Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900789

Identifier: 159900789

GI number: 159900789

Start: 5458769

End: 5460976

Strand: Direct

Name: 159900789

Synonym: Haur_4276

Alternate gene names: NA

Gene position: 5458769-5460976 (Clockwise)

Preceding gene: 159900788

Following gene: 159900790

Centisome position: 86.01

GC content: 50.27

Gene sequence:

>2208_bases
ATGCAGCGATTTAAACGATTTCTACCATTGGCGCTAATTGCCTTGAGCGCCATTATTTTTCTCATTCCGCCTGCGCGGCC
TAGCATCGATGTTGTGATGGGCAGCGAAGGCGAATTTCTGGTTGAAGGCCAAACTCAAAACTTCCGAAATTTTTATGGAT
TTAAGGAAGTTGAGCGGACAGAGCAAGGTGTATTTCGCTGGACAAGCGGACGTGGCAGCATTGCGTTTCCTTATTGGGAG
AATGTTGCCGCCCCCTTACAGCTTAATCTATTGCTCTGTGGCTGTCGCACCGATGGTCAAACCATGCCCTTAACAGTTAC
GGTCAATCAGCAAGCGTTGCTCAAACTTAATCTGAGCAATCAATGGCAATGGTATCATGTGCAACTTCCCGCTGGTTTAA
CCCACCCTGATCATGATATTTTGCTTGACTTGACCTCGGCAGAATGGCGTAGCCCTGATCAACGTACCTTGGGCATTGTG
GTGCAACGCATCCAAATTGAGGCGTTGGCAGCCCAACCAACCCAATCGTTCGTCGCCTGGCTAGGCTTGGCACTTGGCTT
AGGGTTAATGGTGTTGTGGCAGATTCCAGTGGGCTTTGCAGGAATTGTGTTTGGGCAGTGGCTGCTTGGGGTTTATGGCT
ACCAGCCCCAGTTTTTGCCAAAGGATTTTCTTCTGATCAGTTTGGTTTTTGCCAACGTGATTGGTTGGCAATGCATGCGC
AATCTGCCGCAGCTATGGCGCTGGGTAAGCTTGCCACTCAGTAGCTTTTGGCTGATTAGCAGCCCTCAAATCCTTGGCTC
GTGGATTTTAGATGATGCGTTTATCTCATTTCGCTATGCTGCCAATTTGGCCAATGGTCAGGGGTTGGTGTTCAACCTTG
ACGAGCGGGTCGAAGGCTTTACCAATTTCCTTTGGACCTTATTAAGTAGCTTCAGCATTAAACTTGGGGCCGACCCAATT
TTAGTCACCCATGCAACCAACCTGCTTTTGGGCATGGTGATTGTGGTCTTAAGTTTACAATTGGCCCATCGCTTGCATCA
AAGTAGCTGGATGACCCTAGCGATACCCTTGATGTTGCTCAATTTGCCGTTATTGCTCTACACAAGTTTGGGTAGCGGCA
TGGAAACCGCACTCTTTTGCGCGGGTATTTTGGCAACCGTGCTACTTGCGATCAATCAGGTCTGGGGTTATGCAGCGATC
GCCACCACGCTCACGATTATGACTCGGCCTGATGGCATGCTGTTGGCTGGGATTATTGGCTTACTGGCAATTTGGCAAAG
TTGGCAAACCAAGCACTGGCAGCCGCTAATACGCTACGCCGGAATCTTGAGCCTGACCTTTGTACCCTACTGGCTGGCGC
GTTGGTGGTATTATGGCTATCCACTGCCCAACACGTTTTATGCCAAAGTTGGTGGCACAGCCAAACAAGCCGAACGAGGG
ATTAATTATTTTATTGATTTTAACCGTAGCTACTACTTAGGTTGGCTTGGTTTAGGGCTGGGAGCACTAGCAAGTGGGCT
GCGTTGGTATCAAACTAAAAAAGTACCCATCCTTGCCATCATCACATGGGCAATCGTTGGCCTCTACACCAGCTACACGA
TTAGCGTGGGCGGCGATTGGATGCCAGGTTATCGTTTTATGGTCGCAACTGTGCCATGGTTTGCGCTTTTGGCAAGCTGG
GGCATCAGCGAACTTTGGCACTATCGGCGTTGGCTGGGCGCTAGTGCAATCGTAGCCAGCAGCGCAATCCTGTTGCTCCT
GCTCCAGCCACTTCAGCAAGAACGCCCATTAACAGTTGGTTCGGCGGCTTGGTACGAGACCGATGTGGTCAATCGCTATC
GTGAAGTTGGGCTATGGATCAAAGCCAGCACACCGCCCGAAACCACGCTAACGGTTACCGCTGCCGGAGCCATACCCTAT
TATGCAGAACGCACAACGATTGATGCTCATGGCTTGACCGATCTGCATATTGCGCATCTGCCAATTGATCCGAGCAAGGC
GGGCAAACCTGGCCACGAAAAGCAAGACCCCGATTATGTGCTCCGTGATCGAAAACCAAGCTTAATTCCATGGGTTGCTG
CACCAATGTTTACTAGCCATCCATTATTTGATGCTAACTATCGGCTGATCGAAGCCAGCGGCGTTGAAGGCCGAGGCATT
CGGATGTTTGTCCGCCGTGATAGTGGCCTATTTGAGCAAGCACAATGA

Upstream 100 bases:

>100_bases
TCACATTGAAATTGCTCGGCGGGCTTGATCCGGCTGAGCGAGAGCGTTTATTGAGCATGAAACTTCCATTCAAGGGCGTG
CTTCGGCGCGTATTATAGCT

Downstream 100 bases:

>100_bases
AAGTTTCAGTTAAAGCCATTCGAGGGTTGATTATTGCGGTCAGCGTATGTGGCCTACTTTTGCGGCTGATTTTTGCGCTC
TTGCCCTTGCAAACCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERTEQGVFRWTSGRGSIAFPYWE
NVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSNQWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIV
VQRIQIEALAAQPTQSFVAWLGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR
NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGFTNFLWTLLSSFSIKLGADPI
LVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLLNLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAI
ATTLTIMTRPDGMLLAGIIGLLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG
INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDWMPGYRFMVATVPWFALLASW
GISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVGSAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPY
YAERTTIDAHGLTDLHIAHLPIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI
RMFVRRDSGLFEQAQ

Sequences:

>Translated_735_residues
MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERTEQGVFRWTSGRGSIAFPYWE
NVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSNQWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIV
VQRIQIEALAAQPTQSFVAWLGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR
NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGFTNFLWTLLSSFSIKLGADPI
LVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLLNLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAI
ATTLTIMTRPDGMLLAGIIGLLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG
INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDWMPGYRFMVATVPWFALLASW
GISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVGSAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPY
YAERTTIDAHGLTDLHIAHLPIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI
RMFVRRDSGLFEQAQ
>Mature_735_residues
MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERTEQGVFRWTSGRGSIAFPYWE
NVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSNQWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIV
VQRIQIEALAAQPTQSFVAWLGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR
NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGFTNFLWTLLSSFSIKLGADPI
LVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLLNLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAI
ATTLTIMTRPDGMLLAGIIGLLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG
INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDWMPGYRFMVATVPWFALLASW
GISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVGSAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPY
YAERTTIDAHGLTDLHIAHLPIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI
RMFVRRDSGLFEQAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82481; Mature: 82481

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERT
CCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEECCCCCHHHHCCHHHHHHH
EQGVFRWTSGRGSIAFPYWENVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSN
HCCCEEEECCCCCEECCCHHCCCCCEEEEEEEEECCCCCCEEEEEEEECCEEEEEEECCC
QWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIVVQRIQIEALAAQPTQSFVAW
CEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGF
HHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEECHHHHHHH
TNFLWTLLSSFSIKLGADPILVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLL
HHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAIATTLTIMTRPDGMLLAGIIG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHH
LLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCC
INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDW
CEEEEECCCCEEEHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCC
MPGYRFMVATVPWFALLASWGISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVG
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEC
SAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPYYAERTTIDAHGLTDLHIAHL
CCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEECCCEECCCCCCEEEEEEC
PIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCE
RMFVRRDSGLFEQAQ
EEEEECCCCCCCCCC
>Mature Secondary Structure
MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERT
CCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEECCCCCHHHHCCHHHHHHH
EQGVFRWTSGRGSIAFPYWENVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSN
HCCCEEEECCCCCEECCCHHCCCCCEEEEEEEEECCCCCCEEEEEEEECCEEEEEEECCC
QWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIVVQRIQIEALAAQPTQSFVAW
CEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGF
HHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEECHHHHHHH
TNFLWTLLSSFSIKLGADPILVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLL
HHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAIATTLTIMTRPDGMLLAGIIG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHH
LLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCC
INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDW
CEEEEECCCCEEEHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCC
MPGYRFMVATVPWFALLASWGISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVG
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEC
SAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPYYAERTTIDAHGLTDLHIAHL
CCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEECCCEECCCCCCEEEEEEC
PIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCE
RMFVRRDSGLFEQAQ
EEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA