| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900606
Identifier: 159900606
GI number: 159900606
Start: 5225601
End: 5226098
Strand: Reverse
Name: 159900606
Synonym: Haur_4093
Alternate gene names: NA
Gene position: 5226098-5225601 (Counterclockwise)
Preceding gene: 159900613
Following gene: 159900605
Centisome position: 82.35
GC content: 52.41
Gene sequence:
>498_bases GTGTACTTTACACAAAACGATCCTCAGATTCTTTTCCCTTCGTGGGTAGCAGGTTTGTTGGTTATTTGGATTGCGGTTTT AGTGGGTGCAATTTTTTGGCTGCGCTCGCTGCCACCCAAAAATCCGGCGCGTTTGGCGTTTCGCAAGCGCACCAGCAACG GCCTGTTGATCATCGCCGGGATTGGGATCGTGCAGTTTCTGGCGCGTTGGCTGAAGATCGACGTAGTTGAGTGGCGCTTG TGGGGCTATGTTTTATTTGTCGCATTGATTGGTTTCGGGCTGTATTCATGGCAATATGCTCGTTCAACCTTGCCTGCCTT GGTTTCGCAAACTGGCAAAGTTAAATCCAATTATGCTAAGAGCCGCGCTGCTGCTGCCGGTAGCAATGCCAAGGCTAGTG CTGATGGTGTCGCAAGCGAACCTGCTGCACCCCGCGAACCCAAGCCAATTGCAACCACTGGCCGTCGTGAAGCACGCCGC TCCAAGAAACGCAAGTAA
Upstream 100 bases:
>100_bases GCGTTTTTGGGCTTGTTAATGGCACATTGACGCTTTTTTCAGCGGGCTTTATAATGCTTAGCGCTTAATGCAACTTCACT TCTTCGCAGGAGGCTGCTCG
Downstream 100 bases:
>100_bases TTCGCTCAGTTGGTAACAATTAAACACTGGCTCTGCGTTGCAGGCTGGTGTTTTTGTTTTTTTAGGTTAGTTCCCTCACC CCCTAGCCACCTCTCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAGIGIVQFLARWLKIDVVEWRL WGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAKSRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARR SKKRK
Sequences:
>Translated_165_residues MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAGIGIVQFLARWLKIDVVEWRL WGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAKSRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARR SKKRK >Mature_165_residues MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAGIGIVQFLARWLKIDVVEWRL WGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAKSRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARR SKKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18269; Mature: 18269
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAG CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCEEEEEH IGIVQFLARWLKIDVVEWRLWGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARRSKKRK HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAG CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCEEEEEH IGIVQFLARWLKIDVVEWRLWGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARRSKKRK HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA