| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900782
Identifier: 159900782
GI number: 159900782
Start: 5449262
End: 5451298
Strand: Direct
Name: 159900782
Synonym: Haur_4269
Alternate gene names: NA
Gene position: 5449262-5451298 (Clockwise)
Preceding gene: 159900781
Following gene: 159900783
Centisome position: 85.86
GC content: 48.4
Gene sequence:
>2037_bases ATGCAATTGGTTGGTTCAACGCTTTTTCGAGATCGATCATCGATTTTTGCTGAGCCATGGCGGGTTTGGCTCGCTGCGGT TGGGGGCTTGGTGCTTTGGGCGGTATTGCTCTTAACCATTACTTATCAGTGGCAAGCTCAAGCCACAATTACGCTTGGCG ATTATTATGATCCGCCTTTTCTCCAAGGCAATTTCTCGCCTGGCGAGGTCAGTCAGGGTAATAATCGTTCGTTTCGCTGG ACAACTGGCGAGGCCACACTTGCCGTTCCTTTAGCTGGTCGCGGCAGTTGGACAACCAAAATCGATTTGTTAACTCAACA TCCTGATGCTAGTCCAGTTGAGGCAACCCTAAATTTTGCCCCGAATGTGGCTGTGGCACTGCCAGATAGCAATGAGACGC GAATTATTCATGCCTTTATTCCAGCTACTGCAACTAGCAATGGCAATCTGGCAATTGGGCTGAATTCAAATCTATATCAG GAGCAAACGGCTAGTGCCCGAACCTTGGGCGTAGCCTTATTTAATGTTGAGCTTGCTTCAACGACAGGCCGCCCTTGGTT GCCACCATTGCTTGCAGTAGTTTTGCTCAGCATTATTTTGCTTGGCATCGCCGCGAGCATTCTGCTGACTGGCATCAATT GGACTTGGGCGGTTGGCCTTAGCGCGGCTCTTGGCGTTGGTTTGGCGCTGCCAGTAATGTTGGCGCGTGTGCCACATACC TTTTGGTTGCCAAATTTGGCGGTGCTGGCGGTTTTGAGCGTTGGCTTAGTTGCTGCGCTACGCAAAATTGTGCCGTGGCT GATGCACAAGGGTGGCATTGAATTAGAGCCACGAACCTTGACGATTTTGCTTGGCTTGTTTTTATTTGGCTTTTGGGTCA AAGCTGCGGGCCAAGTCTATCCATATATGATCGCGATCGATATTCATTGGCATATGGAGCGAGTACGCTGGATTTTGGAT GGTCGTTTGGCTGAAATGTATAAGCCAGGTGCGTTCAATGAGTCAGTGATGCCCGAAAAGGAATTCGGCAAGGATCGGCC AATTATTCCATATTCGCCGTTTTTCCATATTTTCGCCACTTCGTTTGCCTTGCTGCCCTTCCAAATGGAGACAACGGCCA AGATATTTAGTTCAATCATTGATTCGAGCTATATCTTTTTGATTTATTTCTTTGCCCGTTCGTTTGATTTCTCGCGACGG GTCGGGTTGTTGGCGGCAGCCTTTTATAACGTAGTGCCATTAACCTATTTGTTGCATTCATGGGGCAATGTGCCAACCAC CTTTGGTATGTGGTGGACATTTATGAGCATTGCTTTTGTGATTGGGGCTTGGGGCAAGCTTGATCAACGCAAGGTTTGGT GGAGTTTCGCCGCCTTGTTGACTGTGGCATTTTTGATGTACACGGTGATGGCGGTATTCTTGGGCTTGTTGCTGTGCATT TGGATGAGCTATATCGCCATCACTAAGCGTAGCGAACGTCGCCAAGCCCGTTCAGTAATCACAGCAATGTTGGTGGGGGT GCTTGGTTCAACGATCGTCTATTATGGCTTGTATATTCCAGGCATCATTGAAAAAACGATTCCTTACTTCACCACAACCT TTACCGAAGGCCAAGAAGCTGTCGGCGCAATTCAATATCAGCCCACAGCCTACGATAATTTCCTCGCGTATCGCACCCGC TTATGGAACCATGGCTTGATGATTCCCTTCCTGCTATTGCCATTTGCTTTGTGGGTGATCGCTCGCTTGCGCACGCGCCA GCCCGAAACTCGCTTGTGGATGGGATCGATTTGGATGTGTGCGATGGTAACTGTTTCGTTACTATTCACCGTGATTGATC GCAATGTGCCAATGGTTGATAAGCATATTATTTTCTTGATTCCAGTGTGGGCGATTTTGATGGCAATGTTGATGGATATG GCGCTCAAACGTTGGCGCTGGAGCAGCATTCTGTTTGGCTTGGCCTACCTTGGGCTATTTGCAATGTCGATTGAATTATG GACACGGCGGATCGCAACGGTGAAACAAATATGGTAG
Upstream 100 bases:
>100_bases TGGCCTTGCTTGTCAAATTGGTTGCAAAGGTAGGGTGATCGCCTATAATTGTTCAGCAAAATATGAGATTAAACACCTTT TAGTGATTGAGTGATTTCGC
Downstream 100 bases:
>100_bases TTGATTCAAATGAAACGGCATTGATCGAGCAGATCGATCGCTGGGTTGAGCCAATGAACTGGCGACCAGATTACACCACT TGGCGCGAAAAACGGATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MQLVGSTLFRDRSSIFAEPWRVWLAAVGGLVLWAVLLLTITYQWQAQATITLGDYYDPPFLQGNFSPGEVSQGNNRSFRW TTGEATLAVPLAGRGSWTTKIDLLTQHPDASPVEATLNFAPNVAVALPDSNETRIIHAFIPATATSNGNLAIGLNSNLYQ EQTASARTLGVALFNVELASTTGRPWLPPLLAVVLLSIILLGIAASILLTGINWTWAVGLSAALGVGLALPVMLARVPHT FWLPNLAVLAVLSVGLVAALRKIVPWLMHKGGIELEPRTLTILLGLFLFGFWVKAAGQVYPYMIAIDIHWHMERVRWILD GRLAEMYKPGAFNESVMPEKEFGKDRPIIPYSPFFHIFATSFALLPFQMETTAKIFSSIIDSSYIFLIYFFARSFDFSRR VGLLAAAFYNVVPLTYLLHSWGNVPTTFGMWWTFMSIAFVIGAWGKLDQRKVWWSFAALLTVAFLMYTVMAVFLGLLLCI WMSYIAITKRSERRQARSVITAMLVGVLGSTIVYYGLYIPGIIEKTIPYFTTTFTEGQEAVGAIQYQPTAYDNFLAYRTR LWNHGLMIPFLLLPFALWVIARLRTRQPETRLWMGSIWMCAMVTVSLLFTVIDRNVPMVDKHIIFLIPVWAILMAMLMDM ALKRWRWSSILFGLAYLGLFAMSIELWTRRIATVKQIW
Sequences:
>Translated_678_residues MQLVGSTLFRDRSSIFAEPWRVWLAAVGGLVLWAVLLLTITYQWQAQATITLGDYYDPPFLQGNFSPGEVSQGNNRSFRW TTGEATLAVPLAGRGSWTTKIDLLTQHPDASPVEATLNFAPNVAVALPDSNETRIIHAFIPATATSNGNLAIGLNSNLYQ EQTASARTLGVALFNVELASTTGRPWLPPLLAVVLLSIILLGIAASILLTGINWTWAVGLSAALGVGLALPVMLARVPHT FWLPNLAVLAVLSVGLVAALRKIVPWLMHKGGIELEPRTLTILLGLFLFGFWVKAAGQVYPYMIAIDIHWHMERVRWILD GRLAEMYKPGAFNESVMPEKEFGKDRPIIPYSPFFHIFATSFALLPFQMETTAKIFSSIIDSSYIFLIYFFARSFDFSRR VGLLAAAFYNVVPLTYLLHSWGNVPTTFGMWWTFMSIAFVIGAWGKLDQRKVWWSFAALLTVAFLMYTVMAVFLGLLLCI WMSYIAITKRSERRQARSVITAMLVGVLGSTIVYYGLYIPGIIEKTIPYFTTTFTEGQEAVGAIQYQPTAYDNFLAYRTR LWNHGLMIPFLLLPFALWVIARLRTRQPETRLWMGSIWMCAMVTVSLLFTVIDRNVPMVDKHIIFLIPVWAILMAMLMDM ALKRWRWSSILFGLAYLGLFAMSIELWTRRIATVKQIW >Mature_678_residues MQLVGSTLFRDRSSIFAEPWRVWLAAVGGLVLWAVLLLTITYQWQAQATITLGDYYDPPFLQGNFSPGEVSQGNNRSFRW TTGEATLAVPLAGRGSWTTKIDLLTQHPDASPVEATLNFAPNVAVALPDSNETRIIHAFIPATATSNGNLAIGLNSNLYQ EQTASARTLGVALFNVELASTTGRPWLPPLLAVVLLSIILLGIAASILLTGINWTWAVGLSAALGVGLALPVMLARVPHT FWLPNLAVLAVLSVGLVAALRKIVPWLMHKGGIELEPRTLTILLGLFLFGFWVKAAGQVYPYMIAIDIHWHMERVRWILD GRLAEMYKPGAFNESVMPEKEFGKDRPIIPYSPFFHIFATSFALLPFQMETTAKIFSSIIDSSYIFLIYFFARSFDFSRR VGLLAAAFYNVVPLTYLLHSWGNVPTTFGMWWTFMSIAFVIGAWGKLDQRKVWWSFAALLTVAFLMYTVMAVFLGLLLCI WMSYIAITKRSERRQARSVITAMLVGVLGSTIVYYGLYIPGIIEKTIPYFTTTFTEGQEAVGAIQYQPTAYDNFLAYRTR LWNHGLMIPFLLLPFALWVIARLRTRQPETRLWMGSIWMCAMVTVSLLFTVIDRNVPMVDKHIIFLIPVWAILMAMLMDM ALKRWRWSSILFGLAYLGLFAMSIELWTRRIATVKQIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76304; Mature: 76304
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLVGSTLFRDRSSIFAEPWRVWLAAVGGLVLWAVLLLTITYQWQAQATITLGDYYDPPF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCC LQGNFSPGEVSQGNNRSFRWTTGEATLAVPLAGRGSWTTKIDLLTQHPDASPVEATLNFA CCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHEECC PNVAVALPDSNETRIIHAFIPATATSNGNLAIGLNSNLYQEQTASARTLGVALFNVELAS CCEEEECCCCCCCEEEEEEECCEECCCCCEEEECCCCHHHHHHCCHHHHEEEEEEEEEEC TTGRPWLPPLLAVVLLSIILLGIAASILLTGINWTWAVGLSAALGVGLALPVMLARVPHT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH FWLPNLAVLAVLSVGLVAALRKIVPWLMHKGGIELEPRTLTILLGLFLFGFWVKAAGQVY HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHCCCEE PYMIAIDIHWHMERVRWILDGRLAEMYKPGAFNESVMPEKEFGKDRPIIPYSPFFHIFAT EEEEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHH SFALLPFQMETTAKIFSSIIDSSYIFLIYFFARSFDFSRRVGLLAAAFYNVVPLTYLLHS HHHHCCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC WGNVPTTFGMWWTFMSIAFVIGAWGKLDQRKVWWSFAALLTVAFLMYTVMAVFLGLLLCI CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMSYIAITKRSERRQARSVITAMLVGVLGSTIVYYGLYIPGIIEKTIPYFTTTFTEGQEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH VGAIQYQPTAYDNFLAYRTRLWNHGLMIPFLLLPFALWVIARLRTRQPETRLWMGSIWMC HCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AMVTVSLLFTVIDRNVPMVDKHIIFLIPVWAILMAMLMDMALKRWRWSSILFGLAYLGLF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSIELWTRRIATVKQIW HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLVGSTLFRDRSSIFAEPWRVWLAAVGGLVLWAVLLLTITYQWQAQATITLGDYYDPPF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCC LQGNFSPGEVSQGNNRSFRWTTGEATLAVPLAGRGSWTTKIDLLTQHPDASPVEATLNFA CCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHEECC PNVAVALPDSNETRIIHAFIPATATSNGNLAIGLNSNLYQEQTASARTLGVALFNVELAS CCEEEECCCCCCCEEEEEEECCEECCCCCEEEECCCCHHHHHHCCHHHHEEEEEEEEEEC TTGRPWLPPLLAVVLLSIILLGIAASILLTGINWTWAVGLSAALGVGLALPVMLARVPHT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH FWLPNLAVLAVLSVGLVAALRKIVPWLMHKGGIELEPRTLTILLGLFLFGFWVKAAGQVY HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHCCCEE PYMIAIDIHWHMERVRWILDGRLAEMYKPGAFNESVMPEKEFGKDRPIIPYSPFFHIFAT EEEEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHH SFALLPFQMETTAKIFSSIIDSSYIFLIYFFARSFDFSRRVGLLAAAFYNVVPLTYLLHS HHHHCCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC WGNVPTTFGMWWTFMSIAFVIGAWGKLDQRKVWWSFAALLTVAFLMYTVMAVFLGLLLCI CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMSYIAITKRSERRQARSVITAMLVGVLGSTIVYYGLYIPGIIEKTIPYFTTTFTEGQEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH VGAIQYQPTAYDNFLAYRTRLWNHGLMIPFLLLPFALWVIARLRTRQPETRLWMGSIWMC HCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AMVTVSLLFTVIDRNVPMVDKHIIFLIPVWAILMAMLMDMALKRWRWSSILFGLAYLGLF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSIELWTRRIATVKQIW HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA