCAGTGATGCCTTGATCGGGGCTAAAAATTCGGGCATTTATCAATATTATTC TGGTCATCATGTGCTGAATATCGATGGCAAATTGAACAACGACATTCTTGAGGTCTATGATCAACGGCGCATGCTCGATT ATTTGCGCGAAAAAGGCGTGACCCACTTGATCGATCAAGAGGGAACCATGGCCGATCATATTCAGTTTTATAGCTATCAA TTTGGTGAACGGCCCGAGCATCGTGTGCCCACAACCTTCACCCAATTCAAGATCTATGGTCAATTATTGCTGAGCAGTTT GGGGCTAGCCGATAAGCCAGCGCTTGATCGGCGCGATGGTTTTGAGCCAAATCAGCCATTTAGCAGCATCACCACGGTGA TTCAGCGCTTCCCACGGCCAAACGATAGCAATAACCCAATTGCGATTTTTGAACTTAACTAA
Upstream 100 bases:
>100_bases TATTTGATGCTAACTATCGGCTGATCGAAGCCAGCGGCGTTGAAGGCCGAGGCATTCGGATGTTTGTCCGCCGTGATAGT GGCCTATTTGAGCAAGCACA
Downstream 100 bases:
>100_bases AAAGGAATAGCTTTATGGCGCGATATTTAGTAACTGGTGGCGCAGGCTTTATTGGCTCGCATTTGGTTGATGCGCTCTTG CAACGCGGCGATGAGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKVSVKAIRGLIIAVSVCGLLLRLIFALLPLQTHLLVLEDDAWMVTAIARNWAMGQGITADGITPTNGFHPVYPLTLGAI PYVFAPDNLALGFTVNLIICALLASLVMWPLWHLLRHLMNWQASLFGIILYALNPVLVRFTVNGMETSMALLLWVTTLLA AVKIDPKKLSHNLGLAALTAAMILTRLDGALLFASIAAARLIWAWRAKRLGRELPMLTSYVVVTFTLLVPYFWRNLTVFG SFSPSSGKALTYLHSYVNSYAISNGLDGWYVNSAISMEVLGRSVVGAALCLAIFAAFVGFWVGRQLWLGLPLLLYLPIPL VYYGYMMQQDNPRHFVPWSLAVIILLAWALAAMLQRLPSISYLAVPALIAGVLIVQTLDSSRFWQEKATAPSQSQPTMYQ AALWMRDNLPSDALIGAKNSGIYQYYSGHHVLNIDGKLNNDILEVYDQRRMLDYLREKGVTHLIDQEGTMADHIQFYSYQ FGERPEHRVPTTFTQFKIYGQLLLSSLGLADKPALDRRDGFEPNQPFSSITTVIQRFPRPNDSNNPIAIFELN
Sequences:
>Translated_553_residues MKVSVKAIRGLIIAVSVCGLLLRLIFALLPLQTHLLVLEDDAWMVTAIARNWAMGQGITADGITPTNGFHPVYPLTLGAI PYVFAPDNLALGFTVNLIICALLASLVMWPLWHLLRHLMNWQASLFGIILYALNPVLVRFTVNGMETSMALLLWVTTLLA AVKIDPKKLSHNLGLAALTAAMILTRLDGALLFASIAAARLIWAWRAKRLGRELPMLTSYVVVTFTLLVPYFWRNLTVFG SFSPSSGKALTYLHSYVNSYAISNGLDGWYVNSAISMEVLGRSVVGAALCLAIFAAFVGFWVGRQLWLGLPLLLYLPIPL VYYGYMMQQDNPRHFVPWSLAVIILLAWALAAMLQRLPSISYLAVPALIAGVLIVQTLDSSRFWQEKATAPSQSQPTMYQ AALWMRDNLPSDALIGAKNSGIYQYYSGHHVLNIDGKLNNDILEVYDQRRMLDYLREKGVTHLIDQEGTMADHIQFYSYQ FGERPEHRVPTTFTQFKIYGQLLLSSLGLADKPALDRRDGFEPNQPFSSITTVIQRFPRPNDSNNPIAIFELN >Mature_553_residues MKVSVKAIRGLIIAVSVCGLLLRLIFALLPLQTHLLVLEDDAWMVTAIARNWAMGQGITADGITPTNGFHPVYPLTLGAI PYVFAPDNLALGFTVNLIICALLASLVMWPLWHLLRHLMNWQASLFGIILYALNPVLVRFTVNGMETSMALLLWVTTLLA AVKIDPKKLSHNLGLAALTAAMILTRLDGALLFASIAAARLIWAWRAKRLGRELPMLTSYVVVTFTLLVPYFWRNLTVFG SFSPSSGKALTYLHSYVNSYAISNGLDGWYVNSAISMEVLGRSVVGAALCLAIFAAFVGFWVGRQLWLGLPLLLYLPIPL VYYGYMMQQDNPRHFVPWSLAVIILLAWALAAMLQRLPSISYLAVPALIAGVLIVQTLDSSRFWQEKATAPSQSQPTMYQ AALWMRDNLPSDALIGAKNSGIYQYYSGHHVLNIDGKLNNDILEVYDQRRMLDYLREKGVTHLIDQEGTMADHIQFYSYQ FGERPEHRVPTTFTQFKIYGQLLLSSLGLADKPALDRRDGFEPNQPFSSITTVIQRFPRPNDSNNPIAIFELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61717; Mature: 61717
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSVKAIRGLIIAVSVCGLLLRLIFALLPLQTHLLVLEDDAWMVTAIARNWAMGQGITA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCEEEHHHHHHHHCCCCCCC DGITPTNGFHPVYPLTLGAIPYVFAPDNLALGFTVNLIICALLASLVMWPLWHLLRHLMN CCCCCCCCCCCCCHHHHCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQASLFGIILYALNPVLVRFTVNGMETSMALLLWVTTLLAAVKIDPKKLSHNLGLAALTA HHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH AMILTRLDGALLFASIAAARLIWAWRAKRLGRELPMLTSYVVVTFTLLVPYFWRNLTVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE SFSPSSGKALTYLHSYVNSYAISNGLDGWYVNSAISMEVLGRSVVGAALCLAIFAAFVGF CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH WVGRQLWLGLPLLLYLPIPLVYYGYMMQQDNPRHFVPWSLAVIILLAWALAAMLQRLPSI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC SYLAVPALIAGVLIVQTLDSSRFWQEKATAPSQSQPTMYQAALWMRDNLPSDALIGAKNS HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCC GIYQYYSGHHVLNIDGKLNNDILEVYDQRRMLDYLREKGVTHLIDQEGTMADHIQFYSYQ CEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHH FGERPEHRVPTTFTQFKIYGQLLLSSLGLADKPALDRRDGFEPNQPFSSITTVIQRFPRP CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC NDSNNPIAIFELN CCCCCCEEEEEEC >Mature Secondary Structure MKVSVKAIRGLIIAVSVCGLLLRLIFALLPLQTHLLVLEDDAWMVTAIARNWAMGQGITA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCEEEHHHHHHHHCCCCCCC DGITPTNGFHPVYPLTLGAIPYVFAPDNLALGFTVNLIICALLASLVMWPLWHLLRHLMN CCCCCCCCCCCCCHHHHCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQASLFGIILYALNPVLVRFTVNGMETSMALLLWVTTLLAAVKIDPKKLSHNLGLAALTA HHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH AMILTRLDGALLFASIAAARLIWAWRAKRLGRELPMLTSYVVVTFTLLVPYFWRNLTVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE SFSPSSGKALTYLHSYVNSYAISNGLDGWYVNSAISMEVLGRSVVGAALCLAIFAAFVGF CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH WVGRQLWLGLPLLLYLPIPLVYYGYMMQQDNPRHFVPWSLAVIILLAWALAAMLQRLPSI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC SYLAVPALIAGVLIVQTLDSSRFWQEKATAPSQSQPTMYQAALWMRDNLPSDALIGAKNS HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCC GIYQYYSGHHVLNIDGKLNNDILEVYDQRRMLDYLREKGVTHLIDQEGTMADHIQFYSYQ CEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHH FGERPEHRVPTTFTQFKIYGQLLLSSLGLADKPALDRRDGFEPNQPFSSITTVIQRFPRP CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC NDSNNPIAIFELN CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA