| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900534
Identifier: 159900534
GI number: 159900534
Start: 5131741
End: 5133042
Strand: Direct
Name: 159900534
Synonym: Haur_4021
Alternate gene names: NA
Gene position: 5131741-5133042 (Clockwise)
Preceding gene: 159900533
Following gene: 159900535
Centisome position: 80.86
GC content: 46.77
Gene sequence:
>1302_bases ATGACGAGTATGGTTGCTGCTTCGCCGAATCCTTTGTATGCTGCTTCAGCCTTTGTTGATGTGTATCCATTTGTGCGTCA GCAAGAGAGCGAAGAAGAGTTATTAATTGGGCGAGTTGATACTAATAATTTTATTATGCTGCCGAAAGAGGCAGTCGAGG TTTTGGATGATTTGGCGCAGGGCAAGAGTGTTGGTGAAGCCCAAGCCCTCTATGCCGAACGCTACGGCGAAATCCCCGAT CTGGCCGATTTGCTTGAACAATTAGAATCTGAAGGTTTTGTTCAGCCACTGCATTCCGATACAGTGCGTTTTGGTCAACA ATCCCCCGTAACTGCTGCTACTGCTAGCGCCAACCCCAATCAACCACGTGCTGTACGCTTTCACTTTACCTTCTTTCCAA TCCGTTTGGCTCAAGTGTTGTTCAGCCCGATCTTACTGGTTTGCTATGCGCTCTTTATTGGTGGGGCGGCGGCAATCGTT GTAGCTCAACCATCAATTGTGGCCGGCTGGCGAGCCATGGTCGTCGATCAACAAATGGCGCTCTTTACCTTGATCATCAT GCTGCATGGGTTTGTGATCACCTTTTTCCATGAGCTTGGGCATGCGGTGGCGGCCCGTTCGCGGGGAGTCGATGTGCGCT TTGGCATTGGGCGACGTTTATGGGTGATTGTGGCTGAAACTGATATGTCAGGCATTTGGTCGATTCAGCGCAACCTGCGA TTTTTACCAATTTTTGCCGGCATGATTGTCGATTTGCTCAGTGCAGCAATTATGGTCTACCTCGCATTTATGCATCAACG CCAAATCATTAATCTTTCTGATTTTGGCTATATCTTGGTGCGGGCGTTTATGTGGAGCTACCTGCTGAATTTGCTGTTTC AATTTTATTTCTTTGTGCGCACCGACATCTACTATGTCCTCTCGACATGGCTTCGTTGCTCAAACTTAATGGGCGATACA GCAAATTATATGATCAATCGTTTCAATCGTTTATTGGGACGCGCTGAAGTTCATAATCAGGCAGCTATTCCTGAACGTGA GCGCAAGATTATCAAACGATATGCCTTTTTCTGGCTAATTGGGCGGATGCTGGCGTTTTATTCACTCTTCTTCTTAACCC TGCCAATTTTATGGAGCTATGCCAGCATTTTATTTGAACGAATGTTTGGTAGCGCCAGCGCTGGTATGCAGGTGCTCGAT TCAATTTTGGCAGCCATTTTGATCTTTATTAGCCAAGCTGTTGGAATTTTCCTCTGGCTTTGGAGCTTGATCCGCAGAAA GGTTAGCGTCGATGACATCTAA
Upstream 100 bases:
>100_bases TCGGCCCAATCTTAGAAAATTAGGCCAAGCTAATATGTGAGTAAGCGAGCAGGAGAAGGTTTTGGTTAATCCCAAACACT AGAAGGGTGGGTCTGGTGCT
Downstream 100 bases:
>100_bases TACCAAGCAATTAATCATTTGGGTTGGCAATGCTGGCGAGCAACGAACTCAGGCTGCTCAAGCATGGTTAGCTGACCAAA CTGCGGCACGAACTTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTSMVAASPNPLYAASAFVDVYPFVRQQESEEELLIGRVDTNNFIMLPKEAVEVLDDLAQGKSVGEAQALYAERYGEIPD LADLLEQLESEGFVQPLHSDTVRFGQQSPVTAATASANPNQPRAVRFHFTFFPIRLAQVLFSPILLVCYALFIGGAAAIV VAQPSIVAGWRAMVVDQQMALFTLIIMLHGFVITFFHELGHAVAARSRGVDVRFGIGRRLWVIVAETDMSGIWSIQRNLR FLPIFAGMIVDLLSAAIMVYLAFMHQRQIINLSDFGYILVRAFMWSYLLNLLFQFYFFVRTDIYYVLSTWLRCSNLMGDT ANYMINRFNRLLGRAEVHNQAAIPERERKIIKRYAFFWLIGRMLAFYSLFFLTLPILWSYASILFERMFGSASAGMQVLD SILAAILIFISQAVGIFLWLWSLIRRKVSVDDI
Sequences:
>Translated_433_residues MTSMVAASPNPLYAASAFVDVYPFVRQQESEEELLIGRVDTNNFIMLPKEAVEVLDDLAQGKSVGEAQALYAERYGEIPD LADLLEQLESEGFVQPLHSDTVRFGQQSPVTAATASANPNQPRAVRFHFTFFPIRLAQVLFSPILLVCYALFIGGAAAIV VAQPSIVAGWRAMVVDQQMALFTLIIMLHGFVITFFHELGHAVAARSRGVDVRFGIGRRLWVIVAETDMSGIWSIQRNLR FLPIFAGMIVDLLSAAIMVYLAFMHQRQIINLSDFGYILVRAFMWSYLLNLLFQFYFFVRTDIYYVLSTWLRCSNLMGDT ANYMINRFNRLLGRAEVHNQAAIPERERKIIKRYAFFWLIGRMLAFYSLFFLTLPILWSYASILFERMFGSASAGMQVLD SILAAILIFISQAVGIFLWLWSLIRRKVSVDDI >Mature_432_residues TSMVAASPNPLYAASAFVDVYPFVRQQESEEELLIGRVDTNNFIMLPKEAVEVLDDLAQGKSVGEAQALYAERYGEIPDL ADLLEQLESEGFVQPLHSDTVRFGQQSPVTAATASANPNQPRAVRFHFTFFPIRLAQVLFSPILLVCYALFIGGAAAIVV AQPSIVAGWRAMVVDQQMALFTLIIMLHGFVITFFHELGHAVAARSRGVDVRFGIGRRLWVIVAETDMSGIWSIQRNLRF LPIFAGMIVDLLSAAIMVYLAFMHQRQIINLSDFGYILVRAFMWSYLLNLLFQFYFFVRTDIYYVLSTWLRCSNLMGDTA NYMINRFNRLLGRAEVHNQAAIPERERKIIKRYAFFWLIGRMLAFYSLFFLTLPILWSYASILFERMFGSASAGMQVLDS ILAAILIFISQAVGIFLWLWSLIRRKVSVDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49161; Mature: 49030
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMVAASPNPLYAASAFVDVYPFVRQQESEEELLIGRVDTNNFIMLPKEAVEVLDDLAQ CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHC GKSVGEAQALYAERYGEIPDLADLLEQLESEGFVQPLHSDTVRFGQQSPVTAATASANPN CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEECCCCCC QPRAVRFHFTFFPIRLAQVLFSPILLVCYALFIGGAAAIVVAQPSIVAGWRAMVVDQQMA CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHH LFTLIIMLHGFVITFFHELGHAVAARSRGVDVRFGIGRRLWVIVAETDMSGIWSIQRNLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHCCC FLPIFAGMIVDLLSAAIMVYLAFMHQRQIINLSDFGYILVRAFMWSYLLNLLFQFYFFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDIYYVLSTWLRCSNLMGDTANYMINRFNRLLGRAEVHNQAAIPERERKIIKRYAFFWLI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH GRMLAFYSLFFLTLPILWSYASILFERMFGSASAGMQVLDSILAAILIFISQAVGIFLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSLIRRKVSVDDI HHHHHHHCCCCCC >Mature Secondary Structure TSMVAASPNPLYAASAFVDVYPFVRQQESEEELLIGRVDTNNFIMLPKEAVEVLDDLAQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHC GKSVGEAQALYAERYGEIPDLADLLEQLESEGFVQPLHSDTVRFGQQSPVTAATASANPN CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEECCCCCC QPRAVRFHFTFFPIRLAQVLFSPILLVCYALFIGGAAAIVVAQPSIVAGWRAMVVDQQMA CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHH LFTLIIMLHGFVITFFHELGHAVAARSRGVDVRFGIGRRLWVIVAETDMSGIWSIQRNLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHCCC FLPIFAGMIVDLLSAAIMVYLAFMHQRQIINLSDFGYILVRAFMWSYLLNLLFQFYFFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDIYYVLSTWLRCSNLMGDTANYMINRFNRLLGRAEVHNQAAIPERERKIIKRYAFFWLI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH GRMLAFYSLFFLTLPILWSYASILFERMFGSASAGMQVLDSILAAILIFISQAVGIFLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSLIRRKVSVDDI HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA