Click here to switch to the map view.

The map label for this gene is 159900781

Identifier: 159900781

GI number: 159900781

Start: 5442936

End: 5443334

Strand: Direct

Name: 159900781

Synonym: Haur_4268

Alternate gene names: NA

Gene position: 5442936-5443334 (Clockwise)

Preceding gene: 159900780

Following gene: 159900782

Centisome position: 85.76

GC content: 44.86

Gene sequence:

>399_bases
ATGAAACGACGAGATCAATTAGCGATTGGTTTGATTTGTGCAGCTTTAGTTGGATGCGGCACACCAGTTGCTAGCCGCCC
AACTCCCAAACCGATTGTTAATCTAACAGCGGCACCAACTATCGATTTAGATGCAACCCGTGAAGCCTATAAAAATGAGT
TACAACCGACCGCCCAGCCGCTCGGTTTATATATTGTGCGCGATGGCGACACGCTCGAATCGATAGCCTTAGCCTTTAAT
ACCAGCGTAGAAGAAATTTCAGCTACCAATAAACTTGAAGATATCAACGTTATTGCCATTGGACAACCGCTGATCATCCC
ATCGCTGATTAGTGGCACAAGTAATCTGACGATAACGTTGCCATTAAATCAGTCTAAAGACCTAACTCCAACACCTTGA

Upstream 100 bases:

>100_bases
GTATGCCTATCTTTTATTAGCTGGACGCAATGTCCAACAACCAGAATCTGCTGAAGCAAGCGCCTTGAAGCTTGAAACCC
CAGCACACTAGAGGATCATA

Downstream 100 bases:

>100_bases
CAATGATTTTCAGCATGCTATACTTCCAGCATAACCTTTATTCGATAACTACCGCAAGGGATAAAGGAGGTGATGCCAAT
GAATGATAGTAGTCATTGTA

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKRRDQLAIGLICAALVGCGTPVASRPTPKPIVNLTAAPTIDLDATREAYKNELQPTAQPLGLYIVRDGDTLESIALAFN
TSVEEISATNKLEDINVIAIGQPLIIPSLISGTSNLTITLPLNQSKDLTPTP

Sequences:

>Translated_132_residues
MKRRDQLAIGLICAALVGCGTPVASRPTPKPIVNLTAAPTIDLDATREAYKNELQPTAQPLGLYIVRDGDTLESIALAFN
TSVEEISATNKLEDINVIAIGQPLIIPSLISGTSNLTITLPLNQSKDLTPTP
>Mature_132_residues
MKRRDQLAIGLICAALVGCGTPVASRPTPKPIVNLTAAPTIDLDATREAYKNELQPTAQPLGLYIVRDGDTLESIALAFN
TSVEEISATNKLEDINVIAIGQPLIIPSLISGTSNLTITLPLNQSKDLTPTP

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13974; Mature: 13974

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRDQLAIGLICAALVGCGTPVASRPTPKPIVNLTAAPTIDLDATREAYKNELQPTAQP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCCHHHHHHHCCCCCCCC
LGLYIVRDGDTLESIALAFNTSVEEISATNKLEDINVIAIGQPLIIPSLISGTSNLTITL
EEEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCEEEEE
PLNQSKDLTPTP
ECCCCCCCCCCC
>Mature Secondary Structure
MKRRDQLAIGLICAALVGCGTPVASRPTPKPIVNLTAAPTIDLDATREAYKNELQPTAQP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCCHHHHHHHCCCCCCCC
LGLYIVRDGDTLESIALAFNTSVEEISATNKLEDINVIAIGQPLIIPSLISGTSNLTITL
EEEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCEEEEE
PLNQSKDLTPTP
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA