| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900374
Identifier: 159900374
GI number: 159900374
Start: 4848136
End: 4848684
Strand: Reverse
Name: 159900374
Synonym: Haur_3859
Alternate gene names: NA
Gene position: 4848684-4848136 (Counterclockwise)
Preceding gene: 159900375
Following gene: 159900373
Centisome position: 76.4
GC content: 58.83
Gene sequence:
>549_bases ATGTCAGCAAAACCAACCAACGAATGGCGTTTCAAAATCTTGCTTGCCAGCCTTGTAATCATTTTTATGTTTGCAGGGTT GAGCCAAGCCAGCGGCAAAACCAGCCCCTTAGACCATGGTGTCGATAATCCATACCCAATGCCAACCCGGACTCGCGTGC CGTTTGTCACTCGTACACCCCGCCCAACTCATGTGCCAATCACCCGCACACCCCGCCCAACTCGTGTGCCAATCACTCGC ACGCCCGAGGCCACTCGTACACCTTGGCCAACCCCACTTGCTACTCGCACTCCATTGGCAACGCGCACGCCCGAGGCCAC TCGTACACCTTGGCCAACCCGCACCCCTGAAGCTACCCGCTTGCCGATCACCCGCACGCCCGAAGCTACTCGTACACCTT GGCCAACCCCACTTGCTACTCGCACTCCATTGGCAACGCGCACGCCCGAAGCTACCCGCTTGCCGATCACCCGCACGCCC GAGGCAACGCGTACACCTTGGCCAACCCGCACCCCTGAAGCAACAAAAACGCCAACTCCTACACTTTAG
Upstream 100 bases:
>100_bases CTTTCCAAGAGAGAATAGGACTAATGGTCTATCAGCAAGCCATAGCGAAAAAGCACTCCTCACGTTTTACCTAGCAGAAT CGCAACAGAAGGAGCCACCC
Downstream 100 bases:
>100_bases TTAAATTATAGAGCAGCCAGATTACATATTGATCTCGCTGCTCTAGCTACAAAAATAGGACTAAAGATTAAATAAGTACT TTTAATATTTTATACGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSAKPTNEWRFKILLASLVIIFMFAGLSQASGKTSPLDHGVDNPYPMPTRTRVPFVTRTPRPTHVPITRTPRPTRVPITR TPEATRTPWPTPLATRTPLATRTPEATRTPWPTRTPEATRLPITRTPEATRTPWPTPLATRTPLATRTPEATRLPITRTP EATRTPWPTRTPEATKTPTPTL
Sequences:
>Translated_182_residues MSAKPTNEWRFKILLASLVIIFMFAGLSQASGKTSPLDHGVDNPYPMPTRTRVPFVTRTPRPTHVPITRTPRPTRVPITR TPEATRTPWPTPLATRTPLATRTPEATRTPWPTRTPEATRLPITRTPEATRTPWPTPLATRTPLATRTPEATRLPITRTP EATRTPWPTRTPEATKTPTPTL >Mature_181_residues SAKPTNEWRFKILLASLVIIFMFAGLSQASGKTSPLDHGVDNPYPMPTRTRVPFVTRTPRPTHVPITRTPRPTRVPITRT PEATRTPWPTPLATRTPLATRTPEATRTPWPTRTPEATRLPITRTPEATRTPWPTPLATRTPLATRTPEATRLPITRTPE ATRTPWPTRTPEATKTPTPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20359; Mature: 20227
Theoretical pI: Translated: 12.47; Mature: 12.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKPTNEWRFKILLASLVIIFMFAGLSQASGKTSPLDHGVDNPYPMPTRTRVPFVTRTP CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC RPTHVPITRTPRPTRVPITRTPEATRTPWPTPLATRTPLATRTPEATRTPWPTRTPEATR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPITRTPEATRTPWPTPLATRTPLATRTPEATRLPITRTPEATRTPWPTRTPEATKTPTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TL CC >Mature Secondary Structure SAKPTNEWRFKILLASLVIIFMFAGLSQASGKTSPLDHGVDNPYPMPTRTRVPFVTRTP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC RPTHVPITRTPRPTRVPITRTPEATRTPWPTPLATRTPLATRTPEATRTPWPTRTPEATR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPITRTPEATRTPWPTPLATRTPLATRTPEATRLPITRTPEATRTPWPTRTPEATKTPTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA