| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900551
Identifier: 159900551
GI number: 159900551
Start: 5154098
End: 5155888
Strand: Reverse
Name: 159900551
Synonym: Haur_4038
Alternate gene names: NA
Gene position: 5155888-5154098 (Counterclockwise)
Preceding gene: 159900552
Following gene: 159900550
Centisome position: 81.24
GC content: 55.22
Gene sequence:
>1791_bases TTGAAGTTGTTGTTACGGCAACGTGTGAGTTTAGCCTTGGTTGTTGTGGCGCTCGCAGCATGTCAACAAGCCCCACAGCC CACTGCTCGCCCGTTACAAAATGAGCTAACTATTCTCGCCTTAACTCCGACAGGCACGGCTACTCCTACGGCAACGGTGA CATTAACGCCTGCACCTGCGTCGCCAACAACCGAGCCTTCGGCTACCCCAACCCGCACAGTTGGCCCTTCGCCTACCAAA GGCGCTTCTCCAACCGCTGGCCCTTCACCAGTCGGTACACCTCGGGCCACTCCCGCGAGTACCCCAACTGCCAATCAAAG CAGTAGTTTTTGTACGCAGCCATTTGGGGCGGTAACCGACGAGCGCTTCAGCGCCCGCTTAAATAACGCTGGGCTTGATC GCACGCCCAATGGCGATCGCTTATTCTTAGAATTAACCTCCAGCAGCGGCCCCGTCAACGGTGTCGTGCGCTGTGTGCCT CCAGCAGCGGCCCAATTGCTCGCAGGCGATAGCGCAATTGCCAGCGTGATTCAAATCGATCTGCCGCTATGGCGACACGA TGATCTCTGGCGTTCATCGTCGGTCACGCTCACCAAAGTGCTCAAACTTGATACGCTGCAACATGTACGCTCAGTCGTTT CGCAATCTAGCAGCGATTCAGCTGGGGTATTAATTGAAATTGGGCTGGATCAGGCTTTGCCATTTACGGTGCAGCTCGAT GGCGGACGCTTAAATGTGGTGATTGCTGATAGCGCTACCGCCACGCTGGGCGATGATCCACTAGCCAAGAGCAATGGTTC ACCCAGCGCACCCAAGCAACCAGTTGTGTTTGCCAGCAAAGGCGATTTGTATCGCTACGAAAGCTCGCGAGTCGTGCCAA TTACCACAACCTTGGCAATTGAAAGTGCAGTGGCAATCAGCCCTGATCGTACCCAAATTGCCTTCTGTCGCGCCAACCCC GATGGCTTGCCAACCCAAGGCGCACTCTGGACCAGCACAATTGATGGCGATAATGAAACCTTGGTCGCTGATGTTGGTGG TTGTGCCGAGCCTGCTTGGTCGCTTGATGGCGGGATCATTTGGTTTACTGCCCCTTGGAGCGATGCGGCCCCTGATAGCT ATCGACTCTGGCAGGTGAAAGCCAATGGCGGCGATGCGAGCGCGGTCTCGCCGCTCGACGAGTGGAGCCGCCGTATGCCG CATGCCTTGCCCGATGGCTCAGTACTGACGGTTGGCCATACCGATGGCGGTCAAGGTGGCTTGTTGATCAGTAATCCGTT GAGTGGCACTGATGGATTGCTTGGCCAAGCGAGCTTGGGCAATTATCGCAGCGTTGGTCAAGCCCAAGTTTCGGCTGATG GCACCCGGATTGCCGTCGAAGCGCTCCGAGCTGATGGTGGCGCGGATCTCTTGGTGCTCGACCAAACTGGGAAGCAACTC GATGCAATTACCGACCAATGGTGGGTACGCCCGCTCTCGTGGAGCAGCGATAACAAACTCTACTATTTAAATGTGGCTTG TCGTAGCGGCCAAGTATTGAATTATAGCCTGCACAGTCGCCAAGGCAGCAACGATAGTCAAATTATCAAAGGTGCAACCC TTGGCGATTTAGGTTCAGTCGCTGTGGTTGATGATGCGCTGTTGTATGTTCGGGCTTTACAATCGCCCGACAACGAACGT GGTGCAGAGCCTATGATTAGCGGCCCTAGCGAGTTGTGGTTGTATGATCTTTCGAATACAGCTCGTACCCGCCTGATTGC CGCCGATGATGGAATTACCAGCGTCAAGTAA
Upstream 100 bases:
>100_bases ATTACAGCGCGGCTGGATTAAAATTGTGCAAAACGATAATTCGTTTTCTGGCATGTAATTGCGGCGTTAGCGCCGATTTG GATTGTCCAAGGAGTGTCGT
Downstream 100 bases:
>100_bases GCCTAGATTGCATCGATAGTTTGGGGCAAGTCGCAGGACTTGCCCTTTTTGCTCATAAAAGATGGTGTTTATGTTTCAAG CACTGTATAGCTTGCCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPASPTTEPSATPTRTVGPSPTK GASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTDERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVP PAAAQLLAGDSAIASVIQIDLPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAIESAVAISPDRTQIAFCRANP DGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMP HALPDGSVLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSVAVVDDALLYVRALQSPDNER GAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK
Sequences:
>Translated_596_residues MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPASPTTEPSATPTRTVGPSPTK GASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTDERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVP PAAAQLLAGDSAIASVIQIDLPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAIESAVAISPDRTQIAFCRANP DGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMP HALPDGSVLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSVAVVDDALLYVRALQSPDNER GAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK >Mature_596_residues MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPASPTTEPSATPTRTVGPSPTK GASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTDERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVP PAAAQLLAGDSAIASVIQIDLPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAIESAVAISPDRTQIAFCRANP DGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMP HALPDGSVLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSVAVVDDALLYVRALQSPDNER GAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62276; Mature: 62276
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCC SPTTEPSATPTRTVGPSPTKGASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVPPAAAQLLAGDSAIASVIQID HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHCCCHHHEEEEEEE LPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAI CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEEEEEE ESAVAISPDRTQIAFCRANPDGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGII CEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEECCCCEE WFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMPHALPDGSVLTVGHTDGGQGG EEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCC LLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCHH DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSV HHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCE AVVDDALLYVRALQSPDNERGAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK EHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCC SPTTEPSATPTRTVGPSPTKGASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVPPAAAQLLAGDSAIASVIQID HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHCCCHHHEEEEEEE LPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAI CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEEEEEE ESAVAISPDRTQIAFCRANPDGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGII CEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEECCCCEE WFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMPHALPDGSVLTVGHTDGGQGG EEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCC LLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCHH DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSV HHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCE AVVDDALLYVRALQSPDNERGAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK EHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA