| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900774
Identifier: 159900774
GI number: 159900774
Start: 5436797
End: 5437825
Strand: Reverse
Name: 159900774
Synonym: Haur_4261
Alternate gene names: NA
Gene position: 5437825-5436797 (Counterclockwise)
Preceding gene: 159900776
Following gene: 159900773
Centisome position: 85.68
GC content: 51.6
Gene sequence:
>1029_bases GTGAACACAAAACGACAAGCACGCGGGATTAAGCGTTCATCGGTGATGAAGGTGCAGCGTCAGATGTTGTTGCTGCGTTG TTTGGGCAGCGGCCCTAAAACGAGTGATGCCTTAATTGACGAAGTTAATAGCCAAATGCTCGAAGCGTATCCTAAAGCGG CCCGCGAGGCGCTCCGTCACGATCTACGGGCTTTGCGCGAGGTTTTTGGCTGTGTGATCGAATACACGGCTTCGGTGGGT TATCGTTTGGTCAGCGTTGGCGATTTGGCCTTGCTCAATTTAACCAATGATGAAATTGCGGCGCTGCGCTTTCTTGATGC AACCTACACTGCCAATAGCACCTTGCCTGATCATCAACAGGTGCGGCGCTTGGTCGAGCGGATAATCGATTTCTTGCCAA TCGAGCGGCGTGGGGCTTTGAATGTGGGCGAGCCAATTTTGCAGCAAGCTGGCCCTGTTGCGCCCTATGAACATGATCCG CAGATTATGCGTAGTTTGCGCAAAGCCCTCGCCCAGCGCCGCGAAATTCGTTTTCGCTATACTTCAAGCCAACGTGATGG CGAGGAGACGCATCGGGTTGGGCCAGTTAATATTTTTACTCGCGATGGCCATATGTATCTTTTGGGCTATTGTTTTGATG GCCCGCAACAGATGGTCGAGCGGGTTGGCCGTTATGTTGATTATCGCATCGACTATATTAGCAAAAACAGCTTAACAATC TTGCCACGGGTCTTGCCACCAGCCCTGCCCAAACGCCCAACCTGGACAGTTAAGTATGAATTGCGCGATGTCGTTGCCCG CAATAAAAAAGTTGCCCACTGGTTTGCTGATACTGATATTCAATATCGTGATGATGGCTCGGCCTTGGTGACGGCCACGG TGCATAATCTCTGGCAAACGCGCCAAATTCTGTTGCGCTACTTGGAGAATTGTCGTGTGCTAGAGCCACCCGAATTGATC GATATGATGCGGGCGACGGCCCAGGGCTTGCGCGATTTGTACCCACCTAGCACCAACGAAATTGGTTAA
Upstream 100 bases:
>100_bases TTGTCGTTGATCTTGCACAATTTGTTTGCAGTCCCATATGTGCCCCACGTTCCACACCACAACAATCTGAATGGGCTTAT TTTGGAATAGTGAGGATTAC
Downstream 100 bases:
>100_bases GCTAATATTCTAGTGTTGGGATACTAGTTGATGATTTTTGCAGATCTGAGTGGGCTATAGTACAATAGGGTGCACCCTTC GCTGTACGTGCGGTGGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNTKRQARGIKRSSVMKVQRQMLLLRCLGSGPKTSDALIDEVNSQMLEAYPKAAREALRHDLRALREVFGCVIEYTASVG YRLVSVGDLALLNLTNDEIAALRFLDATYTANSTLPDHQQVRRLVERIIDFLPIERRGALNVGEPILQQAGPVAPYEHDP QIMRSLRKALAQRREIRFRYTSSQRDGEETHRVGPVNIFTRDGHMYLLGYCFDGPQQMVERVGRYVDYRIDYISKNSLTI LPRVLPPALPKRPTWTVKYELRDVVARNKKVAHWFADTDIQYRDDGSALVTATVHNLWQTRQILLRYLENCRVLEPPELI DMMRATAQGLRDLYPPSTNEIG
Sequences:
>Translated_342_residues MNTKRQARGIKRSSVMKVQRQMLLLRCLGSGPKTSDALIDEVNSQMLEAYPKAAREALRHDLRALREVFGCVIEYTASVG YRLVSVGDLALLNLTNDEIAALRFLDATYTANSTLPDHQQVRRLVERIIDFLPIERRGALNVGEPILQQAGPVAPYEHDP QIMRSLRKALAQRREIRFRYTSSQRDGEETHRVGPVNIFTRDGHMYLLGYCFDGPQQMVERVGRYVDYRIDYISKNSLTI LPRVLPPALPKRPTWTVKYELRDVVARNKKVAHWFADTDIQYRDDGSALVTATVHNLWQTRQILLRYLENCRVLEPPELI DMMRATAQGLRDLYPPSTNEIG >Mature_342_residues MNTKRQARGIKRSSVMKVQRQMLLLRCLGSGPKTSDALIDEVNSQMLEAYPKAAREALRHDLRALREVFGCVIEYTASVG YRLVSVGDLALLNLTNDEIAALRFLDATYTANSTLPDHQQVRRLVERIIDFLPIERRGALNVGEPILQQAGPVAPYEHDP QIMRSLRKALAQRREIRFRYTSSQRDGEETHRVGPVNIFTRDGHMYLLGYCFDGPQQMVERVGRYVDYRIDYISKNSLTI LPRVLPPALPKRPTWTVKYELRDVVARNKKVAHWFADTDIQYRDDGSALVTATVHNLWQTRQILLRYLENCRVLEPPELI DMMRATAQGLRDLYPPSTNEIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39247; Mature: 39247
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRQARGIKRSSVMKVQRQMLLLRCLGSGPKTSDALIDEVNSQMLEAYPKAAREALRH CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLRALREVFGCVIEYTASVGYRLVSVGDLALLNLTNDEIAALRFLDATYTANSTLPDHQQ HHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHH VRRLVERIIDFLPIERRGALNVGEPILQQAGPVAPYEHDPQIMRSLRKALAQRREIRFRY HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE TSSQRDGEETHRVGPVNIFTRDGHMYLLGYCFDGPQQMVERVGRYVDYRIDYISKNSLTI CCCCCCCHHHHCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHEEEECCCCCEE LPRVLPPALPKRPTWTVKYELRDVVARNKKVAHWFADTDIQYRDDGSALVTATVHNLWQT EHHHCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCEECCCCCEEEHHHHHHHHHH RQILLRYLENCRVLEPPELIDMMRATAQGLRDLYPPSTNEIG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNTKRQARGIKRSSVMKVQRQMLLLRCLGSGPKTSDALIDEVNSQMLEAYPKAAREALRH CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLRALREVFGCVIEYTASVGYRLVSVGDLALLNLTNDEIAALRFLDATYTANSTLPDHQQ HHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHH VRRLVERIIDFLPIERRGALNVGEPILQQAGPVAPYEHDPQIMRSLRKALAQRREIRFRY HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE TSSQRDGEETHRVGPVNIFTRDGHMYLLGYCFDGPQQMVERVGRYVDYRIDYISKNSLTI CCCCCCCHHHHCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHEEEECCCCCEE LPRVLPPALPKRPTWTVKYELRDVVARNKKVAHWFADTDIQYRDDGSALVTATVHNLWQT EHHHCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCEECCCCCEEEHHHHHHHHHH RQILLRYLENCRVLEPPELIDMMRATAQGLRDLYPPSTNEIG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA