| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is phhA [H]
Identifier: 159900364
GI number: 159900364
Start: 4829404
End: 4830147
Strand: Reverse
Name: phhA [H]
Synonym: Haur_3847
Alternate gene names: 159900364
Gene position: 4830147-4829404 (Counterclockwise)
Preceding gene: 159900365
Following gene: 159900358
Centisome position: 76.11
GC content: 52.42
Gene sequence:
>744_bases ATGGCCACCGCATCGCCAACGCTCAGCCGCTTGGAATATCCACAAGAAGATCACGATACATGGGCAGCGCTGTGGCAGCG TCAAATGCCCCTCGCGCAACAACATGCTTGCAAGCTATTTCTCGAAGGCATCGATATTTTGAATCTCGATCGCACCCACT TGCCCGACCCATTAGCAGTTAGCGATTACCTGAACACGCTGACTGGCTGGGCTTTGGGCGATGCCCAAAATGCCTATCTT GGGCCAACCGAGTGGTTTGAGCATATCGCTGAGCGCCGTTTTCCGGTCACCAACTATATTCGCCGCCCGCATGAACTCGA ATTTACGCCGCTGCCCGATTTGTTTCACGAGTATTTTGGCCACTTGCCAGCCTTTACCAACCGCGAATTTGCCGATATTG CCCAATTGTTCGGGCCGCTGTATCTCTCGGCCAAAGATGAACGCCAGCAATTAGGCATTGCACGGATTTGGTGGTTTAGC ACCGAGTTTGGTTTGTTGCGTGAAAACGGCGAGTTGAAGGTTTTGGGGGCTGGGTTGCTCTCATCTCCAGGCGAGTTATT GCACGCGCTCAATCCCGAAACCCCGCGCTATGAGTTTGATATTGAACGGGTTGCCGACACCGCTTCAGCACCCTATGGCT ACCACGAGCACTACTTCATCCTCAATAGCCTCGATCACTTGCGCTCAATCGTCTATGAATATGCCGAGTTAGAAGGCTTA CCCAAGCCTCAATTGCCGTTATAA
Upstream 100 bases:
>100_bases TTTGGTACAATAGCGAGGCAACTATTTTGGCACTGCTGCCACTCCCACTCCCATGCTTGGGCTTGGTTGGCAGCCTATGG CTTACACAAAGGAGTGATCA
Downstream 100 bases:
>100_bases AACCACAACATGCCCTCACCCCCTAGCCCCCTCTCCCGCTCAGCGAGCGAGGGGGAAGCAGCCCAGCATGACGGGTGGAA TGCCCCTCGCCCGCCGCAGT
Product: aromatic amino acid hydroxylase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MATASPTLSRLEYPQEDHDTWAALWQRQMPLAQQHACKLFLEGIDILNLDRTHLPDPLAVSDYLNTLTGWALGDAQNAYL GPTEWFEHIAERRFPVTNYIRRPHELEFTPLPDLFHEYFGHLPAFTNREFADIAQLFGPLYLSAKDERQQLGIARIWWFS TEFGLLRENGELKVLGAGLLSSPGELLHALNPETPRYEFDIERVADTASAPYGYHEHYFILNSLDHLRSIVYEYAELEGL PKPQLPL
Sequences:
>Translated_247_residues MATASPTLSRLEYPQEDHDTWAALWQRQMPLAQQHACKLFLEGIDILNLDRTHLPDPLAVSDYLNTLTGWALGDAQNAYL GPTEWFEHIAERRFPVTNYIRRPHELEFTPLPDLFHEYFGHLPAFTNREFADIAQLFGPLYLSAKDERQQLGIARIWWFS TEFGLLRENGELKVLGAGLLSSPGELLHALNPETPRYEFDIERVADTASAPYGYHEHYFILNSLDHLRSIVYEYAELEGL PKPQLPL >Mature_246_residues ATASPTLSRLEYPQEDHDTWAALWQRQMPLAQQHACKLFLEGIDILNLDRTHLPDPLAVSDYLNTLTGWALGDAQNAYLG PTEWFEHIAERRFPVTNYIRRPHELEFTPLPDLFHEYFGHLPAFTNREFADIAQLFGPLYLSAKDERQQLGIARIWWFST EFGLLRENGELKVLGAGLLSSPGELLHALNPETPRYEFDIERVADTASAPYGYHEHYFILNSLDHLRSIVYEYAELEGLP KPQLPL
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=232, Percent_Identity=34.051724137931, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI88900505, Length=232, Percent_Identity=34.051724137931, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI31795563, Length=231, Percent_Identity=31.6017316017316, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI88900501, Length=232, Percent_Identity=34.051724137931, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI4759248, Length=231, Percent_Identity=30.3030303030303, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI4557819, Length=240, Percent_Identity=30.8333333333333, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71980736, Length=229, Percent_Identity=31.0043668122271, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI115533973, Length=227, Percent_Identity=31.2775330396476, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI115532103, Length=227, Percent_Identity=31.2775330396476, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17531391, Length=234, Percent_Identity=31.1965811965812, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71980731, Length=152, Percent_Identity=27.6315789473684, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI62472054, Length=240, Percent_Identity=30.4166666666667, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI24660393, Length=240, Percent_Identity=30.4166666666667, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI17136774, Length=222, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI17136776, Length=225, Percent_Identity=32.8888888888889, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24654994, Length=232, Percent_Identity=30.6034482758621, Blast_Score=103, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 28431; Mature: 28300
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATASPTLSRLEYPQEDHDTWAALWQRQMPLAQQHACKLFLEGIDILNLDRTHLPDPLAV CCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCHHCCCCCCHH SDYLNTLTGWALGDAQNAYLGPTEWFEHIAERRFPVTNYIRRPHELEFTPLPDLFHEYFG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHH HLPAFTNREFADIAQLFGPLYLSAKDERQQLGIARIWWFSTEFGLLRENGELKVLGAGLL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCEEECCCCEEEEECCHH SSPGELLHALNPETPRYEFDIERVADTASAPYGYHEHYFILNSLDHLRSIVYEYAELEGL CCHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PKPQLPL CCCCCCC >Mature Secondary Structure ATASPTLSRLEYPQEDHDTWAALWQRQMPLAQQHACKLFLEGIDILNLDRTHLPDPLAV CCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCHHCCCCCCHH SDYLNTLTGWALGDAQNAYLGPTEWFEHIAERRFPVTNYIRRPHELEFTPLPDLFHEYFG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHH HLPAFTNREFADIAQLFGPLYLSAKDERQQLGIARIWWFSTEFGLLRENGELKVLGAGLL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCEEECCCCEEEEECCHH SSPGELLHALNPETPRYEFDIERVADTASAPYGYHEHYFILNSLDHLRSIVYEYAELEGL CCHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PKPQLPL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]