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The map label for this gene is wcaL [C]

Identifier: 159900098

GI number: 159900098

Start: 4502784

End: 4503920

Strand: Direct

Name: wcaL [C]

Synonym: Haur_3581

Alternate gene names: 159900098

Gene position: 4502784-4503920 (Clockwise)

Preceding gene: 159900097

Following gene: 159900099

Centisome position: 70.95

GC content: 53.39

Gene sequence:

>1137_bases
ATGCACGTTGTTCAGGTGATCGATTCGCTCTATCGTGGTGGAGCACAACAATTGCTGGTAACCTTCGCGATCGAAGCCCA
ACGCCGTGGGATCAAAACCAGCGTTGTTTGTCTCAAGGATGAAGATCGCGGCAGCAACTTGGTTGAACGGCTGAATGGTT
TGGGCGTTGAAGTGCTGCGTTTGGCTGCGCCCAAAATGCTGGCCCCTAAACGAATCTGGCAATTAACCCGTTGGCTGCGG
CGCAATCAGGTCAGTGTGGTGCATACCCATTTGACCTATGGCAATGTCGTAGGTATTTTGGCAGCCCGTTTGGCTAATAT
TCCTGTGGTGGCGACGATGCACTTAGCGGGCTTCGATCCATCAATTGCCAATCGCCAACAGCAGTTTGAGGCCCAAGTGG
TACAGCGTTTGGCGCAGCAAATTATCGCTGTTGGCTATACCACTCGCGATGCCTACCAGCCAATTATGCCCAATCGCCAG
CTGCATGTGGTGCATAATGCCGTGGTAGCCGTGCCAGAAATTAGCCCTGAGCAACGCCAAACCACGCGCGAAGCAGTGTT
GGGCGACCCAAATTTGACCATGTTGATCAACGTTGGGCGTTTTGCGGCAATCAAAGATCTGCCAACCTTGATCGATGCCT
TTGCCTTGGTGCATGCTCAACATCCCCAGGCGCGGCTCGTTTTGGCGGGCGAAGGCGATCAACGACCCAAAATCGAAGCC
AAAATTAACGCACACCAATTGCCTGCAGTGGTCAATTTGCTTGGCGCACGCGATGATATTCCAGTGCTATTGCGTAGCGC
CGATTTGTTTGTCAATTCGTCAGCCAACGAAGGATTGCCGATCGCCGTGCTCGAAGCCATGGCCGCAGGCTTGCCGATTA
TTGCCACCAAAGTTGGCGACGTGCCGCATGTGGTTCGCGAACAAGCGGGCATTACGGTTGCGCCGCATGATCATCAAGCC
TTAGCTGCTGCAATTAATCAAGTTTTGAGCGAGCCAAGCCAGATCCAGGCGATGCAACAGGCTGCTCAACAAATTATCGA
GCAATACCATAGCCCTAGCGCGTGGGTTGATCAATTATTAAGTTTGTATACCGCCGCCCACGAGGGCGTTGACCAGCGCG
AGGCTGTCTCGGCATGA

Upstream 100 bases:

>100_bases
GTGGGCATCGGCTCCTATGCTGGAACTTTGTGGTTTGGTCAGCGCGAAGTTCTGACCCAAGCAGGCCAAACCTTACGTGG
TGCGGTGGCACGGAGATAAT

Downstream 100 bases:

>100_bases
ACGACACGTTACACGTAGCCATGATCATCCAAGGCTATTTTCCGCGCATCGGCGGCGCTGAACGCCAGCTTGCGGCTTTG
GCTCCTTTTTTGGCCGCTGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MHVVQVIDSLYRGGAQQLLVTFAIEAQRRGIKTSVVCLKDEDRGSNLVERLNGLGVEVLRLAAPKMLAPKRIWQLTRWLR
RNQVSVVHTHLTYGNVVGILAARLANIPVVATMHLAGFDPSIANRQQQFEAQVVQRLAQQIIAVGYTTRDAYQPIMPNRQ
LHVVHNAVVAVPEISPEQRQTTREAVLGDPNLTMLINVGRFAAIKDLPTLIDAFALVHAQHPQARLVLAGEGDQRPKIEA
KINAHQLPAVVNLLGARDDIPVLLRSADLFVNSSANEGLPIAVLEAMAAGLPIIATKVGDVPHVVREQAGITVAPHDHQA
LAAAINQVLSEPSQIQAMQQAAQQIIEQYHSPSAWVDQLLSLYTAAHEGVDQREAVSA

Sequences:

>Translated_378_residues
MHVVQVIDSLYRGGAQQLLVTFAIEAQRRGIKTSVVCLKDEDRGSNLVERLNGLGVEVLRLAAPKMLAPKRIWQLTRWLR
RNQVSVVHTHLTYGNVVGILAARLANIPVVATMHLAGFDPSIANRQQQFEAQVVQRLAQQIIAVGYTTRDAYQPIMPNRQ
LHVVHNAVVAVPEISPEQRQTTREAVLGDPNLTMLINVGRFAAIKDLPTLIDAFALVHAQHPQARLVLAGEGDQRPKIEA
KINAHQLPAVVNLLGARDDIPVLLRSADLFVNSSANEGLPIAVLEAMAAGLPIIATKVGDVPHVVREQAGITVAPHDHQA
LAAAINQVLSEPSQIQAMQQAAQQIIEQYHSPSAWVDQLLSLYTAAHEGVDQREAVSA
>Mature_378_residues
MHVVQVIDSLYRGGAQQLLVTFAIEAQRRGIKTSVVCLKDEDRGSNLVERLNGLGVEVLRLAAPKMLAPKRIWQLTRWLR
RNQVSVVHTHLTYGNVVGILAARLANIPVVATMHLAGFDPSIANRQQQFEAQVVQRLAQQIIAVGYTTRDAYQPIMPNRQ
LHVVHNAVVAVPEISPEQRQTTREAVLGDPNLTMLINVGRFAAIKDLPTLIDAFALVHAQHPQARLVLAGEGDQRPKIEA
KINAHQLPAVVNLLGARDDIPVLLRSADLFVNSSANEGLPIAVLEAMAAGLPIIATKVGDVPHVVREQAGITVAPHDHQA
LAAAINQVLSEPSQIQAMQQAAQQIIEQYHSPSAWVDQLLSLYTAAHEGVDQREAVSA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=240, Percent_Identity=25.4166666666667, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41181; Mature: 41181

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVVQVIDSLYRGGAQQLLVTFAIEAQRRGIKTSVVCLKDEDRGSNLVERLNGLGVEVLR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHH
LAAPKMLAPKRIWQLTRWLRRNQVSVVHTHLTYGNVVGILAARLANIPVVATMHLAGFDP
HHCCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
SIANRQQQFEAQVVQRLAQQIIAVGYTTRDAYQPIMPNRQLHVVHNAVVAVPEISPEQRQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEHHEEECCCCCCHHHH
TTREAVLGDPNLTMLINVGRFAAIKDLPTLIDAFALVHAQHPQARLVLAGEGDQRPKIEA
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEE
KINAHQLPAVVNLLGARDDIPVLLRSADLFVNSSANEGLPIAVLEAMAAGLPIIATKVGD
ECCHHHHHHHHHHHCCCCCCHHHEEHHHHEEECCCCCCCHHHHHHHHHCCCCEEEECCCC
VPHVVREQAGITVAPHDHQALAAAINQVLSEPSQIQAMQQAAQQIIEQYHSPSAWVDQLL
CHHHHHHCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SLYTAAHEGVDQREAVSA
HHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MHVVQVIDSLYRGGAQQLLVTFAIEAQRRGIKTSVVCLKDEDRGSNLVERLNGLGVEVLR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHH
LAAPKMLAPKRIWQLTRWLRRNQVSVVHTHLTYGNVVGILAARLANIPVVATMHLAGFDP
HHCCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
SIANRQQQFEAQVVQRLAQQIIAVGYTTRDAYQPIMPNRQLHVVHNAVVAVPEISPEQRQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEHHEEECCCCCCHHHH
TTREAVLGDPNLTMLINVGRFAAIKDLPTLIDAFALVHAQHPQARLVLAGEGDQRPKIEA
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEE
KINAHQLPAVVNLLGARDDIPVLLRSADLFVNSSANEGLPIAVLEAMAAGLPIIATKVGD
ECCHHHHHHHHHHHCCCCCCHHHEEHHHHEEECCCCCCCHHHHHHHHHCCCCEEEECCCC
VPHVVREQAGITVAPHDHQALAAAINQVLSEPSQIQAMQQAAQQIIEQYHSPSAWVDQLL
CHHHHHHCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SLYTAAHEGVDQREAVSA
HHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]