The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900499

Identifier: 159900499

GI number: 159900499

Start: 5085132

End: 5086451

Strand: Direct

Name: 159900499

Synonym: Haur_3986

Alternate gene names: NA

Gene position: 5085132-5086451 (Clockwise)

Preceding gene: 159900498

Following gene: 159900500

Centisome position: 80.12

GC content: 51.36

Gene sequence:

>1320_bases
ATGACCAGTTATAGCATCACTGGGCGGGTGGTTCGGACGATTGATCTTGCGCCGCTTGCCAACATTAGCGTGCGGTTTAT
CTCACAAGCAGGCTATCTGAGCAATGTGGCCAATCGCAGCCTTTTGCCAGCAGGCCAGGTCGATTGGACGCGCTCGCTGA
CAGGGTTTAGTGGCACGCGCTGGGAATGTTGGGAGCAGCAGATCAACAGCAAAGTAGCAATTGCTTGGGGCGATTTTCGC
GATGGTGCGCTGATCTACAACCCACATTTGAGCGATGATGGACGGGTGTTTCATAGCGATAAAACCTATTTGATGCCCGA
AGTTTCGCCAGCCCAAGAAGTGAGCTGGACGCGCCAAATCACTGGGTTTGCTGGCTCGCGTTGGGATTGCTGGGTACAAT
ATATCGATAAGCGTGTGCCAATTAGCTGGGAATCGTTTCGAGATAATGCTTTGATTCATAATCCCCAACTGGCGGCTGAT
GGACGTTTATTCCAAACCGCCAAAACCTATCTGATTCCCGATGTCGCGCCAGTGGCCCGTGCTGCCTGCGAAGTCAAAAC
CGATGCTCAAGGCAATTATCGCTTTGACAATATTGGAGCAGGCGCGGTTGGCTTGCTCGAAGTCAATGTGGCTGGTTATA
CGCCTGTTCGCGTGCCAGTAATTGTCAACAATACAATTAATCAACCGATCAATGTGCGCGGTGGTGGCAGCGGTGTGCGT
TCGGCTCACCCTAGCTATAATGCTTTACATCCCAAAGTGCGGGCGATTATTGATCAAGCCTTGTTTATGCTGGGCGATGA
AAAAACCGTCTACGATGCGCTGCCCACGAATTTGCAACAAATGTGTTATGGAGCGCAATTCGCCAGCAATCCCAATCATC
AATACTACAAAGATATTGTTTGTGCCGATTTGGTGAGCATTTGTTTGGCCGCAGCAGGCTTTAATGTCAATTGGAACAGC
GGAGCCAATCCCCATATGGCCCAGCATTATGCACCCGGCCCCGCCACCCTGCAAGAAATTACCGATGCCAACGATTGGCA
ACCAGGCGATGTGTTGGTATTTGGCAATAATGGCGCGGCGCGAGCTGGCCATGTGACGTTGTATGTTGGCCCTTTCCAAG
GCACCGATCGTTCAGGCACAAACTATTCGTTGAGCGCCAATTTCGATGTGGTTGAGGCCAGCATGAACTTTGACCTTGCC
AATGGCCAGCGTTGGGGCTTGGGCAACATCGCCACCACCCGCCAACAATGTTTACAAGGCAAACGTGGCTATCAATGGGT
CAAGCGGGTGCGTTTGAAAGAAGTCGCAGCATTAATCTAA

Upstream 100 bases:

>100_bases
CCCTCATCCTTCATCCCTCATACTTTCCTTGGGCTATTGCAATCTCCGAGCGCCGCCGCTACCATTGAACTACGAAAGCA
TCTAGTAGGGAGCCAACGGC

Downstream 100 bases:

>100_bases
TATTGCTGCGCTCAAATGAAGTGACGATCTGCAACCGATTGCTGATTCGCAGGTGGGCTAAACTGCGCTACAATGGGGCA
TATCGTCATTTCTCAATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTSYSITGRVVRTIDLAPLANISVRFISQAGYLSNVANRSLLPAGQVDWTRSLTGFSGTRWECWEQQINSKVAIAWGDFR
DGALIYNPHLSDDGRVFHSDKTYLMPEVSPAQEVSWTRQITGFAGSRWDCWVQYIDKRVPISWESFRDNALIHNPQLAAD
GRLFQTAKTYLIPDVAPVARAACEVKTDAQGNYRFDNIGAGAVGLLEVNVAGYTPVRVPVIVNNTINQPINVRGGGSGVR
SAHPSYNALHPKVRAIIDQALFMLGDEKTVYDALPTNLQQMCYGAQFASNPNHQYYKDIVCADLVSICLAAAGFNVNWNS
GANPHMAQHYAPGPATLQEITDANDWQPGDVLVFGNNGAARAGHVTLYVGPFQGTDRSGTNYSLSANFDVVEASMNFDLA
NGQRWGLGNIATTRQQCLQGKRGYQWVKRVRLKEVAALI

Sequences:

>Translated_439_residues
MTSYSITGRVVRTIDLAPLANISVRFISQAGYLSNVANRSLLPAGQVDWTRSLTGFSGTRWECWEQQINSKVAIAWGDFR
DGALIYNPHLSDDGRVFHSDKTYLMPEVSPAQEVSWTRQITGFAGSRWDCWVQYIDKRVPISWESFRDNALIHNPQLAAD
GRLFQTAKTYLIPDVAPVARAACEVKTDAQGNYRFDNIGAGAVGLLEVNVAGYTPVRVPVIVNNTINQPINVRGGGSGVR
SAHPSYNALHPKVRAIIDQALFMLGDEKTVYDALPTNLQQMCYGAQFASNPNHQYYKDIVCADLVSICLAAAGFNVNWNS
GANPHMAQHYAPGPATLQEITDANDWQPGDVLVFGNNGAARAGHVTLYVGPFQGTDRSGTNYSLSANFDVVEASMNFDLA
NGQRWGLGNIATTRQQCLQGKRGYQWVKRVRLKEVAALI
>Mature_438_residues
TSYSITGRVVRTIDLAPLANISVRFISQAGYLSNVANRSLLPAGQVDWTRSLTGFSGTRWECWEQQINSKVAIAWGDFRD
GALIYNPHLSDDGRVFHSDKTYLMPEVSPAQEVSWTRQITGFAGSRWDCWVQYIDKRVPISWESFRDNALIHNPQLAADG
RLFQTAKTYLIPDVAPVARAACEVKTDAQGNYRFDNIGAGAVGLLEVNVAGYTPVRVPVIVNNTINQPINVRGGGSGVRS
AHPSYNALHPKVRAIIDQALFMLGDEKTVYDALPTNLQQMCYGAQFASNPNHQYYKDIVCADLVSICLAAAGFNVNWNSG
ANPHMAQHYAPGPATLQEITDANDWQPGDVLVFGNNGAARAGHVTLYVGPFQGTDRSGTNYSLSANFDVVEASMNFDLAN
GQRWGLGNIATTRQQCLQGKRGYQWVKRVRLKEVAALI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48232; Mature: 48101

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYSITGRVVRTIDLAPLANISVRFISQAGYLSNVANRSLLPAGQVDWTRSLTGFSGTR
CCCCCCCCEEEEEEECCCCCCCEEEEEHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCC
WECWEQQINSKVAIAWGDFRDGALIYNPHLSDDGRVFHSDKTYLMPEVSPAQEVSWTRQI
HHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHH
TGFAGSRWDCWVQYIDKRVPISWESFRDNALIHNPQLAADGRLFQTAKTYLIPDVAPVAR
CCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCEEEHHHHHCCCCHHHHHH
AACEVKTDAQGNYRFDNIGAGAVGLLEVNVAGYTPVRVPVIVNNTINQPINVRGGGSGVR
HHHEEECCCCCCEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCC
SAHPSYNALHPKVRAIIDQALFMLGDEKTVYDALPTNLQQMCYGAQFASNPNHQYYKDIV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHCCHHCCCCCHHHHHHHH
CADLVSICLAAAGFNVNWNSGANPHMAQHYAPGPATLQEITDANDWQPGDVLVFGNNGAA
HHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCC
RAGHVTLYVGPFQGTDRSGTNYSLSANFDVVEASMNFDLANGQRWGLGNIATTRQQCLQG
CCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEEECEEECCCCCCCCCCHHHHHHHHHCC
KRGYQWVKRVRLKEVAALI
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSYSITGRVVRTIDLAPLANISVRFISQAGYLSNVANRSLLPAGQVDWTRSLTGFSGTR
CCCCCCCEEEEEEECCCCCCCEEEEEHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCC
WECWEQQINSKVAIAWGDFRDGALIYNPHLSDDGRVFHSDKTYLMPEVSPAQEVSWTRQI
HHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHH
TGFAGSRWDCWVQYIDKRVPISWESFRDNALIHNPQLAADGRLFQTAKTYLIPDVAPVAR
CCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCEEEHHHHHCCCCHHHHHH
AACEVKTDAQGNYRFDNIGAGAVGLLEVNVAGYTPVRVPVIVNNTINQPINVRGGGSGVR
HHHEEECCCCCCEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCC
SAHPSYNALHPKVRAIIDQALFMLGDEKTVYDALPTNLQQMCYGAQFASNPNHQYYKDIV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHCCHHCCCCCHHHHHHHH
CADLVSICLAAAGFNVNWNSGANPHMAQHYAPGPATLQEITDANDWQPGDVLVFGNNGAA
HHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCC
RAGHVTLYVGPFQGTDRSGTNYSLSANFDVVEASMNFDLANGQRWGLGNIATTRQQCLQG
CCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEEECEEECCCCCCCCCCHHHHHHHHHCC
KRGYQWVKRVRLKEVAALI
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA