Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900440

Identifier: 159900440

GI number: 159900440

Start: 4918574

End: 4918936

Strand: Direct

Name: 159900440

Synonym: Haur_3925

Alternate gene names: NA

Gene position: 4918574-4918936 (Clockwise)

Preceding gene: 159900439

Following gene: 159900446

Centisome position: 77.5

GC content: 55.92

Gene sequence:

>363_bases
ATGGGGATGAAAGACATTTTGGCCAGCGCGATTGAAACCGTACCCGGCGTGAAATTGGCCGGAGTCGTGGGCACAGACGG
GCTGGGCGTTGAAATGCTCCTCAACGATGTTGATGCAAACTTTAGCAAAGATATTGCTGAAGTGGAGCTGGGTGGCCTTG
CTGCCGCCGCTGCGGGAGCCGCCTCGCGCTTAAAGGCTGGCCACGTCCGTGATGTCGCGGTTGAGACCGACAATGCCACC
TACTTGGCATCGCAAATCATCCCCGGCTACTTTGCTGTGTTGGCAGTCAATGGCGGCGGTAATCTTGGCCGCGCCCGTTT
TGCCCTCAAACAATTGGTTGTTAAGCTCCAAGATACCCTATAG

Upstream 100 bases:

>100_bases
GCCGTCGCGAAATGTAAGCCTGCCTTGCAGAGCGGGCGCGGTGTGGTATGATAGCTCAAACATCAGAACTCACTGCACAG
TTTGTTGATAAGGAGCCACT

Downstream 100 bases:

>100_bases
AAACCACCTCACCATAAACCTCTGGCAGCCAACGCTTGGATTTCAGCCAGAGGTTTTTTTGGTTATCAAAAATAAAATCT
ATTGCCGTCGGGCACGGTTT

Product: roadblock/LC7 family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MGMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGAASRLKAGHVRDVAVETDNAT
YLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL

Sequences:

>Translated_120_residues
MGMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGAASRLKAGHVRDVAVETDNAT
YLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL
>Mature_119_residues
GMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGAASRLKAGHVRDVAVETDNATY
LASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12208; Mature: 12077

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGA
CCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHH
ASRLKAGHVRDVAVETDNATYLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL
HHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGA
CHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHH
ASRLKAGHVRDVAVETDNATYLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL
HHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA