| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900370
Identifier: 159900370
GI number: 159900370
Start: 4839330
End: 4840334
Strand: Reverse
Name: 159900370
Synonym: Haur_3855
Alternate gene names: NA
Gene position: 4840334-4839330 (Counterclockwise)
Preceding gene: 159900373
Following gene: 159900369
Centisome position: 76.27
GC content: 51.34
Gene sequence:
>1005_bases ATGCAGCAAGCCCTTGCCCCCGACCCTGCCACGATTCGTCAACATCTTACCCAAACCTATGCGATTCAGCCCAACCGCAT CGAGCAAATCAATCGTGGCAATGACCCACGCGCGGCGATTTACCATGTGCAAACCAACGAACAACCCTACTTTCTCAAGC TCAAGGCTGGCTCAATCTATCAGGCAGGGGTGTTATTATCGCGCTATCTCAAGGATCGGGGAGTGGCGGCGGTTGCGCCA GTCGATACCCGCACCCAGCAGCTTTGGAGCCATTGCCAACAATTTCATAGCGTGCTCTACCCCTATATCGAAGGCGCAAC AGGCATGGACCAAGGCATGTCGGCGCTGCAATGGCGGAGTTTTGGCCAACAATTGCGCCGAATTCATACGATGCAAGTGC GTGCGCCGCTACGCCAGATGCTGCAATGGGAGCAATTTCGCCCGCTCTGGTTGCCAACGGTTCAAGCAATTCACAACAGC ATCAATACTTGGCCAATTGGCGATAGCTATAGCGCCGAGTTAATTGATTTTTGGCGAGTCAAATCGGTCGAAATCAGTTA TTTGATCAAGCGAATTAGCGCATTAGGCCATGAGCTAAGGGCCAATGCTGGTGATTTTGGCCTGAGCCATGGCGATATTC ACACCGCCAACATTGTGCTCGATCAGATTCAACAGATTAATATCGTCGATTGGGATTACCCGATGTTTGCTCCCAAAGAG CGTGATTTGCGTTTTGTGGTTGGTTCTGTCATCGGTGTGCCAGTGCAGCAGCATGAAGAACAATGGTTTTTTGAGGGCTA CGGCCAACCAACGATTGACTACAAAGCCTTGGCCTACTATCGTTATGAGCGGGTGATTCAAGACCTTGGCGATTATGCCC AGCGGGTATTGTTACGCCGTGATGCCCCGCCAGCATTCAAACAAGCCGCCTTACAATCGTTGCGTTCGCGCTTTTCGACT GGCAATATCATCGAATCGGCCTATCAAGCTGATCGCACAAGTTAA
Upstream 100 bases:
>100_bases CCAACACATTAGCTCCACACTCCCCTCACCTATTTTTATGCTTGAGCTTGCTTTCCAAGGGCGTAAGGCAAGCCAGTTAT TTCGCTGAAGGAAGACTGTT
Downstream 100 bases:
>100_bases TGGAGAAGGATTGAGATGCCTACAATTGCCCCAATTTTAGCTCAAAGCCATGACTCAATTCGGTTTGTAGTCGATGCAGT TGAGCCATGCCAAAGCTCGC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Spectinomycin Phosphotransferase
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MQQALAPDPATIRQHLTQTYAIQPNRIEQINRGNDPRAAIYHVQTNEQPYFLKLKAGSIYQAGVLLSRYLKDRGVAAVAP VDTRTQQLWSHCQQFHSVLYPYIEGATGMDQGMSALQWRSFGQQLRRIHTMQVRAPLRQMLQWEQFRPLWLPTVQAIHNS INTWPIGDSYSAELIDFWRVKSVEISYLIKRISALGHELRANAGDFGLSHGDIHTANIVLDQIQQINIVDWDYPMFAPKE RDLRFVVGSVIGVPVQQHEEQWFFEGYGQPTIDYKALAYYRYERVIQDLGDYAQRVLLRRDAPPAFKQAALQSLRSRFST GNIIESAYQADRTS
Sequences:
>Translated_334_residues MQQALAPDPATIRQHLTQTYAIQPNRIEQINRGNDPRAAIYHVQTNEQPYFLKLKAGSIYQAGVLLSRYLKDRGVAAVAP VDTRTQQLWSHCQQFHSVLYPYIEGATGMDQGMSALQWRSFGQQLRRIHTMQVRAPLRQMLQWEQFRPLWLPTVQAIHNS INTWPIGDSYSAELIDFWRVKSVEISYLIKRISALGHELRANAGDFGLSHGDIHTANIVLDQIQQINIVDWDYPMFAPKE RDLRFVVGSVIGVPVQQHEEQWFFEGYGQPTIDYKALAYYRYERVIQDLGDYAQRVLLRRDAPPAFKQAALQSLRSRFST GNIIESAYQADRTS >Mature_334_residues MQQALAPDPATIRQHLTQTYAIQPNRIEQINRGNDPRAAIYHVQTNEQPYFLKLKAGSIYQAGVLLSRYLKDRGVAAVAP VDTRTQQLWSHCQQFHSVLYPYIEGATGMDQGMSALQWRSFGQQLRRIHTMQVRAPLRQMLQWEQFRPLWLPTVQAIHNS INTWPIGDSYSAELIDFWRVKSVEISYLIKRISALGHELRANAGDFGLSHGDIHTANIVLDQIQQINIVDWDYPMFAPKE RDLRFVVGSVIGVPVQQHEEQWFFEGYGQPTIDYKALAYYRYERVIQDLGDYAQRVLLRRDAPPAFKQAALQSLRSRFST GNIIESAYQADRTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38462; Mature: 38462
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQALAPDPATIRQHLTQTYAIQPNRIEQINRGNDPRAAIYHVQTNEQPYFLKLKAGSIY CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCHH QAGVLLSRYLKDRGVAAVAPVDTRTQQLWSHCQQFHSVLYPYIEGATGMDQGMSALQWRS HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FGQQLRRIHTMQVRAPLRQMLQWEQFRPLWLPTVQAIHNSINTWPIGDSYSAELIDFWRV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KSVEISYLIKRISALGHELRANAGDFGLSHGDIHTANIVLDQIQQINIVDWDYPMFAPKE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCC RDLRFVVGSVIGVPVQQHEEQWFFEGYGQPTIDYKALAYYRYERVIQDLGDYAQRVLLRR CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DAPPAFKQAALQSLRSRFSTGNIIESAYQADRTS CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQQALAPDPATIRQHLTQTYAIQPNRIEQINRGNDPRAAIYHVQTNEQPYFLKLKAGSIY CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCHH QAGVLLSRYLKDRGVAAVAPVDTRTQQLWSHCQQFHSVLYPYIEGATGMDQGMSALQWRS HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FGQQLRRIHTMQVRAPLRQMLQWEQFRPLWLPTVQAIHNSINTWPIGDSYSAELIDFWRV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KSVEISYLIKRISALGHELRANAGDFGLSHGDIHTANIVLDQIQQINIVDWDYPMFAPKE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCC RDLRFVVGSVIGVPVQQHEEQWFFEGYGQPTIDYKALAYYRYERVIQDLGDYAQRVLLRR CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DAPPAFKQAALQSLRSRFSTGNIIESAYQADRTS CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA