| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900390
Identifier: 159900390
GI number: 159900390
Start: 4867574
End: 4867981
Strand: Reverse
Name: 159900390
Synonym: Haur_3875
Alternate gene names: NA
Gene position: 4867981-4867574 (Counterclockwise)
Preceding gene: 159900391
Following gene: 159900389
Centisome position: 76.7
GC content: 57.84
Gene sequence:
>408_bases ATGATGCGTATTTTAGCGCCAGCCGAAGCCTTGGCTTTGCTCGATGAACTGTCGGTGCTCCGCATTGCGGGTTTTGATCA AGCGCGATCTGCCAGCTATGCCGTGCCCTTGGCCTTTGTGCGGCGCGATCAATGCCTGTTGATTGCGATTCGCGCCACGG GCCGCTTGGCCCAGCTATTGCAACAGCAACCCCAAGGCTGGTGCATCGAAGCCGATCAGATTAACCCTGATTGGACGTTT CGCTCAGTTGTTGCCCAAGCCAGCGCTCAGCCTTTGGCCGACCCGCACATTGCGCTGGTGGCGCTAGCTGAGCGCTATGG CCGCAATTGGCCGCAATGGCGACCGAATGCCCCAATTCAAGCCTTTTCATTGGAACTAGCGGCGATCCAAGGCCGCCACA AATCCTAA
Upstream 100 bases:
>100_bases TGAAGGCTGGGCCTCGCGCGGTAATCACGACAATCAGCCAAGCCACCACTGGTTGTATTCAAATCGAACGGATCGGCGGG CGACGCTGGGAGCATGGCCT
Downstream 100 bases:
>100_bases GGAGCGCCGATGATCACCGTTACCCGCGAACGTCAACTCCGCCGCCCAATCAGCGAACTCTGGCAACTGTTGGCCAATCC GCATAATTTGCCGCGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MMRILAPAEALALLDELSVLRIAGFDQARSASYAVPLAFVRRDQCLLIAIRATGRLAQLLQQQPQGWCIEADQINPDWTF RSVVAQASAQPLADPHIALVALAERYGRNWPQWRPNAPIQAFSLELAAIQGRHKS
Sequences:
>Translated_135_residues MMRILAPAEALALLDELSVLRIAGFDQARSASYAVPLAFVRRDQCLLIAIRATGRLAQLLQQQPQGWCIEADQINPDWTF RSVVAQASAQPLADPHIALVALAERYGRNWPQWRPNAPIQAFSLELAAIQGRHKS >Mature_135_residues MMRILAPAEALALLDELSVLRIAGFDQARSASYAVPLAFVRRDQCLLIAIRATGRLAQLLQQQPQGWCIEADQINPDWTF RSVVAQASAQPLADPHIALVALAERYGRNWPQWRPNAPIQAFSLELAAIQGRHKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14981; Mature: 14981
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRILAPAEALALLDELSVLRIAGFDQARSASYAVPLAFVRRDQCLLIAIRATGRLAQLL CCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHH QQQPQGWCIEADQINPDWTFRSVVAQASAQPLADPHIALVALAERYGRNWPQWRPNAPIQ HHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH AFSLELAAIQGRHKS HHHHHHHEECCCCCC >Mature Secondary Structure MMRILAPAEALALLDELSVLRIAGFDQARSASYAVPLAFVRRDQCLLIAIRATGRLAQLL CCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHH QQQPQGWCIEADQINPDWTFRSVVAQASAQPLADPHIALVALAERYGRNWPQWRPNAPIQ HHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH AFSLELAAIQGRHKS HHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA