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The map label for this gene is yycA [H]

Identifier: 159900139

GI number: 159900139

Start: 4552399

End: 4554483

Strand: Reverse

Name: yycA [H]

Synonym: Haur_3622

Alternate gene names: 159900139

Gene position: 4554483-4552399 (Counterclockwise)

Preceding gene: 159900140

Following gene: 159900138

Centisome position: 71.76

GC content: 55.25

Gene sequence:

>2085_bases
ATGAGCGCATCAACCACGACGAGCAATCTGCGCCGCCCATTGGCTTGGCGGATTGCCCAATTAACCCGTAGCCAAGCGTT
GGTCCTGCTGAGTATCATTTTGCTATGTGCTGGCTGGCTGCGTTTGCAGAATTTCGCTGCTGTAGCTGAAGGCAATACCT
ACTACACCGCCGCCACCGTTGCCATGACCCAATCGTGGCATAACTTCTTCTTTGCAGCAGCCGAGCCTGGTGGCTCAGTC
ACAATTGACAAGCCAGCGCTAGGGTTATGGATTCAGGCGATTTTTGGCAAGTTGTTTGGGGTTAGTGGCACAGTGGTGGT
GCTGCCGCAAGTTTTGGCTGGGCTAGCCACAATTGGCCTGCTATATTGGATTGTGGCGCGGCGCTGGGGGCGGTCGGCAG
GCTTATTGGCGGCAGCGATTCAGGCGATTAGCCCAATTAGCATCGCCGTCGAACGTACTAACAATCTTGATGCGTTGTTG
ATCGTGACTTTGGTTGGGGCGATGGCCTTGTTTTTGGTGGCAACCGAACGTGCCAGCACTAAATATTTGTTATTGGCAGG
TGCAGTGGTTGGCCTCGGCTTTAATATCAAAATGCTACAGGCCTTTTTGCCCTTGCCAGCCTTTTATGCGATGTATTTTT
TTGCTGCCAAAACTGGCTGGTGGCGTAAGCTTTGGCAACTTGGACTGACCACACCTGTGCTGTTGGCGGTCAGCTTTTCG
TGGGCAATCGCGGTTGATCTGGTTCCAGCCAGCGAACGGCCATACATCGGTAGTAGCGATACCAACTCGGTTGTCAACTT
GATTTTGGGCTACAACGGGGTTGAGCGCTTGACTGGACGCGAAGGCCAAGCCATGGGCGGCGCAATTCCAACAACTGATG
ATCGCCAGCGACCCAATGCCACCGATGGTAATGCTCAAATGCCTGCAATGCCCAATGGCAACGCACAAACTCCGCCCAAC
GGTATGACCGATGAAGGCATGCGCGGCCAATTTGGCGGCCAAACTGGCCGCACTGGTGGCGGTGGCCCAGGCATGGATAG
CGGCGAATCGGGTTTATTCCGAATGTTCAGTTCACCGATGAACACTAACATTGGTTGGTTGCTAGGAGCGGCACTCTTCG
CCGTGGTTGGCTTGGCTGCCCACTACATCAAGCAACGCCGCTGGCCCGATGCCGATGTTTGGGGCTGGGCTGGTTGGCTG
GTTACTGCCTTTGTCGTGCTGAGTTTTGCTGGTTTTTCGCATGGCTACTATAGCGCTACGATTGCTCCGGCGATTGCCGG
CACACTGGCAATTGGCATCACGGTTTGGCGACGCAGCGCCAGCAAGATCGTTGGTTTATGGCTCATTGGTTTGGTAGCAG
CGGCCTTGGTAGTGCAAGTGATTGCTGCGCAGCCCAGCGTCAGCGGCTGGCTGATTCCCTCAGTGGCACTTGGGTTGGCG
CTGGTGGCGGCTGGCTTGGCATTCCGAGCTTCGTGGCGGGTGGCAGCAACGGCGGTTGGCATCGCCGCGATTCTGCTCAT
CCCTAGTGAATGGGCCTACAAAACGTCGGCGATGGAGCAAATGAATACAACCTTGCCCAGCGCCGCTGCCCCAACCGATA
ATGCCACTGGCTTTGCGGCGGGCTTTGCTGGCAATCGTAACCGCTCGGATAGCAGCAGCCCCAGCGCTTTGGCAACCTAT
CTACAAGAGCGTACTAGCGATACTTACTATATGCTCGCCGTGCCAAGCTCGATGATGGGTTCGTCGTTGGTGATTGAAAC
TGGGCGGCCTGTTTTGATGATGGGCGGTTTCTCCGGCAGTGATCCGGTGATTGATGCCGCTGATATTGCCCAGTTGGTAG
CCGACGGCAAATTGCGCTACATCATGACTGGCGGTATGGGCGGCGCTGGCCGTGGTGGCAGTTCAACGGTGCAAACTTGG
GTCCAGCAAAACTGTACGGCAGTCACTGATGCACCGAACAGTCAAGCAGGCTTTGATTTGCCAAATGGCCAAATGCCAAA
TGCTCAAGCAGCCCCCACCAATGGCAACACTGGTGGCGCACAATTTGCTCAAAACAATTCATCATTGTATCGTTGTGGCG
AATAA

Upstream 100 bases:

>100_bases
GCTATGTGCTAGCCAAGGGAGTGGCGACGATGGTTGGTTTTGCTTGGAATTTTGGTTTGAATCGAATTTGGACATTTAAT
CTTGAACATGAGGTGGTCGC

Downstream 100 bases:

>100_bases
TTCGCCTGAGGAAGTTACTTCCTTCTAGTTAACGGTACTGCTCAATGCTGAGTTCTCCGCTCGATGGCCTGCTCGTGCTC
GACCTCTCACGGGTGCTGGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MSASTTTSNLRRPLAWRIAQLTRSQALVLLSIILLCAGWLRLQNFAAVAEGNTYYTAATVAMTQSWHNFFFAAAEPGGSV
TIDKPALGLWIQAIFGKLFGVSGTVVVLPQVLAGLATIGLLYWIVARRWGRSAGLLAAAIQAISPISIAVERTNNLDALL
IVTLVGAMALFLVATERASTKYLLLAGAVVGLGFNIKMLQAFLPLPAFYAMYFFAAKTGWWRKLWQLGLTTPVLLAVSFS
WAIAVDLVPASERPYIGSSDTNSVVNLILGYNGVERLTGREGQAMGGAIPTTDDRQRPNATDGNAQMPAMPNGNAQTPPN
GMTDEGMRGQFGGQTGRTGGGGPGMDSGESGLFRMFSSPMNTNIGWLLGAALFAVVGLAAHYIKQRRWPDADVWGWAGWL
VTAFVVLSFAGFSHGYYSATIAPAIAGTLAIGITVWRRSASKIVGLWLIGLVAAALVVQVIAAQPSVSGWLIPSVALGLA
LVAAGLAFRASWRVAATAVGIAAILLIPSEWAYKTSAMEQMNTTLPSAAAPTDNATGFAAGFAGNRNRSDSSSPSALATY
LQERTSDTYYMLAVPSSMMGSSLVIETGRPVLMMGGFSGSDPVIDAADIAQLVADGKLRYIMTGGMGGAGRGGSSTVQTW
VQQNCTAVTDAPNSQAGFDLPNGQMPNAQAAPTNGNTGGAQFAQNNSSLYRCGE

Sequences:

>Translated_694_residues
MSASTTTSNLRRPLAWRIAQLTRSQALVLLSIILLCAGWLRLQNFAAVAEGNTYYTAATVAMTQSWHNFFFAAAEPGGSV
TIDKPALGLWIQAIFGKLFGVSGTVVVLPQVLAGLATIGLLYWIVARRWGRSAGLLAAAIQAISPISIAVERTNNLDALL
IVTLVGAMALFLVATERASTKYLLLAGAVVGLGFNIKMLQAFLPLPAFYAMYFFAAKTGWWRKLWQLGLTTPVLLAVSFS
WAIAVDLVPASERPYIGSSDTNSVVNLILGYNGVERLTGREGQAMGGAIPTTDDRQRPNATDGNAQMPAMPNGNAQTPPN
GMTDEGMRGQFGGQTGRTGGGGPGMDSGESGLFRMFSSPMNTNIGWLLGAALFAVVGLAAHYIKQRRWPDADVWGWAGWL
VTAFVVLSFAGFSHGYYSATIAPAIAGTLAIGITVWRRSASKIVGLWLIGLVAAALVVQVIAAQPSVSGWLIPSVALGLA
LVAAGLAFRASWRVAATAVGIAAILLIPSEWAYKTSAMEQMNTTLPSAAAPTDNATGFAAGFAGNRNRSDSSSPSALATY
LQERTSDTYYMLAVPSSMMGSSLVIETGRPVLMMGGFSGSDPVIDAADIAQLVADGKLRYIMTGGMGGAGRGGSSTVQTW
VQQNCTAVTDAPNSQAGFDLPNGQMPNAQAAPTNGNTGGAQFAQNNSSLYRCGE
>Mature_693_residues
SASTTTSNLRRPLAWRIAQLTRSQALVLLSIILLCAGWLRLQNFAAVAEGNTYYTAATVAMTQSWHNFFFAAAEPGGSVT
IDKPALGLWIQAIFGKLFGVSGTVVVLPQVLAGLATIGLLYWIVARRWGRSAGLLAAAIQAISPISIAVERTNNLDALLI
VTLVGAMALFLVATERASTKYLLLAGAVVGLGFNIKMLQAFLPLPAFYAMYFFAAKTGWWRKLWQLGLTTPVLLAVSFSW
AIAVDLVPASERPYIGSSDTNSVVNLILGYNGVERLTGREGQAMGGAIPTTDDRQRPNATDGNAQMPAMPNGNAQTPPNG
MTDEGMRGQFGGQTGRTGGGGPGMDSGESGLFRMFSSPMNTNIGWLLGAALFAVVGLAAHYIKQRRWPDADVWGWAGWLV
TAFVVLSFAGFSHGYYSATIAPAIAGTLAIGITVWRRSASKIVGLWLIGLVAAALVVQVIAAQPSVSGWLIPSVALGLAL
VAAGLAFRASWRVAATAVGIAAILLIPSEWAYKTSAMEQMNTTLPSAAAPTDNATGFAAGFAGNRNRSDSSSPSALATYL
QERTSDTYYMLAVPSSMMGSSLVIETGRPVLMMGGFSGSDPVIDAADIAQLVADGKLRYIMTGGMGGAGRGGSSTVQTWV
QQNCTAVTDAPNSQAGFDLPNGQMPNAQAAPTNGNTGGAQFAQNNSSLYRCGE

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 72749; Mature: 72618

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASTTTSNLRRPLAWRIAQLTRSQALVLLSIILLCAGWLRLQNFAAVAEGNTYYTAATV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHH
AMTQSWHNFFFAAAEPGGSVTIDKPALGLWIQAIFGKLFGVSGTVVVLPQVLAGLATIGL
HHHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LYWIVARRWGRSAGLLAAAIQAISPISIAVERTNNLDALLIVTLVGAMALFLVATERAST
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KYLLLAGAVVGLGFNIKMLQAFLPLPAFYAMYFFAAKTGWWRKLWQLGLTTPVLLAVSFS
CEEEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHC
WAIAVDLVPASERPYIGSSDTNSVVNLILGYNGVERLTGREGQAMGGAIPTTDDRQRPNA
EEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
TDGNAQMPAMPNGNAQTPPNGMTDEGMRGQFGGQTGRTGGGGPGMDSGESGLFRMFSSPM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
NTNIGWLLGAALFAVVGLAAHYIKQRRWPDADVWGWAGWLVTAFVVLSFAGFSHGYYSAT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
IAPAIAGTLAIGITVWRRSASKIVGLWLIGLVAAALVVQVIAAQPSVSGWLIPSVALGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
LVAAGLAFRASWRVAATAVGIAAILLIPSEWAYKTSAMEQMNTTLPSAAAPTDNATGFAA
HHHHHHHHHCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
GFAGNRNRSDSSSPSALATYLQERTSDTYYMLAVPSSMMGSSLVIETGRPVLMMGGFSGS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHCCCEEEEECCCCEEEECCCCCC
DPVIDAADIAQLVADGKLRYIMTGGMGGAGRGGSSTVQTWVQQNCTAVTDAPNSQAGFDL
CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCC
PNGQMPNAQAAPTNGNTGGAQFAQNNSSLYRCGE
CCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCC
>Mature Secondary Structure 
SASTTTSNLRRPLAWRIAQLTRSQALVLLSIILLCAGWLRLQNFAAVAEGNTYYTAATV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHH
AMTQSWHNFFFAAAEPGGSVTIDKPALGLWIQAIFGKLFGVSGTVVVLPQVLAGLATIGL
HHHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LYWIVARRWGRSAGLLAAAIQAISPISIAVERTNNLDALLIVTLVGAMALFLVATERAST
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KYLLLAGAVVGLGFNIKMLQAFLPLPAFYAMYFFAAKTGWWRKLWQLGLTTPVLLAVSFS
CEEEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHC
WAIAVDLVPASERPYIGSSDTNSVVNLILGYNGVERLTGREGQAMGGAIPTTDDRQRPNA
EEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
TDGNAQMPAMPNGNAQTPPNGMTDEGMRGQFGGQTGRTGGGGPGMDSGESGLFRMFSSPM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
NTNIGWLLGAALFAVVGLAAHYIKQRRWPDADVWGWAGWLVTAFVVLSFAGFSHGYYSAT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
IAPAIAGTLAIGITVWRRSASKIVGLWLIGLVAAALVVQVIAAQPSVSGWLIPSVALGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
LVAAGLAFRASWRVAATAVGIAAILLIPSEWAYKTSAMEQMNTTLPSAAAPTDNATGFAA
HHHHHHHHHCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
GFAGNRNRSDSSSPSALATYLQERTSDTYYMLAVPSSMMGSSLVIETGRPVLMMGGFSGS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHCCCEEEEECCCCEEEECCCCCC
DPVIDAADIAQLVADGKLRYIMTGGMGGAGRGGSSTVQTWVQQNCTAVTDAPNSQAGFDL
CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCC
PNGQMPNAQAAPTNGNTGGAQFAQNNSSLYRCGE
CCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]