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The map label for this gene is 159900406

Identifier: 159900406

GI number: 159900406

Start: 4883611

End: 4884234

Strand: Reverse

Name: 159900406

Synonym: Haur_3891

Alternate gene names: NA

Gene position: 4884234-4883611 (Counterclockwise)

Preceding gene: 159900408

Following gene: 159900405

Centisome position: 76.96

GC content: 51.12

Gene sequence:

>624_bases
ATGGCGCGAGTACGACGTGAGGATTGGTTGCAGCATGGCTTGAGCATTCTCAGCAGCGAATCAGTGGCGGCCTTAACGAT
TGAGCGCCTAACCACCGATCTGGGGGTGACCAAAGGCTCGTTCTATCATCATTTTGGGGGTTGGCCAAGCTACAAAACGG
CGCTGTTGCAGCAATTCGAGCAACAAGACACCTTGGATATTATTCAGCACTTGGCGGGCTATCACGATCCAGCTCAAAAA
TTACGTGCCCTATTCGATTTGCTGACGATTGTGGCAATTTATGCTGCCAACGACCCATGGGATGTGGAGATTGCCATGCG
CGGCTGGGCTGCGGCTGATCCTGAGGTTCGAGCCATGATCGAACGCATCGATCACGTGCGCATAACTTTTGTGGCCGAAC
TGTGTAGCGCGATTACTGGCGATGCTGAGCGCGGTTTGTTAATGGCCCAACACGGCTATAGCATTTTGCTGGGCGCTATT
TTGATGCAACCAATGTTGCCAATGGCTCGTTTACGCCAAATTTATGACGAATTTTTACGTTTATATGCAATTCCAGGAGG
CTCCGATGTCGATCACGCAGCACCCAATTCTGGCACCGCTGATCGCCCAATCGAATCATATTGA

Upstream 100 bases:

>100_bases
ATGTCAAAGCTTTTCATGGATAATATTTTTAGAGTTTTAACCTGATTTGACAATACCATACAGTATGGTATGTTTTAGTT
ATGGCATAACGGAGGCAGCT

Downstream 100 bases:

>100_bases
TGTTAAAACCCGCCAAATTCAGACAACCCAGCCTGAGCATGAGTTACGCCGTTTTATTGCGGCTATGATTGGCTATAACC
CACGTTGGATGCAAAGTTTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulatory Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; TetR-Type Regulator

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MARVRREDWLQHGLSILSSESVAALTIERLTTDLGVTKGSFYHHFGGWPSYKTALLQQFEQQDTLDIIQHLAGYHDPAQK
LRALFDLLTIVAIYAANDPWDVEIAMRGWAAADPEVRAMIERIDHVRITFVAELCSAITGDAERGLLMAQHGYSILLGAI
LMQPMLPMARLRQIYDEFLRLYAIPGGSDVDHAAPNSGTADRPIESY

Sequences:

>Translated_207_residues
MARVRREDWLQHGLSILSSESVAALTIERLTTDLGVTKGSFYHHFGGWPSYKTALLQQFEQQDTLDIIQHLAGYHDPAQK
LRALFDLLTIVAIYAANDPWDVEIAMRGWAAADPEVRAMIERIDHVRITFVAELCSAITGDAERGLLMAQHGYSILLGAI
LMQPMLPMARLRQIYDEFLRLYAIPGGSDVDHAAPNSGTADRPIESY
>Mature_206_residues
ARVRREDWLQHGLSILSSESVAALTIERLTTDLGVTKGSFYHHFGGWPSYKTALLQQFEQQDTLDIIQHLAGYHDPAQKL
RALFDLLTIVAIYAANDPWDVEIAMRGWAAADPEVRAMIERIDHVRITFVAELCSAITGDAERGLLMAQHGYSILLGAIL
MQPMLPMARLRQIYDEFLRLYAIPGGSDVDHAAPNSGTADRPIESY

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23135; Mature: 23004

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVRREDWLQHGLSILSSESVAALTIERLTTDLGVTKGSFYHHFGGWPSYKTALLQQFE
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHH
QQDTLDIIQHLAGYHDPAQKLRALFDLLTIVAIYAANDPWDVEIAMRGWAAADPEVRAMI
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH
ERIDHVRITFVAELCSAITGDAERGLLMAQHGYSILLGAILMQPMLPMARLRQIYDEFLR
HHHHHHHHHHHHHHHHHHCCCHHCCEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LYAIPGGSDVDHAAPNSGTADRPIESY
HHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARVRREDWLQHGLSILSSESVAALTIERLTTDLGVTKGSFYHHFGGWPSYKTALLQQFE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHH
QQDTLDIIQHLAGYHDPAQKLRALFDLLTIVAIYAANDPWDVEIAMRGWAAADPEVRAMI
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH
ERIDHVRITFVAELCSAITGDAERGLLMAQHGYSILLGAILMQPMLPMARLRQIYDEFLR
HHHHHHHHHHHHHHHHHHCCCHHCCEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LYAIPGGSDVDHAAPNSGTADRPIESY
HHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA