| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is corA [H]
Identifier: 159900550
GI number: 159900550
Start: 5153053
End: 5154036
Strand: Reverse
Name: corA [H]
Synonym: Haur_4037
Alternate gene names: 159900550
Gene position: 5154036-5153053 (Counterclockwise)
Preceding gene: 159900551
Following gene: 159900545
Centisome position: 81.21
GC content: 47.97
Gene sequence:
>984_bases ATGGTGTTTATGTTTCAAGCACTGTATAGCTTGCCCGACCAACCATTACGCAAAATCAAGACTGTTGAAGAAATTCACGA CCTCCATGCCAGCGGCGAGGGCATGCTGTGGGTCAATTTATACGCCTGTCAGCAAACCGAATACGACACCTTCTTACGCG AGATATTTCATTTTCACCCGCTAGCAATCGAAGATACGCTGAGCACCGGCTATCAACCACCCAAAGTTGATGATTTTGGC GATCATCTGTTCATTATTGTGCATACACTGGCAGTGGGCGAGGATGTTTCACGCCTAAGTACCGATGAACTTAATTGCTT TTTAGGCCGTAATTTTGTTGTAACGACCTCGCATGTACGCTTAGCAGCTTTGGATACCGTTTGGGATCGGGCGGTACGTG ATGGCCGAATTCTGGAGCGCGGAGCCGATTTCTTGGCCCATGCCGTGCTTGATGCCGTTGTTGATGAATTTCTACCTTAC CTTGATCGGATTGATGAAGAGGTCGATTTTCTCGAAGATAGCATCATTCAAGACCCTAAGCCCAGTGCTTTACGCCGCAT TTTGGAGCTTAAGCATAGTATTTTGGCCTTACGACGGGTTGTATCGCCGCAACGTGAAGTAATGCAGCGGCTCTCACGCG GCGAGTTCGACCTGATTTCGCGCAATTGTGAAATTTACTTTCGCGATATTTACGACCATTTGGTGCGAATTACCGACCTC AGCGAAGGGGTGCGCGATGTGGTTGGCAGCACCTTGGATACCTACCTCTCGGTTTCCTCGAACAAAATGAATGAAATTAT GAAGGCACTAACGATCGTCAGCACGATTTTTCTGCCACTAACCCTCGTTACCTCGCTGTATGGGATGAATTTTGATCTGA TGCCTGAATTGCACTGGCGCTATGGTTATTTGATGGTTTGGGCAATTATGCTCGCGATCACCATTGGAATGCTCTGGTTT TTTCGGCGGCGACGTTGGCTCTAG
Upstream 100 bases:
>100_bases CTGATTGCCGCCGATGATGGAATTACCAGCGTCAAGTAAGCCTAGATTGCATCGATAGTTTGGGGCAAGTCGCAGGACTT GCCCTTTTTGCTCATAAAAG
Downstream 100 bases:
>100_bases ACTCCATGGAATGATTAACGTAATAAGCCTTCGAAGAGACTAGTTCTCTTATAGGGGTCAGGGCAGGTGCCAATCAATCT CCGATAGCCCAAAGCCAATA
Product: magnesium and cobalt transport protein CorA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MVFMFQALYSLPDQPLRKIKTVEEIHDLHASGEGMLWVNLYACQQTEYDTFLREIFHFHPLAIEDTLSTGYQPPKVDDFG DHLFIIVHTLAVGEDVSRLSTDELNCFLGRNFVVTTSHVRLAALDTVWDRAVRDGRILERGADFLAHAVLDAVVDEFLPY LDRIDEEVDFLEDSIIQDPKPSALRRILELKHSILALRRVVSPQREVMQRLSRGEFDLISRNCEIYFRDIYDHLVRITDL SEGVRDVVGSTLDTYLSVSSNKMNEIMKALTIVSTIFLPLTLVTSLYGMNFDLMPELHWRYGYLMVWAIMLAITIGMLWF FRRRRWL
Sequences:
>Translated_327_residues MVFMFQALYSLPDQPLRKIKTVEEIHDLHASGEGMLWVNLYACQQTEYDTFLREIFHFHPLAIEDTLSTGYQPPKVDDFG DHLFIIVHTLAVGEDVSRLSTDELNCFLGRNFVVTTSHVRLAALDTVWDRAVRDGRILERGADFLAHAVLDAVVDEFLPY LDRIDEEVDFLEDSIIQDPKPSALRRILELKHSILALRRVVSPQREVMQRLSRGEFDLISRNCEIYFRDIYDHLVRITDL SEGVRDVVGSTLDTYLSVSSNKMNEIMKALTIVSTIFLPLTLVTSLYGMNFDLMPELHWRYGYLMVWAIMLAITIGMLWF FRRRRWL >Mature_327_residues MVFMFQALYSLPDQPLRKIKTVEEIHDLHASGEGMLWVNLYACQQTEYDTFLREIFHFHPLAIEDTLSTGYQPPKVDDFG DHLFIIVHTLAVGEDVSRLSTDELNCFLGRNFVVTTSHVRLAALDTVWDRAVRDGRILERGADFLAHAVLDAVVDEFLPY LDRIDEEVDFLEDSIIQDPKPSALRRILELKHSILALRRVVSPQREVMQRLSRGEFDLISRNCEIYFRDIYDHLVRITDL SEGVRDVVGSTLDTYLSVSSNKMNEIMKALTIVSTIFLPLTLVTSLYGMNFDLMPELHWRYGYLMVWAIMLAITIGMLWF FRRRRWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=274, Percent_Identity=22.992700729927, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI2367297, Length=66, Percent_Identity=43.9393939393939, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38007; Mature: 38007
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFMFQALYSLPDQPLRKIKTVEEIHDLHASGEGMLWVNLYACQQTEYDTFLREIFHFHP CCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCC LAIEDTLSTGYQPPKVDDFGDHLFIIVHTLAVGEDVSRLSTDELNCFLGRNFVVTTSHVR CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHH LAALDTVWDRAVRDGRILERGADFLAHAVLDAVVDEFLPYLDRIDEEVDFLEDSIIQDPK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSALRRILELKHSILALRRVVSPQREVMQRLSRGEFDLISRNCEIYFRDIYDHLVRITDL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHH SEGVRDVVGSTLDTYLSVSSNKMNEIMKALTIVSTIFLPLTLVTSLYGMNFDLMPELHWR HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH YGYLMVWAIMLAITIGMLWFFRRRRWL HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVFMFQALYSLPDQPLRKIKTVEEIHDLHASGEGMLWVNLYACQQTEYDTFLREIFHFHP CCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCC LAIEDTLSTGYQPPKVDDFGDHLFIIVHTLAVGEDVSRLSTDELNCFLGRNFVVTTSHVR CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHH LAALDTVWDRAVRDGRILERGADFLAHAVLDAVVDEFLPYLDRIDEEVDFLEDSIIQDPK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSALRRILELKHSILALRRVVSPQREVMQRLSRGEFDLISRNCEIYFRDIYDHLVRITDL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHH SEGVRDVVGSTLDTYLSVSSNKMNEIMKALTIVSTIFLPLTLVTSLYGMNFDLMPELHWR HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH YGYLMVWAIMLAITIGMLWFFRRRRWL HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]