| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900405
Identifier: 159900405
GI number: 159900405
Start: 4883148
End: 4883669
Strand: Reverse
Name: 159900405
Synonym: Haur_3890
Alternate gene names: NA
Gene position: 4883669-4883148 (Counterclockwise)
Preceding gene: 159900406
Following gene: 159900404
Centisome position: 76.95
GC content: 50.0
Gene sequence:
>522_bases ATGTCGATCACGCAGCACCCAATTCTGGCACCGCTGATCGCCCAATCGAATCATATTGATGTTAAAACCCGCCAAATTCA GACAACCCAGCCTGAGCATGAGTTACGCCGTTTTATTGCGGCTATGATTGGCTATAACCCACGTTGGATGCAAAGTTTGT ATGCGATTCGTTGGGGCTTTGTGCGCTTATTGGGCATGCGCCAACAAGGCATACCCAACTCAAACCAGCTACGACCTGAA CAAGTGCCCATGCAAGTTGGCCAAAACTTGGGCTTTTTCAAAGTTACAGCCGCTGCCGAAGGCCAATATTTGGTGGCCTC GGCCAGCGAATCGCATCTCACCGCTTGGTTGGCGATTGTGCTGGAGCCGCTTGGTGGCAACAATTACAATTTGCACACGG TCACAATTGTGTGCTATCACGCTTGGACGGGGCCAGTTTATTTCAATGTGATTCGACCATTTCATCATATCGTCGTCAAT CAGATGATCAAGGCTGGTTTGGCGGGTCAGCCAACCACATAG
Upstream 100 bases:
>100_bases TTGCTGGGCGCTATTTTGATGCAACCAATGTTGCCAATGGCTCGTTTACGCCAAATTTATGACGAATTTTTACGTTTATA TGCAATTCCAGGAGGCTCCG
Downstream 100 bases:
>100_bases GAGCAAATGATGTTAGCACGAACAACAATTGTGGGCTTGATTGGTGGGGTAACGGCGTTAATTCATGGGGTTGGCGGCCA ATTAACTGGTATTCAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSITQHPILAPLIAQSNHIDVKTRQIQTTQPEHELRRFIAAMIGYNPRWMQSLYAIRWGFVRLLGMRQQGIPNSNQLRPE QVPMQVGQNLGFFKVTAAAEGQYLVASASESHLTAWLAIVLEPLGGNNYNLHTVTIVCYHAWTGPVYFNVIRPFHHIVVN QMIKAGLAGQPTT
Sequences:
>Translated_173_residues MSITQHPILAPLIAQSNHIDVKTRQIQTTQPEHELRRFIAAMIGYNPRWMQSLYAIRWGFVRLLGMRQQGIPNSNQLRPE QVPMQVGQNLGFFKVTAAAEGQYLVASASESHLTAWLAIVLEPLGGNNYNLHTVTIVCYHAWTGPVYFNVIRPFHHIVVN QMIKAGLAGQPTT >Mature_172_residues SITQHPILAPLIAQSNHIDVKTRQIQTTQPEHELRRFIAAMIGYNPRWMQSLYAIRWGFVRLLGMRQQGIPNSNQLRPEQ VPMQVGQNLGFFKVTAAAEGQYLVASASESHLTAWLAIVLEPLGGNNYNLHTVTIVCYHAWTGPVYFNVIRPFHHIVVNQ MIKAGLAGQPTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19467; Mature: 19336
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITQHPILAPLIAQSNHIDVKTRQIQTTQPEHELRRFIAAMIGYNPRWMQSLYAIRWGF CCCCCCCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VRLLGMRQQGIPNSNQLRPEQVPMQVGQNLGFFKVTAAAEGQYLVASASESHLTAWLAIV HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHH LEPLGGNNYNLHTVTIVCYHAWTGPVYFNVIRPFHHIVVNQMIKAGLAGQPTT HHCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SITQHPILAPLIAQSNHIDVKTRQIQTTQPEHELRRFIAAMIGYNPRWMQSLYAIRWGF CCCCCCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VRLLGMRQQGIPNSNQLRPEQVPMQVGQNLGFFKVTAAAEGQYLVASASESHLTAWLAIV HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHH LEPLGGNNYNLHTVTIVCYHAWTGPVYFNVIRPFHHIVVNQMIKAGLAGQPTT HHCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA