| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900366
Identifier: 159900366
GI number: 159900366
Start: 4832750
End: 4835197
Strand: Reverse
Name: 159900366
Synonym: Haur_3849
Alternate gene names: NA
Gene position: 4835197-4832750 (Counterclockwise)
Preceding gene: 159900367
Following gene: 159900365
Centisome position: 76.19
GC content: 52.94
Gene sequence:
>2448_bases ATGAGCGCCATGCAACCAAGCCTATTTTTGCGCCAGTGGCAACGCTGGTGGCCGTATCTCAGCATTACCTTTGTCGCCCT GCTTTTGCTGTGGCGGGTGGTGCTGGGCAACATTTTCTTGCCGCTGGATATCGTGGCCCACCTGCATCCTTGGCGCTTTT CCTACGAACGGGTGGCGGTCAATAATCCAATCAATAGCGATCTGGTTACCCAAATTTACCCGCGCCGCTTGGTAACCAAC CAGATTCTTGAGCAAGGCGCGTTGCCCCTATGGAACCCGACGATTTTAACTGGCACGCCGTTGTTGGCCGATGGTCAGTT GGCCTTTTTCTACCCTTTGAGTTGGCTGTTTGTGCTGCTGCCAGTTGGCTATGCCTTTGGGATTTATACGCTGTTGAATG TGTGGTTGGCGGGGATTGGCACGTTTAAATTTGCTCAACGCATGCAACTTGAGCCAATGCCAGCAACGCTCGCTGCCGTG GGCTATATGCTCAGTGGCTTTTTACTCAATTGGCTGCATTTTCCCGAGTTTAGTGCGGCTTGTGCCATGCTGCCGTGGTG TTTTTGGGCGGTGCTGCGGGCCTGCCAAAGCCAACGTTGGCACGATTGGCTGCTCGCCAGTTTGGTGCTGGCCTTGCCGT TGGTCAGCCAAATTCAACTAGCCTTCTATGTGTATGTCGGGGTTGGCTGTTTGCTGCTGGCTCAACTGTTGGCGTTGCCA ACTTGGCGCTTACGCTTCCAACAAATCGGCCAATTTAGCAGTGCAATTGGCTTGGCGCTCGGATTGAGTGCGGTGCAGTT GTTGCCACAAATTGCCCTTTCGGCTCAGGGCCAACGCCTTGATATTGGCTCAGGGCTTGGCTCGGCCAGTTCAATCATGG TGTGGCTGCTGCGCTTGGCGTTGCCGATTGTTGATGGAGCCGCCCGCGAAACTGCTAGCGCATGGCAACCACATTTGTTG CAGGGCATTCAACCCTATGCAGGCATCGTAAGTTTGGCCTTGGCAGGCTTGGCGATTTGGCGCAGCAAACAGCCTGGCGT GAGGCTGTTTGCCTGCTTGGCGCTTGGCTCGTTTGCGGTGGCGATTGGCACACCGTTGCTCCAATTGCTGCTTTGGTTGG TTCCGCCCTATCGCCAATTTGCTGATCATCAGCGGTGGTTTAGCCTGTGGGGTTTTGCGATAGCCCTGTTGGCAGGCTTT GGCTTACAACGTTTGCAGCAACCGAGCAACAAGCCAAATCGGGCGCTCTGGGTGCAACGCGGCCTCTTGCTGCTTGGATT AATTGGTGTGGCTGGCTGGGCTTTGCAACATATCGCCTTATTCACTGTCGATTCGCGTTATGCCCAATATAGCACCATGC TGCGTTTGGCACTCAACCCAACCAGCCTTGCTATTCTGGGCTTGAGTGGTTTGGCATTGGTAGGGTTGTTGATCAAACGC ATTCCACGGCGTTGGAGCAATCTTGCTGTTTTGTTGATTCTGCTGGGCGATTTGCTTTGGTATGGTGGCAGCTACAACAC CAGCATTGATCCTGCAATCTTCCAGCCAACCGCTGATCAGCAAGCCAGTTTGGCTGCCGAGCCAGCCTTGCAAGATCCGG CGATTCTGTATCCGCCAACTCGCCAGATCAATTTTCTGCTGAGCCAACCCGGGGTGTTTCGCGTGTTTGGAGCCGATTAT CAAGCCATGCCGACGAATGTGTTTAGTGCTTTTGGACTTGAGGATATTCGCGGCTATCAATCGCTCTATTTAGCCCAATA CAATCGGCTAACGCGCCTAATGGATGGCAAGGATTATCATAAACTTGGCGAGGGTGGCAACAGCCTACACGCGTATTTCA CCATGGCCTACAACCAGCGGCGTTTGCTGAATATGCTGAATGTGGAATATCTGATTTTTACGCCTAATAGCCCCAACCCT GAGTTGTATCAACCCTTAGAATTGGTGCAACGTAACGATGAAGGCACGATTTATCGCAATCCTGAGGTGTTGCCACGCGC CTGGATGGTCTATCAAACCGAGGTAATTAGCGACGAATTAGCCCAACTTGATCGGCTGGCAGCTAACGATTTTGACCCAG CCAAGCAAGCAATTGTGGCCGAGCCAATTCCGGCGCTTGGCCAAGCACCGAGCCAAACGCTGACTCCTACGGTGAGCTAT GAGCCAAATCGGGCGCTGGTGCAGGTCGAAACTTCAGCGGCAGGTTTGTTGGTTTTGGCTGATGCCTACACCAACGATTG GCAAGTAAGCGTTGACGGCCAAACAGCTCAACTCTATCGCACCAATTATGCTTTGCGCGGCGTATGGGTTGATGCAGGCC AACACACAGTCGAATTCAGCTATCGACCCAAGAGCTTAATCGTTGGTGGTTGGGTTAGTGGCCTAAGTTTAGCCCTGATT TTGCTTGGCCTAGCTTTGAGCTGGTATAAAACGAGAAAGGCTGCATAA
Upstream 100 bases:
>100_bases GTTCAAACGTCGAACACCGCGCCTAGCCAGCTAATCGCGTATAATTGAGCATCAGATCGTTGCCCATGGGTTGAGCCTCA GCCCATGGGTTTTTAATGGA
Downstream 100 bases:
>100_bases TGACAATGTGGAATGAACGCACCGTGCAAGATGTGTTACAACGCCCAGAACGCTTGCTTAGCCAAACTGATTGGCGGCAC ATAATTCAGCAACAGGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MSAMQPSLFLRQWQRWWPYLSITFVALLLLWRVVLGNIFLPLDIVAHLHPWRFSYERVAVNNPINSDLVTQIYPRRLVTN QILEQGALPLWNPTILTGTPLLADGQLAFFYPLSWLFVLLPVGYAFGIYTLLNVWLAGIGTFKFAQRMQLEPMPATLAAV GYMLSGFLLNWLHFPEFSAACAMLPWCFWAVLRACQSQRWHDWLLASLVLALPLVSQIQLAFYVYVGVGCLLLAQLLALP TWRLRFQQIGQFSSAIGLALGLSAVQLLPQIALSAQGQRLDIGSGLGSASSIMVWLLRLALPIVDGAARETASAWQPHLL QGIQPYAGIVSLALAGLAIWRSKQPGVRLFACLALGSFAVAIGTPLLQLLLWLVPPYRQFADHQRWFSLWGFAIALLAGF GLQRLQQPSNKPNRALWVQRGLLLLGLIGVAGWALQHIALFTVDSRYAQYSTMLRLALNPTSLAILGLSGLALVGLLIKR IPRRWSNLAVLLILLGDLLWYGGSYNTSIDPAIFQPTADQQASLAAEPALQDPAILYPPTRQINFLLSQPGVFRVFGADY QAMPTNVFSAFGLEDIRGYQSLYLAQYNRLTRLMDGKDYHKLGEGGNSLHAYFTMAYNQRRLLNMLNVEYLIFTPNSPNP ELYQPLELVQRNDEGTIYRNPEVLPRAWMVYQTEVISDELAQLDRLAANDFDPAKQAIVAEPIPALGQAPSQTLTPTVSY EPNRALVQVETSAAGLLVLADAYTNDWQVSVDGQTAQLYRTNYALRGVWVDAGQHTVEFSYRPKSLIVGGWVSGLSLALI LLGLALSWYKTRKAA
Sequences:
>Translated_815_residues MSAMQPSLFLRQWQRWWPYLSITFVALLLLWRVVLGNIFLPLDIVAHLHPWRFSYERVAVNNPINSDLVTQIYPRRLVTN QILEQGALPLWNPTILTGTPLLADGQLAFFYPLSWLFVLLPVGYAFGIYTLLNVWLAGIGTFKFAQRMQLEPMPATLAAV GYMLSGFLLNWLHFPEFSAACAMLPWCFWAVLRACQSQRWHDWLLASLVLALPLVSQIQLAFYVYVGVGCLLLAQLLALP TWRLRFQQIGQFSSAIGLALGLSAVQLLPQIALSAQGQRLDIGSGLGSASSIMVWLLRLALPIVDGAARETASAWQPHLL QGIQPYAGIVSLALAGLAIWRSKQPGVRLFACLALGSFAVAIGTPLLQLLLWLVPPYRQFADHQRWFSLWGFAIALLAGF GLQRLQQPSNKPNRALWVQRGLLLLGLIGVAGWALQHIALFTVDSRYAQYSTMLRLALNPTSLAILGLSGLALVGLLIKR IPRRWSNLAVLLILLGDLLWYGGSYNTSIDPAIFQPTADQQASLAAEPALQDPAILYPPTRQINFLLSQPGVFRVFGADY QAMPTNVFSAFGLEDIRGYQSLYLAQYNRLTRLMDGKDYHKLGEGGNSLHAYFTMAYNQRRLLNMLNVEYLIFTPNSPNP ELYQPLELVQRNDEGTIYRNPEVLPRAWMVYQTEVISDELAQLDRLAANDFDPAKQAIVAEPIPALGQAPSQTLTPTVSY EPNRALVQVETSAAGLLVLADAYTNDWQVSVDGQTAQLYRTNYALRGVWVDAGQHTVEFSYRPKSLIVGGWVSGLSLALI LLGLALSWYKTRKAA >Mature_814_residues SAMQPSLFLRQWQRWWPYLSITFVALLLLWRVVLGNIFLPLDIVAHLHPWRFSYERVAVNNPINSDLVTQIYPRRLVTNQ ILEQGALPLWNPTILTGTPLLADGQLAFFYPLSWLFVLLPVGYAFGIYTLLNVWLAGIGTFKFAQRMQLEPMPATLAAVG YMLSGFLLNWLHFPEFSAACAMLPWCFWAVLRACQSQRWHDWLLASLVLALPLVSQIQLAFYVYVGVGCLLLAQLLALPT WRLRFQQIGQFSSAIGLALGLSAVQLLPQIALSAQGQRLDIGSGLGSASSIMVWLLRLALPIVDGAARETASAWQPHLLQ GIQPYAGIVSLALAGLAIWRSKQPGVRLFACLALGSFAVAIGTPLLQLLLWLVPPYRQFADHQRWFSLWGFAIALLAGFG LQRLQQPSNKPNRALWVQRGLLLLGLIGVAGWALQHIALFTVDSRYAQYSTMLRLALNPTSLAILGLSGLALVGLLIKRI PRRWSNLAVLLILLGDLLWYGGSYNTSIDPAIFQPTADQQASLAAEPALQDPAILYPPTRQINFLLSQPGVFRVFGADYQ AMPTNVFSAFGLEDIRGYQSLYLAQYNRLTRLMDGKDYHKLGEGGNSLHAYFTMAYNQRRLLNMLNVEYLIFTPNSPNPE LYQPLELVQRNDEGTIYRNPEVLPRAWMVYQTEVISDELAQLDRLAANDFDPAKQAIVAEPIPALGQAPSQTLTPTVSYE PNRALVQVETSAAGLLVLADAYTNDWQVSVDGQTAQLYRTNYALRGVWVDAGQHTVEFSYRPKSLIVGGWVSGLSLALIL LGLALSWYKTRKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90714; Mature: 90583
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMQPSLFLRQWQRWWPYLSITFVALLLLWRVVLGNIFLPLDIVAHLHPWRFSYERVAV CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEE NNPINSDLVTQIYPRRLVTNQILEQGALPLWNPTILTGTPLLADGQLAFFYPLSWLFVLL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHH PVGYAFGIYTLLNVWLAGIGTFKFAQRMQLEPMPATLAAVGYMLSGFLLNWLHFPEFSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH CAMLPWCFWAVLRACQSQRWHDWLLASLVLALPLVSQIQLAFYVYVGVGCLLLAQLLALP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TWRLRFQQIGQFSSAIGLALGLSAVQLLPQIALSAQGQRLDIGSGLGSASSIMVWLLRLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHH LPIVDGAARETASAWQPHLLQGIQPYAGIVSLALAGLAIWRSKQPGVRLFACLALGSFAV HHHHCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AIGTPLLQLLLWLVPPYRQFADHQRWFSLWGFAIALLAGFGLQRLQQPSNKPNRALWVQR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH GLLLLGLIGVAGWALQHIALFTVDSRYAQYSTMLRLALNPTSLAILGLSGLALVGLLIKR HHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHH IPRRWSNLAVLLILLGDLLWYGGSYNTSIDPAIFQPTADQQASLAAEPALQDPAILYPPT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHCCCCCCCCCEEECCCC RQINFLLSQPGVFRVFGADYQAMPTNVFSAFGLEDIRGYQSLYLAQYNRLTRLMDGKDYH CCEEEEECCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH KLGEGGNSLHAYFTMAYNQRRLLNMLNVEYLIFTPNSPNPELYQPLELVQRNDEGTIYRN HHCCCCCCEEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEC PEVLPRAWMVYQTEVISDELAQLDRLAANDFDPAKQAIVAEPIPALGQAPSQTLTPTVSY CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECC EPNRALVQVETSAAGLLVLADAYTNDWQVSVDGQTAQLYRTNYALRGVWVDAGQHTVEFS CCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEHEECCEEEEEEEEECCCEEEEEE YRPKSLIVGGWVSGLSLALILLGLALSWYKTRKAA ECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAMQPSLFLRQWQRWWPYLSITFVALLLLWRVVLGNIFLPLDIVAHLHPWRFSYERVAV CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEE NNPINSDLVTQIYPRRLVTNQILEQGALPLWNPTILTGTPLLADGQLAFFYPLSWLFVLL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHH PVGYAFGIYTLLNVWLAGIGTFKFAQRMQLEPMPATLAAVGYMLSGFLLNWLHFPEFSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH CAMLPWCFWAVLRACQSQRWHDWLLASLVLALPLVSQIQLAFYVYVGVGCLLLAQLLALP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TWRLRFQQIGQFSSAIGLALGLSAVQLLPQIALSAQGQRLDIGSGLGSASSIMVWLLRLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHH LPIVDGAARETASAWQPHLLQGIQPYAGIVSLALAGLAIWRSKQPGVRLFACLALGSFAV HHHHCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AIGTPLLQLLLWLVPPYRQFADHQRWFSLWGFAIALLAGFGLQRLQQPSNKPNRALWVQR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH GLLLLGLIGVAGWALQHIALFTVDSRYAQYSTMLRLALNPTSLAILGLSGLALVGLLIKR HHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHH IPRRWSNLAVLLILLGDLLWYGGSYNTSIDPAIFQPTADQQASLAAEPALQDPAILYPPT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHCCCCCCCCCEEECCCC RQINFLLSQPGVFRVFGADYQAMPTNVFSAFGLEDIRGYQSLYLAQYNRLTRLMDGKDYH CCEEEEECCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH KLGEGGNSLHAYFTMAYNQRRLLNMLNVEYLIFTPNSPNPELYQPLELVQRNDEGTIYRN HHCCCCCCEEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEC PEVLPRAWMVYQTEVISDELAQLDRLAANDFDPAKQAIVAEPIPALGQAPSQTLTPTVSY CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECC EPNRALVQVETSAAGLLVLADAYTNDWQVSVDGQTAQLYRTNYALRGVWVDAGQHTVEFS CCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEHEECCEEEEEEEEECCCEEEEEE YRPKSLIVGGWVSGLSLALILLGLALSWYKTRKAA ECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA