The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900446

Identifier: 159900446

GI number: 159900446

Start: 4925688

End: 4926230

Strand: Direct

Name: 159900446

Synonym: Haur_3931

Alternate gene names: NA

Gene position: 4925688-4926230 (Clockwise)

Preceding gene: 159900440

Following gene: 159900447

Centisome position: 77.61

GC content: 49.54

Gene sequence:

>543_bases
ATGACCGATCTAGCCCAATATCACCCATTGTTGGTTCATGCTCCATTGATGCTGTTGCCCACTGCGATTTTATTGCGCGT
GTTACACTTGATTTGGCCCAAAGCTGGCTTTCGCTTAACGGCGATCGTATTGTTAGTTGCAGGCATTGGGCTGGGGATTT
TATCCGAGGAAAGTGGCGAGGCAGCTGAGCATGTCGCCGAAGCACGATCGGCCAATGTTGAAGATATTCAAGCAACTGGC
ACAATTCCGGAAATGTTTGGCGAAGGCTCACTTTTAGAAACCCATGCCTCCTTGGCCGAAACAACCGTCATCGTCTTTAT
GTTGTTGCTGATTAGCGAAGCGATGTTGCTATTCCTAAGTCAACCATTGTTCGCCCGCTGGCGCGGATCTTTCAGCTTGC
CAAGCGGCTTGCACAAACCCTTGGAAATTGGCTGGGTGGTCGTTGGGGTTGCCGCAATTGCCTTGGTGGTTTTAACAGGC
CATTATGGTGGTAAGCTGGTCTATGAGCATGGGATTGGCGTTTCATTGAGTGCAATGCAATAA

Upstream 100 bases:

>100_bases
TTGGAATATTCTTGACGAAGCTTGTGAATTTTCCAAGAATCTTCCAAGAATTAATTATTAGAGTAAGAGCATCACTTTTA
TGGTTTATCGGAGGTTGCTC

Downstream 100 bases:

>100_bases
GGAACGAGCATGCGGGTGTTGCTAATTGAAGATGATCGCAAATTGGCCCGCTTGATCGAGCGAGCACTACGCGACGAACA
TCATCAGGTCGATGTGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTDLAQYHPLLVHAPLMLLPTAILLRVLHLIWPKAGFRLTAIVLLVAGIGLGILSEESGEAAEHVAEARSANVEDIQATG
TIPEMFGEGSLLETHASLAETTVIVFMLLLISEAMLLFLSQPLFARWRGSFSLPSGLHKPLEIGWVVVGVAAIALVVLTG
HYGGKLVYEHGIGVSLSAMQ

Sequences:

>Translated_180_residues
MTDLAQYHPLLVHAPLMLLPTAILLRVLHLIWPKAGFRLTAIVLLVAGIGLGILSEESGEAAEHVAEARSANVEDIQATG
TIPEMFGEGSLLETHASLAETTVIVFMLLLISEAMLLFLSQPLFARWRGSFSLPSGLHKPLEIGWVVVGVAAIALVVLTG
HYGGKLVYEHGIGVSLSAMQ
>Mature_179_residues
TDLAQYHPLLVHAPLMLLPTAILLRVLHLIWPKAGFRLTAIVLLVAGIGLGILSEESGEAAEHVAEARSANVEDIQATGT
IPEMFGEGSLLETHASLAETTVIVFMLLLISEAMLLFLSQPLFARWRGSFSLPSGLHKPLEIGWVVVGVAAIALVVLTGH
YGGKLVYEHGIGVSLSAMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19223; Mature: 19092

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLAQYHPLLVHAPLMLLPTAILLRVLHLIWPKAGFRLTAIVLLVAGIGLGILSEESGE
CCCHHHHCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
AAEHVAEARSANVEDIQATGTIPEMFGEGSLLETHASLAETTVIVFMLLLISEAMLLFLS
HHHHHHHHHCCCCHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPLFARWRGSFSLPSGLHKPLEIGWVVVGVAAIALVVLTGHYGGKLVYEHGIGVSLSAMQ
CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCC
>Mature Secondary Structure 
TDLAQYHPLLVHAPLMLLPTAILLRVLHLIWPKAGFRLTAIVLLVAGIGLGILSEESGE
CCHHHHCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
AAEHVAEARSANVEDIQATGTIPEMFGEGSLLETHASLAETTVIVFMLLLISEAMLLFLS
HHHHHHHHHCCCCHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPLFARWRGSFSLPSGLHKPLEIGWVVVGVAAIALVVLTGHYGGKLVYEHGIGVSLSAMQ
CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA