Click here to switch to the map view.

The map label for this gene is 159900373

Identifier: 159900373

GI number: 159900373

Start: 4847146

End: 4847922

Strand: Reverse

Name: 159900373

Synonym: Haur_3858

Alternate gene names: NA

Gene position: 4847922-4847146 (Counterclockwise)

Preceding gene: 159900374

Following gene: 159900370

Centisome position: 76.39

GC content: 57.79

Gene sequence:

>777_bases
ATGTTTAAATTCCGATCGATTTCAAGCAAGCGATTAACGCTATTCGCAAGCAGTCTAGGATTATTGTTAATCGCAGGTTG
TAGCCAAACAACCCAACAAACGCAGAATTCCAGCAACTATCCAGGACCACAAGCTACGGCAACTGCTTTGATCGCTTCAA
CTACCCGCACGCCGCGCCCAGAACCAACCAAAACTAAAACTGCCACTGCGGTAGCCACGCCTACGCGTCCAGCCACCTAT
CCTCAGCCGACTAAAACGCTGGTAGCAGTTGCGACCCGTACCCCACGGCCTGAACCAACCAACATCGCCTCACCCGTGCC
AGCAACTCCAAGCCAAACCTTGGTTGCGACCCGCACGCCCCGACCTGAACCAACATTAACGCCACGCCCAGCGCCAACCG
CAACCAACATTCCACCAGTCAATCCCTATCCGCAGCCAACCACTGGCAGCCAACCAACGCTTGTCATTCAACCAACGGCT
GGCGTTCAGCCTACAACTGGAACGCAACCAGAACCAACTCAGACCCCACGATCAGAACCAACGGCCAATCCGTATCCGCA
GCCCCAACCAACGCGCACGCCTCGGCCCGAACCGACGGCCAATCCGTATCCACAGCCTCAACCAACGCGCACACCCCGAC
CCGAACCGACGGCCAATCCGTATCCACAGCCACAGCCAACGCGCACGCCTCGGCCCGAACCGACGGCCAATCCGTATCCA
CAGCCACAGCCAACGCGCACGCCCCGACCCGAACCAACCCAACATCCCTATCCATAA

Upstream 100 bases:

>100_bases
GCCAAGAATATAGGACTAAAGAACTGTAAAATTCACATATCGATTGATTGAATACTTCGTTTCTCTCAATAGCAATACTA
TTTTGGTGAAGGAGTATTCA

Downstream 100 bases:

>100_bases
GCTAAAATGAAGCAGAGGCGATCGAATTCGATCGCCTCTGCTTCTCTTTTTGATACGTGCAATCTAGAGTTGTTCGAGCA
CTGCGCTCTCTTGACCAAGC

Product: rhs element Vgr protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MFKFRSISSKRLTLFASSLGLLLIAGCSQTTQQTQNSSNYPGPQATATALIASTTRTPRPEPTKTKTATAVATPTRPATY
PQPTKTLVAVATRTPRPEPTNIASPVPATPSQTLVATRTPRPEPTLTPRPAPTATNIPPVNPYPQPTTGSQPTLVIQPTA
GVQPTTGTQPEPTQTPRSEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYP
QPQPTRTPRPEPTQHPYP

Sequences:

>Translated_258_residues
MFKFRSISSKRLTLFASSLGLLLIAGCSQTTQQTQNSSNYPGPQATATALIASTTRTPRPEPTKTKTATAVATPTRPATY
PQPTKTLVAVATRTPRPEPTNIASPVPATPSQTLVATRTPRPEPTLTPRPAPTATNIPPVNPYPQPTTGSQPTLVIQPTA
GVQPTTGTQPEPTQTPRSEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYP
QPQPTRTPRPEPTQHPYP
>Mature_258_residues
MFKFRSISSKRLTLFASSLGLLLIAGCSQTTQQTQNSSNYPGPQATATALIASTTRTPRPEPTKTKTATAVATPTRPATY
PQPTKTLVAVATRTPRPEPTNIASPVPATPSQTLVATRTPRPEPTLTPRPAPTATNIPPVNPYPQPTTGSQPTLVIQPTA
GVQPTTGTQPEPTQTPRSEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYP
QPQPTRTPRPEPTQHPYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27782; Mature: 27782

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFRSISSKRLTLFASSLGLLLIAGCSQTTQQTQNSSNYPGPQATATALIASTTRTPRP
CCCCCCCCCCEEEEHHHHCCEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
EPTKTKTATAVATPTRPATYPQPTKTLVAVATRTPRPEPTNIASPVPATPSQTLVATRTP
CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC
RPEPTLTPRPAPTATNIPPVNPYPQPTTGSQPTLVIQPTAGVQPTTGTQPEPTQTPRSEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
TANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPQPTRTPRPEPTQHPYP
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFKFRSISSKRLTLFASSLGLLLIAGCSQTTQQTQNSSNYPGPQATATALIASTTRTPRP
CCCCCCCCCCEEEEHHHHCCEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
EPTKTKTATAVATPTRPATYPQPTKTLVAVATRTPRPEPTNIASPVPATPSQTLVATRTP
CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC
RPEPTLTPRPAPTATNIPPVNPYPQPTTGSQPTLVIQPTAGVQPTTGTQPEPTQTPRSEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
TANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYPQPQPTRTPRPEPTANPYP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPQPTRTPRPEPTQHPYP
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA