Click here to switch to the map view.

The map label for this gene is yngA [H]

Identifier: 159900140

GI number: 159900140

Start: 4554480

End: 4554905

Strand: Reverse

Name: yngA [H]

Synonym: Haur_3623

Alternate gene names: 159900140

Gene position: 4554905-4554480 (Counterclockwise)

Preceding gene: 159900141

Following gene: 159900139

Centisome position: 71.77

GC content: 48.83

Gene sequence:

>426_bases
ATGACTATTTTAATCGCTGAAGATCGGCAACGTTGGTGGCGTTTCGCCTTGGTTGGCCTCAGCGGAACCTTGGTCGATCT
GATCTTGCTGGGCATGCTCAAAATGCTGGGTTGGGCGACGATTTTGGCCAACATTGTTTCCTACAGCGTCGGCATCATCA
ATAACTTTTGGTGGAATCGCCGTTGGACGTTTGCCAGCAACAATCCCGCTTGGTTGCCGCAATTTTTACGCTTTGGGGCA
ATTAGCCTAAGCGCCTTGGTGATCAATACCTTGATTGTGGCCGTAACCGAAGCTCCGCTCAATGATCTTTGGCAAAGCCA
TGGCTATGTGCTAGCCAAGGGAGTGGCGACGATGGTTGGTTTTGCTTGGAATTTTGGTTTGAATCGAATTTGGACATTTA
ATCTTGAACATGAGGTGGTCGCATGA

Upstream 100 bases:

>100_bases
GTTTACACTCAAGTTTGCGCAAGCCACATCAATGGAGATCGAAGCGGTACGTCATGGCTATTTAGCAGTTGTTACAAAAC
CACGGTCGGAGGACGTTTCC

Downstream 100 bases:

>100_bases
GCGCATCAACCACGACGAGCAATCTGCGCCGCCCATTGGCTTGGCGGATTGCCCAATTAACCCGTAGCCAAGCGTTGGTC
CTGCTGAGTATCATTTTGCT

Product: GtrA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTILIAEDRQRWWRFALVGLSGTLVDLILLGMLKMLGWATILANIVSYSVGIINNFWWNRRWTFASNNPAWLPQFLRFGA
ISLSALVINTLIVAVTEAPLNDLWQSHGYVLAKGVATMVGFAWNFGLNRIWTFNLEHEVVA

Sequences:

>Translated_141_residues
MTILIAEDRQRWWRFALVGLSGTLVDLILLGMLKMLGWATILANIVSYSVGIINNFWWNRRWTFASNNPAWLPQFLRFGA
ISLSALVINTLIVAVTEAPLNDLWQSHGYVLAKGVATMVGFAWNFGLNRIWTFNLEHEVVA
>Mature_140_residues
TILIAEDRQRWWRFALVGLSGTLVDLILLGMLKMLGWATILANIVSYSVGIINNFWWNRRWTFASNNPAWLPQFLRFGAI
SLSALVINTLIVAVTEAPLNDLWQSHGYVLAKGVATMVGFAWNFGLNRIWTFNLEHEVVA

Specific function: Unknown

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gtrA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007267 [H]

Pfam domain/function: PF04138 GtrA [H]

EC number: NA

Molecular weight: Translated: 16007; Mature: 15876

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILIAEDRQRWWRFALVGLSGTLVDLILLGMLKMLGWATILANIVSYSVGIINNFWWNR
CEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RWTFASNNPAWLPQFLRFGAISLSALVINTLIVAVTEAPLNDLWQSHGYVLAKGVATMVG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEHHHHHHHHH
FAWNFGLNRIWTFNLEHEVVA
HHHHCCCCEEEEECCCCEECC
>Mature Secondary Structure 
TILIAEDRQRWWRFALVGLSGTLVDLILLGMLKMLGWATILANIVSYSVGIINNFWWNR
EEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RWTFASNNPAWLPQFLRFGAISLSALVINTLIVAVTEAPLNDLWQSHGYVLAKGVATMVG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEHHHHHHHHH
FAWNFGLNRIWTFNLEHEVVA
HHHHCCCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]