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The map label for this gene is 159900391

Identifier: 159900391

GI number: 159900391

Start: 4867978

End: 4868475

Strand: Reverse

Name: 159900391

Synonym: Haur_3876

Alternate gene names: NA

Gene position: 4868475-4867978 (Counterclockwise)

Preceding gene: 159900395

Following gene: 159900390

Centisome position: 76.71

GC content: 53.01

Gene sequence:

>498_bases
ATGCAACAGCAAACCGAACAATTAAGCGATGGGCAACGATTAAATGCGGCGCAAATTTGGGCATTTTTAGCCAAAGCCGC
AGTTGGCCGCTTGGCAACTCACGATCACGCCCACAATCAGAGCAATCTTACGCCGCTCTTTTTTGTCTGCGAAGCACCGC
ATATTTATTTTGCAACTCAACCTGGCCACAAGCTGAATTTGTTGCGGCGCTATCCCCAAGGCGTGGGCTTACAAGCCGAT
GCCTTTGATCCAGAATCTTCAACCAGTGTCTTTGTTTGGGGGCGCTACCGCGATGTGCCACTGGGCGCGGAGTATGCCCA
TGCCACCCGTTTGCTGGCCTTCAAATATGGCACTGGCTTTTGGCAACAAATTCTTGATCAAGCCACCAAGGCCTTGAAGG
CTGGGCCTCGCGCGGTAATCACGACAATCAGCCAAGCCACCACTGGTTGTATTCAAATCGAACGGATCGGCGGGCGACGC
TGGGAGCATGGCCTATGA

Upstream 100 bases:

>100_bases
TATAGGCGGCGGTTGCGGCAACTAAAATTAGCGATGTACGAAACAAGGTTTTTGGCTGCATAGATACTCTTTTAATCGAA
TTGCTCGTATAATTGACATT

Downstream 100 bases:

>100_bases
TGCGTATTTTAGCGCCAGCCGAAGCCTTGGCTTTGCTCGATGAACTGTCGGTGCTCCGCATTGCGGGTTTTGATCAAGCG
CGATCTGCCAGCTATGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MQQQTEQLSDGQRLNAAQIWAFLAKAAVGRLATHDHAHNQSNLTPLFFVCEAPHIYFATQPGHKLNLLRRYPQGVGLQAD
AFDPESSTSVFVWGRYRDVPLGAEYAHATRLLAFKYGTGFWQQILDQATKALKAGPRAVITTISQATTGCIQIERIGGRR
WEHGL

Sequences:

>Translated_165_residues
MQQQTEQLSDGQRLNAAQIWAFLAKAAVGRLATHDHAHNQSNLTPLFFVCEAPHIYFATQPGHKLNLLRRYPQGVGLQAD
AFDPESSTSVFVWGRYRDVPLGAEYAHATRLLAFKYGTGFWQQILDQATKALKAGPRAVITTISQATTGCIQIERIGGRR
WEHGL
>Mature_165_residues
MQQQTEQLSDGQRLNAAQIWAFLAKAAVGRLATHDHAHNQSNLTPLFFVCEAPHIYFATQPGHKLNLLRRYPQGVGLQAD
AFDPESSTSVFVWGRYRDVPLGAEYAHATRLLAFKYGTGFWQQILDQATKALKAGPRAVITTISQATTGCIQIERIGGRR
WEHGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18373; Mature: 18373

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQQTEQLSDGQRLNAAQIWAFLAKAAVGRLATHDHAHNQSNLTPLFFVCEAPHIYFATQ
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEC
PGHKLNLLRRYPQGVGLQADAFDPESSTSVFVWGRYRDVPLGAEYAHATRLLAFKYGTGF
CCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEECCCCCCHHHHHHHHEEEECCCCH
WQQILDQATKALKAGPRAVITTISQATTGCIQIERIGGRRWEHGL
HHHHHHHHHHHHHCCCHHEEHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MQQQTEQLSDGQRLNAAQIWAFLAKAAVGRLATHDHAHNQSNLTPLFFVCEAPHIYFATQ
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEC
PGHKLNLLRRYPQGVGLQADAFDPESSTSVFVWGRYRDVPLGAEYAHATRLLAFKYGTGF
CCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEECCCCCCHHHHHHHHEEEECCCCH
WQQILDQATKALKAGPRAVITTISQATTGCIQIERIGGRRWEHGL
HHHHHHHHHHHHHCCCHHEEHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA