| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900440
Identifier: 159900440
GI number: 159900440
Start: 4918574
End: 4918936
Strand: Direct
Name: 159900440
Synonym: Haur_3925
Alternate gene names: NA
Gene position: 4918574-4918936 (Clockwise)
Preceding gene: 159900439
Following gene: 159900446
Centisome position: 77.5
GC content: 55.92
Gene sequence:
>363_bases ATGGGGATGAAAGACATTTTGGCCAGCGCGATTGAAACCGTACCCGGCGTGAAATTGGCCGGAGTCGTGGGCACAGACGG GCTGGGCGTTGAAATGCTCCTCAACGATGTTGATGCAAACTTTAGCAAAGATATTGCTGAAGTGGAGCTGGGTGGCCTTG CTGCCGCCGCTGCGGGAGCCGCCTCGCGCTTAAAGGCTGGCCACGTCCGTGATGTCGCGGTTGAGACCGACAATGCCACC TACTTGGCATCGCAAATCATCCCCGGCTACTTTGCTGTGTTGGCAGTCAATGGCGGCGGTAATCTTGGCCGCGCCCGTTT TGCCCTCAAACAATTGGTTGTTAAGCTCCAAGATACCCTATAG
Upstream 100 bases:
>100_bases GCCGTCGCGAAATGTAAGCCTGCCTTGCAGAGCGGGCGCGGTGTGGTATGATAGCTCAAACATCAGAACTCACTGCACAG TTTGTTGATAAGGAGCCACT
Downstream 100 bases:
>100_bases AAACCACCTCACCATAAACCTCTGGCAGCCAACGCTTGGATTTCAGCCAGAGGTTTTTTTGGTTATCAAAAATAAAATCT ATTGCCGTCGGGCACGGTTT
Product: roadblock/LC7 family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGAASRLKAGHVRDVAVETDNAT YLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL
Sequences:
>Translated_120_residues MGMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGAASRLKAGHVRDVAVETDNAT YLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL >Mature_119_residues GMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGAASRLKAGHVRDVAVETDNATY LASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12208; Mature: 12077
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGA CCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHH ASRLKAGHVRDVAVETDNATYLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL HHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GMKDILASAIETVPGVKLAGVVGTDGLGVEMLLNDVDANFSKDIAEVELGGLAAAAAGA CHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHH ASRLKAGHVRDVAVETDNATYLASQIIPGYFAVLAVNGGGNLGRARFALKQLVVKLQDTL HHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA