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The map label for this gene is afsR [H]

Identifier: 159900365

GI number: 159900365

Start: 4830315

End: 4832750

Strand: Reverse

Name: afsR [H]

Synonym: Haur_3848

Alternate gene names: 159900365

Gene position: 4832750-4830315 (Counterclockwise)

Preceding gene: 159900366

Following gene: 159900364

Centisome position: 76.15

GC content: 47.0

Gene sequence:

>2436_bases
ATGACAATGTGGAATGAACGCACCGTGCAAGATGTGTTACAACGCCCAGAACGCTTGCTTAGCCAAACTGATTGGCGGCA
CATAATTCAGCAACAGGGTGGATTAACTGCGTTTTACCAACAATTGCAACAACTGCCACTTGAAGCCAATCAACAAGCGG
TGCTGAACGTTTTGACGACCTATCCAGGTGCGCCAGTTGAAACCTATTGTTCATTGCTGAATGTGCACAAAGCGACCTAT
CATCGCTATCAAAAAGCCTTGATTCAACAACTAACCAGCTTGCTCAATAACGAGCAACCGCAAGCACACACGCCAACCCA
AGCGCCGTCGTTGCACCAACTGCGCCCGATTTTGGCCGATTTTGTGGGCCGTACAGCCGAACTCAAACAAGCTCACTATG
CGATCGATATCGCCCACAATGCCGCACAGGGTGCGGTAATTAACGGAATTCAAGGCATGGGCGGGGTTGGAAAAACTGAG
CTAGCAATCTATTTGGCGCATCAGTTGATTCCGCATTTTCCTGATGCCCAAATTGTGCTCAATTTGTATGGCTCGCGCGA
GCAACCGCTGACGATTGAGCAAGCACTGGGCACGGTGATTGCCCTGTTTAAGCCGAATGCCAAATTGCCTGAACAACGCG
AAAAACTGCTTGAAATCTATCATGAGGTGTTGGCTGATAAGCGGGTATTGATTTTGGCCGACGATGCGCGAGATTTGGCC
CATGTCCAAGATTTAACCCCGCCAGTTGGTAGTTGTTTGTTGGTCACTAGCCGCTTGCGGTTTGCGATGCCGCTGATGGC
GCAACTGCATCTGACCGAGTTTCAGGAGCCTGAGGCCATCGCTTTGCTCCAGCAAATTTGCCCACGACTTGAGGCTGAAA
CTGCCCAGCAATTGGCCGTTGCCTGTGGTTATCTACCCTTAGCTTTGCGCATCAGTGCCAGTATTTTGGCCCAAAACCCT
GAGTTAGCGGTTGCCGAATATCTGATCCAACTGCGCGATCAACAGCAACAACTCGCCGCCTTGGAATACCCCGATGATCC
GCAGGCCAGCGTGGCAGCATCGTTGGCCTTGAGTTACGCCCGTTTGCCCAGCGAATTGCAAGCCTTGGCGCGTCAACTCA
GCCTGATTGTGGCCGACTTTAGTAGTGCCATGGGTTTAGCAACAGCAGGGCTGGATTTCAACATGGCCAACGAAAATTTG
CTGTATAAATTGGCCTTGCACAACTTGATTCAATTTGAGCATCGCCAAGAGCGCTGGCGCATGCACGACCTCGTTCGCAG
CGTGCTACGCCGTTATTTGGACGAAGCAGAACAAACTCAAACTCTATTGAATTATGCCCAAGCCAGTGTTGAAACTCTCA
AAATTATTTATCAGGATTTTCGAGCAGGCGGAGCTACTCAAACTAAAAGCATTGATAATTTTGATCGCGAATATGCTCAT
ATTGTAGCAATTTGGCAATGGGCGCAACAACAACCGATCTCGCCAGTAATAGATAAAATCGTGGTTGAATTAGGATTTTC
CAGTGGTGGAGTTAGTCGGATACGAGTTGGTCGTCGCTATAGCACTTTAGCCGAACATGAGTTTGGGTTTGAGGCAGCTC
TGCGTATTCAAGAGCTTTATAAAGCAGCAATATTTGCTGGAGCACTTGCTAATAGATATCTCGCTCGTGCAGAGTATAAA
ATATCACTCGGGTGGCATGAACGAGCTTATGCGCTTGCTCTTGAGATCAACGATCTTTATTTACAATCGTTATTTTTAGG
TGATATGGCCACATGTTATAGCCAAATGGGTGGTGATAAACATCTGGATAAAGCCCTGGACTTAGAGCGCGAGGCACTAC
GATTGTTTAGGTTAAGCGGGTATGAGGGTTCAGGTGAAAGCCTCAGAGTGAATAATCTCGCAACAAACCTTGCATTGCTT
GGATACCATGAAGAAGCTGCTGAATATTTTATTGAAGCTGTTACTATCGCTCAAAAATCTGAGAACCAAGCTGATGAGTG
TCGTGCACTCTATAATCTCGGTGAAACGTATCTCAAATTGAACCAACTTGACCAAGCCCAAATAGCTTTTGATCAAGCAC
TTACTATTGTTGAGCGCATGAATTTTGATGAAGGCCGCGCTTACATGTTGCAAGGCCAAGCAAATGTAGCGATGTTGCAA
AAAAACTATCACCAAGCAATCCAAAGATTCAATCAAGCATATGCACTCATGCAGCATTATAATCGGACTATTGCGTTAAA
CATTCAATGGAAAATCGGCCTCCTGTATTGGAAGCTTAGTGATGTGTTAGCAGCTGAAGCCCAAATGCAAGCAGTGCTTG
AACAAGAACGCCCATTGGGGATTGATCGGGTGCAAGATCATGAACTACAACTGAGCAATTTGCGCAATCGCCAACCCTTT
GATGATAGCCTGTTGGTATCGATGCTCAAAGAATAG

Upstream 100 bases:

>100_bases
CCAAGAGCTTAATCGTTGGTGGTTGGGTTAGTGGCCTAAGTTTAGCCCTGATTTTGCTTGGCCTAGCTTTGAGCTGGTAT
AAAACGAGAAAGGCTGCATA

Downstream 100 bases:

>100_bases
CAATATGCCGAAAATCACATAGGTTCTATGCAATTCTAGCAATAGGCTGTTGGGGAATCGGCTGAGATTTGGTACAATAG
CGAGGCAACTATTTTGGCAC

Product: NB-ARC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 811; Mature: 810

Protein sequence:

>811_residues
MTMWNERTVQDVLQRPERLLSQTDWRHIIQQQGGLTAFYQQLQQLPLEANQQAVLNVLTTYPGAPVETYCSLLNVHKATY
HRYQKALIQQLTSLLNNEQPQAHTPTQAPSLHQLRPILADFVGRTAELKQAHYAIDIAHNAAQGAVINGIQGMGGVGKTE
LAIYLAHQLIPHFPDAQIVLNLYGSREQPLTIEQALGTVIALFKPNAKLPEQREKLLEIYHEVLADKRVLILADDARDLA
HVQDLTPPVGSCLLVTSRLRFAMPLMAQLHLTEFQEPEAIALLQQICPRLEAETAQQLAVACGYLPLALRISASILAQNP
ELAVAEYLIQLRDQQQQLAALEYPDDPQASVAASLALSYARLPSELQALARQLSLIVADFSSAMGLATAGLDFNMANENL
LYKLALHNLIQFEHRQERWRMHDLVRSVLRRYLDEAEQTQTLLNYAQASVETLKIIYQDFRAGGATQTKSIDNFDREYAH
IVAIWQWAQQQPISPVIDKIVVELGFSSGGVSRIRVGRRYSTLAEHEFGFEAALRIQELYKAAIFAGALANRYLARAEYK
ISLGWHERAYALALEINDLYLQSLFLGDMATCYSQMGGDKHLDKALDLEREALRLFRLSGYEGSGESLRVNNLATNLALL
GYHEEAAEYFIEAVTIAQKSENQADECRALYNLGETYLKLNQLDQAQIAFDQALTIVERMNFDEGRAYMLQGQANVAMLQ
KNYHQAIQRFNQAYALMQHYNRTIALNIQWKIGLLYWKLSDVLAAEAQMQAVLEQERPLGIDRVQDHELQLSNLRNRQPF
DDSLLVSMLKE

Sequences:

>Translated_811_residues
MTMWNERTVQDVLQRPERLLSQTDWRHIIQQQGGLTAFYQQLQQLPLEANQQAVLNVLTTYPGAPVETYCSLLNVHKATY
HRYQKALIQQLTSLLNNEQPQAHTPTQAPSLHQLRPILADFVGRTAELKQAHYAIDIAHNAAQGAVINGIQGMGGVGKTE
LAIYLAHQLIPHFPDAQIVLNLYGSREQPLTIEQALGTVIALFKPNAKLPEQREKLLEIYHEVLADKRVLILADDARDLA
HVQDLTPPVGSCLLVTSRLRFAMPLMAQLHLTEFQEPEAIALLQQICPRLEAETAQQLAVACGYLPLALRISASILAQNP
ELAVAEYLIQLRDQQQQLAALEYPDDPQASVAASLALSYARLPSELQALARQLSLIVADFSSAMGLATAGLDFNMANENL
LYKLALHNLIQFEHRQERWRMHDLVRSVLRRYLDEAEQTQTLLNYAQASVETLKIIYQDFRAGGATQTKSIDNFDREYAH
IVAIWQWAQQQPISPVIDKIVVELGFSSGGVSRIRVGRRYSTLAEHEFGFEAALRIQELYKAAIFAGALANRYLARAEYK
ISLGWHERAYALALEINDLYLQSLFLGDMATCYSQMGGDKHLDKALDLEREALRLFRLSGYEGSGESLRVNNLATNLALL
GYHEEAAEYFIEAVTIAQKSENQADECRALYNLGETYLKLNQLDQAQIAFDQALTIVERMNFDEGRAYMLQGQANVAMLQ
KNYHQAIQRFNQAYALMQHYNRTIALNIQWKIGLLYWKLSDVLAAEAQMQAVLEQERPLGIDRVQDHELQLSNLRNRQPF
DDSLLVSMLKE
>Mature_810_residues
TMWNERTVQDVLQRPERLLSQTDWRHIIQQQGGLTAFYQQLQQLPLEANQQAVLNVLTTYPGAPVETYCSLLNVHKATYH
RYQKALIQQLTSLLNNEQPQAHTPTQAPSLHQLRPILADFVGRTAELKQAHYAIDIAHNAAQGAVINGIQGMGGVGKTEL
AIYLAHQLIPHFPDAQIVLNLYGSREQPLTIEQALGTVIALFKPNAKLPEQREKLLEIYHEVLADKRVLILADDARDLAH
VQDLTPPVGSCLLVTSRLRFAMPLMAQLHLTEFQEPEAIALLQQICPRLEAETAQQLAVACGYLPLALRISASILAQNPE
LAVAEYLIQLRDQQQQLAALEYPDDPQASVAASLALSYARLPSELQALARQLSLIVADFSSAMGLATAGLDFNMANENLL
YKLALHNLIQFEHRQERWRMHDLVRSVLRRYLDEAEQTQTLLNYAQASVETLKIIYQDFRAGGATQTKSIDNFDREYAHI
VAIWQWAQQQPISPVIDKIVVELGFSSGGVSRIRVGRRYSTLAEHEFGFEAALRIQELYKAAIFAGALANRYLARAEYKI
SLGWHERAYALALEINDLYLQSLFLGDMATCYSQMGGDKHLDKALDLEREALRLFRLSGYEGSGESLRVNNLATNLALLG
YHEEAAEYFIEAVTIAQKSENQADECRALYNLGETYLKLNQLDQAQIAFDQALTIVERMNFDEGRAYMLQGQANVAMLQK
NYHQAIQRFNQAYALMQHYNRTIALNIQWKIGLLYWKLSDVLAAEAQMQAVLEQERPLGIDRVQDHELQLSNLRNRQPFD
DSLLVSMLKE

Specific function: Global regulatory protein for secondary metabolite formation [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR000767
- InterPro:   IPR002182
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00931 NB-ARC; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 91602; Mature: 91471

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMWNERTVQDVLQRPERLLSQTDWRHIIQQQGGLTAFYQQLQQLPLEANQQAVLNVLTT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHC
YPGAPVETYCSLLNVHKATYHRYQKALIQQLTSLLNNEQPQAHTPTQAPSLHQLRPILAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
FVGRTAELKQAHYAIDIAHNAAQGAVINGIQGMGGVGKTELAIYLAHQLIPHFPDAQIVL
HHCCHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEE
NLYGSREQPLTIEQALGTVIALFKPNAKLPEQREKLLEIYHEVLADKRVLILADDARDLA
EECCCCCCCEEHHHHHHHEEHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
HVQDLTPPVGSCLLVTSRLRFAMPLMAQLHLTEFQEPEAIALLQQICPRLEAETAQQLAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ACGYLPLALRISASILAQNPELAVAEYLIQLRDQQQQLAALEYPDDPQASVAASLALSYA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RLPSELQALARQLSLIVADFSSAMGLATAGLDFNMANENLLYKLALHNLIQFEHRQERWR
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MHDLVRSVLRRYLDEAEQTQTLLNYAQASVETLKIIYQDFRAGGATQTKSIDNFDREYAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IVAIWQWAQQQPISPVIDKIVVELGFSSGGVSRIRVGRRYSTLAEHEFGFEAALRIQELY
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH
KAAIFAGALANRYLARAEYKISLGWHERAYALALEINDLYLQSLFLGDMATCYSQMGGDK
HHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCH
HLDKALDLEREALRLFRLSGYEGSGESLRVNNLATNLALLGYHEEAAEYFIEAVTIAQKS
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
ENQADECRALYNLGETYLKLNQLDQAQIAFDQALTIVERMNFDEGRAYMLQGQANVAMLQ
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH
KNYHQAIQRFNQAYALMQHYNRTIALNIQWKIGLLYWKLSDVLAAEAQMQAVLEQERPLG
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
IDRVQDHELQLSNLRNRQPFDDSLLVSMLKE
CCCCCCHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TMWNERTVQDVLQRPERLLSQTDWRHIIQQQGGLTAFYQQLQQLPLEANQQAVLNVLTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHC
YPGAPVETYCSLLNVHKATYHRYQKALIQQLTSLLNNEQPQAHTPTQAPSLHQLRPILAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
FVGRTAELKQAHYAIDIAHNAAQGAVINGIQGMGGVGKTELAIYLAHQLIPHFPDAQIVL
HHCCHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEE
NLYGSREQPLTIEQALGTVIALFKPNAKLPEQREKLLEIYHEVLADKRVLILADDARDLA
EECCCCCCCEEHHHHHHHEEHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
HVQDLTPPVGSCLLVTSRLRFAMPLMAQLHLTEFQEPEAIALLQQICPRLEAETAQQLAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ACGYLPLALRISASILAQNPELAVAEYLIQLRDQQQQLAALEYPDDPQASVAASLALSYA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RLPSELQALARQLSLIVADFSSAMGLATAGLDFNMANENLLYKLALHNLIQFEHRQERWR
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MHDLVRSVLRRYLDEAEQTQTLLNYAQASVETLKIIYQDFRAGGATQTKSIDNFDREYAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IVAIWQWAQQQPISPVIDKIVVELGFSSGGVSRIRVGRRYSTLAEHEFGFEAALRIQELY
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH
KAAIFAGALANRYLARAEYKISLGWHERAYALALEINDLYLQSLFLGDMATCYSQMGGDK
HHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCH
HLDKALDLEREALRLFRLSGYEGSGESLRVNNLATNLALLGYHEEAAEYFIEAVTIAQKS
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
ENQADECRALYNLGETYLKLNQLDQAQIAFDQALTIVERMNFDEGRAYMLQGQANVAMLQ
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH
KNYHQAIQRFNQAYALMQHYNRTIALNIQWKIGLLYWKLSDVLAAEAQMQAVLEQERPLG
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
IDRVQDHELQLSNLRNRQPFDDSLLVSMLKE
CCCCCCHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2253887; 12000953; 2428809 [H]