Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900551

Identifier: 159900551

GI number: 159900551

Start: 5154098

End: 5155888

Strand: Reverse

Name: 159900551

Synonym: Haur_4038

Alternate gene names: NA

Gene position: 5155888-5154098 (Counterclockwise)

Preceding gene: 159900552

Following gene: 159900550

Centisome position: 81.24

GC content: 55.22

Gene sequence:

>1791_bases
TTGAAGTTGTTGTTACGGCAACGTGTGAGTTTAGCCTTGGTTGTTGTGGCGCTCGCAGCATGTCAACAAGCCCCACAGCC
CACTGCTCGCCCGTTACAAAATGAGCTAACTATTCTCGCCTTAACTCCGACAGGCACGGCTACTCCTACGGCAACGGTGA
CATTAACGCCTGCACCTGCGTCGCCAACAACCGAGCCTTCGGCTACCCCAACCCGCACAGTTGGCCCTTCGCCTACCAAA
GGCGCTTCTCCAACCGCTGGCCCTTCACCAGTCGGTACACCTCGGGCCACTCCCGCGAGTACCCCAACTGCCAATCAAAG
CAGTAGTTTTTGTACGCAGCCATTTGGGGCGGTAACCGACGAGCGCTTCAGCGCCCGCTTAAATAACGCTGGGCTTGATC
GCACGCCCAATGGCGATCGCTTATTCTTAGAATTAACCTCCAGCAGCGGCCCCGTCAACGGTGTCGTGCGCTGTGTGCCT
CCAGCAGCGGCCCAATTGCTCGCAGGCGATAGCGCAATTGCCAGCGTGATTCAAATCGATCTGCCGCTATGGCGACACGA
TGATCTCTGGCGTTCATCGTCGGTCACGCTCACCAAAGTGCTCAAACTTGATACGCTGCAACATGTACGCTCAGTCGTTT
CGCAATCTAGCAGCGATTCAGCTGGGGTATTAATTGAAATTGGGCTGGATCAGGCTTTGCCATTTACGGTGCAGCTCGAT
GGCGGACGCTTAAATGTGGTGATTGCTGATAGCGCTACCGCCACGCTGGGCGATGATCCACTAGCCAAGAGCAATGGTTC
ACCCAGCGCACCCAAGCAACCAGTTGTGTTTGCCAGCAAAGGCGATTTGTATCGCTACGAAAGCTCGCGAGTCGTGCCAA
TTACCACAACCTTGGCAATTGAAAGTGCAGTGGCAATCAGCCCTGATCGTACCCAAATTGCCTTCTGTCGCGCCAACCCC
GATGGCTTGCCAACCCAAGGCGCACTCTGGACCAGCACAATTGATGGCGATAATGAAACCTTGGTCGCTGATGTTGGTGG
TTGTGCCGAGCCTGCTTGGTCGCTTGATGGCGGGATCATTTGGTTTACTGCCCCTTGGAGCGATGCGGCCCCTGATAGCT
ATCGACTCTGGCAGGTGAAAGCCAATGGCGGCGATGCGAGCGCGGTCTCGCCGCTCGACGAGTGGAGCCGCCGTATGCCG
CATGCCTTGCCCGATGGCTCAGTACTGACGGTTGGCCATACCGATGGCGGTCAAGGTGGCTTGTTGATCAGTAATCCGTT
GAGTGGCACTGATGGATTGCTTGGCCAAGCGAGCTTGGGCAATTATCGCAGCGTTGGTCAAGCCCAAGTTTCGGCTGATG
GCACCCGGATTGCCGTCGAAGCGCTCCGAGCTGATGGTGGCGCGGATCTCTTGGTGCTCGACCAAACTGGGAAGCAACTC
GATGCAATTACCGACCAATGGTGGGTACGCCCGCTCTCGTGGAGCAGCGATAACAAACTCTACTATTTAAATGTGGCTTG
TCGTAGCGGCCAAGTATTGAATTATAGCCTGCACAGTCGCCAAGGCAGCAACGATAGTCAAATTATCAAAGGTGCAACCC
TTGGCGATTTAGGTTCAGTCGCTGTGGTTGATGATGCGCTGTTGTATGTTCGGGCTTTACAATCGCCCGACAACGAACGT
GGTGCAGAGCCTATGATTAGCGGCCCTAGCGAGTTGTGGTTGTATGATCTTTCGAATACAGCTCGTACCCGCCTGATTGC
CGCCGATGATGGAATTACCAGCGTCAAGTAA

Upstream 100 bases:

>100_bases
ATTACAGCGCGGCTGGATTAAAATTGTGCAAAACGATAATTCGTTTTCTGGCATGTAATTGCGGCGTTAGCGCCGATTTG
GATTGTCCAAGGAGTGTCGT

Downstream 100 bases:

>100_bases
GCCTAGATTGCATCGATAGTTTGGGGCAAGTCGCAGGACTTGCCCTTTTTGCTCATAAAAGATGGTGTTTATGTTTCAAG
CACTGTATAGCTTGCCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPASPTTEPSATPTRTVGPSPTK
GASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTDERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVP
PAAAQLLAGDSAIASVIQIDLPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD
GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAIESAVAISPDRTQIAFCRANP
DGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMP
HALPDGSVLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL
DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSVAVVDDALLYVRALQSPDNER
GAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK

Sequences:

>Translated_596_residues
MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPASPTTEPSATPTRTVGPSPTK
GASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTDERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVP
PAAAQLLAGDSAIASVIQIDLPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD
GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAIESAVAISPDRTQIAFCRANP
DGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMP
HALPDGSVLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL
DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSVAVVDDALLYVRALQSPDNER
GAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK
>Mature_596_residues
MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPASPTTEPSATPTRTVGPSPTK
GASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTDERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVP
PAAAQLLAGDSAIASVIQIDLPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD
GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAIESAVAISPDRTQIAFCRANP
DGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMP
HALPDGSVLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL
DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSVAVVDDALLYVRALQSPDNER
GAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62276; Mature: 62276

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCC
SPTTEPSATPTRTVGPSPTKGASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVPPAAAQLLAGDSAIASVIQID
HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHCCCHHHEEEEEEE
LPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC
GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAI
CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEEEEEE
ESAVAISPDRTQIAFCRANPDGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGII
CEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEECCCCEE
WFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMPHALPDGSVLTVGHTDGGQGG
EEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCC
LLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL
EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCHH
DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSV
HHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCE
AVVDDALLYVRALQSPDNERGAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK
EHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKLLLRQRVSLALVVVALAACQQAPQPTARPLQNELTILALTPTGTATPTATVTLTPAPA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCC
SPTTEPSATPTRTVGPSPTKGASPTAGPSPVGTPRATPASTPTANQSSSFCTQPFGAVTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ERFSARLNNAGLDRTPNGDRLFLELTSSSGPVNGVVRCVPPAAAQLLAGDSAIASVIQID
HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHCCCHHHEEEEEEE
LPLWRHDDLWRSSSVTLTKVLKLDTLQHVRSVVSQSSSDSAGVLIEIGLDQALPFTVQLD
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC
GGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYRYESSRVVPITTTLAI
CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEEEEEE
ESAVAISPDRTQIAFCRANPDGLPTQGALWTSTIDGDNETLVADVGGCAEPAWSLDGGII
CEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEECCCCEE
WFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMPHALPDGSVLTVGHTDGGQGG
EEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCC
LLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRADGGADLLVLDQTGKQL
EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCHH
DAITDQWWVRPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDLGSV
HHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCE
AVVDDALLYVRALQSPDNERGAEPMISGPSELWLYDLSNTARTRLIAADDGITSVK
EHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA