Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900533

Identifier: 159900533

GI number: 159900533

Start: 5128378

End: 5129307

Strand: Direct

Name: 159900533

Synonym: Haur_4020

Alternate gene names: NA

Gene position: 5128378-5129307 (Clockwise)

Preceding gene: 159900529

Following gene: 159900534

Centisome position: 80.81

GC content: 49.25

Gene sequence:

>930_bases
ATGAGCAACTGGGAAAAGACGTTTGGTAAGCGCGATTTACCAACACCACCAGCATGGGTCAATTTTTTCAATCCACAGCA
ATGGCAAGATTTTCGCCAAATCGTGGAGCGTTATTTGAAAAATCTTGGTTTGCCCGTGCGGCCTGAAAACCAAGGCTTTG
TGGTGCTTGCTGACCATGCAGGGTGGAGTAAAGATACCCGCATTGGGTTAAGCTCACTGGCTCAAAAATGCTATGCCCAT
CCCCAATCGCAATGGCTGGCAGTTATTACCGATCATTTTGAGGCAATGCACAAGGGTTTTGAAAACGAAGTGCTCTTGCA
AGATGAAATAAACGATTTTGAAAGTATTCGCGATTTGTTGGCAATTCGCTTGTGGGCCTTGGAGCCTGAGTTACGCGAGA
AGCTGATTTATCGCGAAGATTTACAGGATGTCTGCTCGGTGCTGGTGTTTGATTTGCCCACCACGATTCGTAGCGTAAGC
AGCGACGAAGCGATGGCTTGGGGCAAAACCAACGAGGAATTGTTTGCGGTCGCCTTGGAAAACTTGCGTGGGCGTGAGTT
GCGCCTCACCGAACATGAACTGGACGATGGCATTAACGTGCTAGCTATCACTGGCGACGATTTCTTGATTGGTTCGCAAA
GCCTGTTGCTTGAGCAATACCCGCAATGTGTCGGGCGTTTCGGCTCGTTGGTAGCAGTGCCCAATCGCCATGTGGTGCTA
TGCTATCCCATTAATGAGCCAATTGCCTTGGAAGCTTGGACGAGCATGTTACCAGTCGTGGAAGGCATGTATCGCAATGG
GCCTGGCTCGATCTCCAATCAGGTTTTTTGGTACGATAACGGTGCATTTACCCACTTGCCCCACTCGCAAGAGCAGCAAG
CGGTGCGTTTATCGCCGCCAACTACCTTTTTAACGACCTTTCAAGAATAG

Upstream 100 bases:

>100_bases
GATGGCAACGCTCGGCTATACTTTGGTCATCCTGCTGCCATACCAAATGCTTGGTGTGTTTGGGCGTTGGTAGCAGCGTC
AGCGTTTATAGGGGGGAACC

Downstream 100 bases:

>100_bases
AAGCTCAAACCAGATTAAAATTCGCTAGCCTGCTGTTGCCAGAAGGGTCAACAGCAGGTTTTTTGTTGTTTAATTGATAA
GGTACACACTGCAACTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSNWEKTFGKRDLPTPPAWVNFFNPQQWQDFRQIVERYLKNLGLPVRPENQGFVVLADHAGWSKDTRIGLSSLAQKCYAH
PQSQWLAVITDHFEAMHKGFENEVLLQDEINDFESIRDLLAIRLWALEPELREKLIYREDLQDVCSVLVFDLPTTIRSVS
SDEAMAWGKTNEELFAVALENLRGRELRLTEHELDDGINVLAITGDDFLIGSQSLLLEQYPQCVGRFGSLVAVPNRHVVL
CYPINEPIALEAWTSMLPVVEGMYRNGPGSISNQVFWYDNGAFTHLPHSQEQQAVRLSPPTTFLTTFQE

Sequences:

>Translated_309_residues
MSNWEKTFGKRDLPTPPAWVNFFNPQQWQDFRQIVERYLKNLGLPVRPENQGFVVLADHAGWSKDTRIGLSSLAQKCYAH
PQSQWLAVITDHFEAMHKGFENEVLLQDEINDFESIRDLLAIRLWALEPELREKLIYREDLQDVCSVLVFDLPTTIRSVS
SDEAMAWGKTNEELFAVALENLRGRELRLTEHELDDGINVLAITGDDFLIGSQSLLLEQYPQCVGRFGSLVAVPNRHVVL
CYPINEPIALEAWTSMLPVVEGMYRNGPGSISNQVFWYDNGAFTHLPHSQEQQAVRLSPPTTFLTTFQE
>Mature_308_residues
SNWEKTFGKRDLPTPPAWVNFFNPQQWQDFRQIVERYLKNLGLPVRPENQGFVVLADHAGWSKDTRIGLSSLAQKCYAHP
QSQWLAVITDHFEAMHKGFENEVLLQDEINDFESIRDLLAIRLWALEPELREKLIYREDLQDVCSVLVFDLPTTIRSVSS
DEAMAWGKTNEELFAVALENLRGRELRLTEHELDDGINVLAITGDDFLIGSQSLLLEQYPQCVGRFGSLVAVPNRHVVLC
YPINEPIALEAWTSMLPVVEGMYRNGPGSISNQVFWYDNGAFTHLPHSQEQQAVRLSPPTTFLTTFQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35344; Mature: 35213

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNWEKTFGKRDLPTPPAWVNFFNPQQWQDFRQIVERYLKNLGLPVRPENQGFVVLADHA
CCCHHHHCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
GWSKDTRIGLSSLAQKCYAHPQSQWLAVITDHFEAMHKGFENEVLLQDEINDFESIRDLL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
AIRLWALEPELREKLIYREDLQDVCSVLVFDLPTTIRSVSSDEAMAWGKTNEELFAVALE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCHHHHHHHHH
NLRGRELRLTEHELDDGINVLAITGDDFLIGSQSLLLEQYPQCVGRFGSLVAVPNRHVVL
HCCCCEEEEHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHCCEEECCCCCEEE
CYPINEPIALEAWTSMLPVVEGMYRNGPGSISNQVFWYDNGAFTHLPHSQEQQAVRLSPP
EEECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCCCCCEEEECCC
TTFLTTFQE
CEEEEECCC
>Mature Secondary Structure 
SNWEKTFGKRDLPTPPAWVNFFNPQQWQDFRQIVERYLKNLGLPVRPENQGFVVLADHA
CCHHHHCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
GWSKDTRIGLSSLAQKCYAHPQSQWLAVITDHFEAMHKGFENEVLLQDEINDFESIRDLL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
AIRLWALEPELREKLIYREDLQDVCSVLVFDLPTTIRSVSSDEAMAWGKTNEELFAVALE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCHHHHHHHHH
NLRGRELRLTEHELDDGINVLAITGDDFLIGSQSLLLEQYPQCVGRFGSLVAVPNRHVVL
HCCCCEEEEHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHCCEEECCCCCEEE
CYPINEPIALEAWTSMLPVVEGMYRNGPGSISNQVFWYDNGAFTHLPHSQEQQAVRLSPP
EEECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCCCCCEEEECCC
TTFLTTFQE
CEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA