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The map label for this gene is rfaG [C]

Identifier: 159900099

GI number: 159900099

Start: 4503917

End: 4505062

Strand: Direct

Name: rfaG [C]

Synonym: Haur_3582

Alternate gene names: 159900099

Gene position: 4503917-4505062 (Clockwise)

Preceding gene: 159900098

Following gene: 159900100

Centisome position: 70.97

GC content: 54.97

Gene sequence:

>1146_bases
ATGAACGACACGTTACACGTAGCCATGATCATCCAAGGCTATTTTCCGCGCATCGGCGGCGCTGAACGCCAGCTTGCGGC
TTTGGCTCCTTTTTTGGCCGCTGAAGGCGTGGCAATTAGCGTGCTGACACGACGGTATGCAGGTTTCAAGCCCTTCGAGA
TAATCGACAATGTGCCAGTCCATCGCTTGCCAATTCCTGGGCCTGTGCCAACTGCGGCCTTGGTTTTCACCGCAGCAGCG
ATTCCCTTGCTTTGGCGTTTGAAGCCAAATTTGGTCCATGCTCACGAAATGTTTTCGCCTGCCACCACGGCGATTGCGGC
CAAACAAGCCTTGGGTCTGCCCTACGCCGTGACCGCCCATCGTTCAGGGCCACTGGGAGATGTGCTGCGCATGCAACAAC
GTCCGTTTGGCAAAGGCCGGCTGGAGCGCATCACCAAAACTGCCGATGCCTTTTTCACGATCAGTCGCGAAATCGATCAA
GAATTTGAGCAGATTTTGGGCATTGAGGCCAAGCGGCGACATTATGTGCCCAACGGGGTTGATCCTGAAAAATATTGCCC
AATCGCTGCCGAAGCCAAAACTGCGCTACGCCGCGAACTCAATCTGCCAACCGAAGGCACAATTACGCTGTATGCTGGGC
GGCTCTCTGAGGAAAAACGGGTGCGCTATTTGGTTGAGGCCTGGCCAGCAATTCGTGCCAAACATCCCGATGCGACCTTA
TTGATTTTGGGACAGGGGCCAGAAGAAGCCAATCTCAAGGCCAAAACCAGCGATGGAGTGATTTTTGGCGGGGCGGTGCA
TAATGTGCCACCCTATTTGCAAGCCGCCGATGTGTTCGTGCTGCCATCGATTGCCGAGGGTTTTTCGGTGGCAATGCTCG
AAGCCATGGCCAGCGAATTAGCCGTCGTGATCACCGATGTTGGCGGTGCACGCGATGCGATTGACGATACTGTGCATGGC
TTGGTGATTCCGCCCGACGATCAGCCAGCGCTTGAACAAGCTTTGTTGGCAGTTTTGGGCGATCAAGCCTCGCGCCAACG
CATGGGCCAAGCCGCTCGCCAACGGGTGCAACAAGAGTTTGCCCTGAGCGTGATTGCCAAGCAATTGCGCGGATTGTATG
AAAATATAGCCACGTTAAGAACATAG

Upstream 100 bases:

>100_bases
TTATCGAGCAATACCATAGCCCTAGCGCGTGGGTTGATCAATTATTAAGTTTGTATACCGCCGCCCACGAGGGCGTTGAC
CAGCGCGAGGCTGTCTCGGC

Downstream 100 bases:

>100_bases
AACATAAAGCATAGAACATAGGAGCGAGGGTTCAGGAGCTAGGGGTCGGGGAGAGAGTAGTCTTGCTTTAACGCAGAGGC
ACAGAGAACGAAGAGGATGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNDTLHVAMIIQGYFPRIGGAERQLAALAPFLAAEGVAISVLTRRYAGFKPFEIIDNVPVHRLPIPGPVPTAALVFTAAA
IPLLWRLKPNLVHAHEMFSPATTAIAAKQALGLPYAVTAHRSGPLGDVLRMQQRPFGKGRLERITKTADAFFTISREIDQ
EFEQILGIEAKRRHYVPNGVDPEKYCPIAAEAKTALRRELNLPTEGTITLYAGRLSEEKRVRYLVEAWPAIRAKHPDATL
LILGQGPEEANLKAKTSDGVIFGGAVHNVPPYLQAADVFVLPSIAEGFSVAMLEAMASELAVVITDVGGARDAIDDTVHG
LVIPPDDQPALEQALLAVLGDQASRQRMGQAARQRVQQEFALSVIAKQLRGLYENIATLRT

Sequences:

>Translated_381_residues
MNDTLHVAMIIQGYFPRIGGAERQLAALAPFLAAEGVAISVLTRRYAGFKPFEIIDNVPVHRLPIPGPVPTAALVFTAAA
IPLLWRLKPNLVHAHEMFSPATTAIAAKQALGLPYAVTAHRSGPLGDVLRMQQRPFGKGRLERITKTADAFFTISREIDQ
EFEQILGIEAKRRHYVPNGVDPEKYCPIAAEAKTALRRELNLPTEGTITLYAGRLSEEKRVRYLVEAWPAIRAKHPDATL
LILGQGPEEANLKAKTSDGVIFGGAVHNVPPYLQAADVFVLPSIAEGFSVAMLEAMASELAVVITDVGGARDAIDDTVHG
LVIPPDDQPALEQALLAVLGDQASRQRMGQAARQRVQQEFALSVIAKQLRGLYENIATLRT
>Mature_381_residues
MNDTLHVAMIIQGYFPRIGGAERQLAALAPFLAAEGVAISVLTRRYAGFKPFEIIDNVPVHRLPIPGPVPTAALVFTAAA
IPLLWRLKPNLVHAHEMFSPATTAIAAKQALGLPYAVTAHRSGPLGDVLRMQQRPFGKGRLERITKTADAFFTISREIDQ
EFEQILGIEAKRRHYVPNGVDPEKYCPIAAEAKTALRRELNLPTEGTITLYAGRLSEEKRVRYLVEAWPAIRAKHPDATL
LILGQGPEEANLKAKTSDGVIFGGAVHNVPPYLQAADVFVLPSIAEGFSVAMLEAMASELAVVITDVGGARDAIDDTVHG
LVIPPDDQPALEQALLAVLGDQASRQRMGQAARQRVQQEFALSVIAKQLRGLYENIATLRT

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=322, Percent_Identity=24.8447204968944, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41401; Mature: 41401

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTLHVAMIIQGYFPRIGGAERQLAALAPFLAAEGVAISVLTRRYAGFKPFEIIDNVPV
CCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCC
HRLPIPGPVPTAALVFTAAAIPLLWRLKPNLVHAHEMFSPATTAIAAKQALGLPYAVTAH
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEECC
RSGPLGDVLRMQQRPFGKGRLERITKTADAFFTISREIDQEFEQILGIEAKRRHYVPNGV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
DPEKYCPIAAEAKTALRRELNLPTEGTITLYAGRLSEEKRVRYLVEAWPAIRAKHPDATL
CHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE
LILGQGPEEANLKAKTSDGVIFGGAVHNVPPYLQAADVFVLPSIAEGFSVAMLEAMASEL
EEEECCCCCCCCEEECCCCEEECCHHHCCCCCHHHCCEEEECCHHCCHHHHHHHHHHHHH
AVVITDVGGARDAIDDTVHGLVIPPDDQPALEQALLAVLGDQASRQRMGQAARQRVQQEF
EEEEECCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALSVIAKQLRGLYENIATLRT
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDTLHVAMIIQGYFPRIGGAERQLAALAPFLAAEGVAISVLTRRYAGFKPFEIIDNVPV
CCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCC
HRLPIPGPVPTAALVFTAAAIPLLWRLKPNLVHAHEMFSPATTAIAAKQALGLPYAVTAH
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEECC
RSGPLGDVLRMQQRPFGKGRLERITKTADAFFTISREIDQEFEQILGIEAKRRHYVPNGV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
DPEKYCPIAAEAKTALRRELNLPTEGTITLYAGRLSEEKRVRYLVEAWPAIRAKHPDATL
CHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE
LILGQGPEEANLKAKTSDGVIFGGAVHNVPPYLQAADVFVLPSIAEGFSVAMLEAMASEL
EEEECCCCCCCCEEECCCCEEECCHHHCCCCCHHHCCEEEECCHHCCHHHHHHHHHHHHH
AVVITDVGGARDAIDDTVHGLVIPPDDQPALEQALLAVLGDQASRQRMGQAARQRVQQEF
EEEEECCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALSVIAKQLRGLYENIATLRT
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]