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The map label for this gene is ydaM [H]

Identifier: 159900100

GI number: 159900100

Start: 4505328

End: 4506515

Strand: Direct

Name: ydaM [H]

Synonym: Haur_3583

Alternate gene names: 159900100

Gene position: 4505328-4506515 (Clockwise)

Preceding gene: 159900099

Following gene: 159900101

Centisome position: 70.99

GC content: 51.43

Gene sequence:

>1188_bases
ATGATTGCGGCGTTATTTTGGCTGTTTACAGGCAGCGTCATCTATACCTATGCTGGTTATCCAGCGCTGTTGACTTTACT
AGCACGCTTTCGACGTGAGCGCGGGCCTTATCCGCACGCTGAGCCAGCAGTTACTTTGCTGATTGCGGCCTACAACGAAG
AGGCTGAAATCGCTCGCAAAATTGAAAACTCGTTGGCCTTGGATTATCCACGTGAGCAACTGCAACTATTAATTATTGCC
GATGGCTCAAGCGACCGCACCCCCGAAATCGTGCAGCAATATGCCGATCGCGGCGTGGAATTGCTGTATGAAGCTCCACG
GCGCGGCAAAATGGCGGCGATCAATCGGGCAATTCCATTTGTGCGCGGCGAAATTATTGTTTTCTCTGATGCGAACAATC
GCTATGATGCCAATGTGATTCGCGAATTGGTTGCACCATTTGCCGATGCTGATGTTGGCGCTGTTTCTGGCGCAAAGGTA
ATCGAAAAGGGCGACGGCGCTTTGGGCGAATCCGAAGGGCTGTATTGGCGCTACGAATCGTTCGTTAAAAAGCAAGAAAG
CAAATTGGCTGGTTGTACCGCCGTTGCTGGCGAAGTGCTAGCGATTCGCAGCGATTTATTTGAGTCGCCGCCCGATGAAA
TTATCAACGACGACACCCATATGGGCATGCGGATCATCGCCCGTGGCTTTCGGATTCACTATGCGCCCCAGGCTCGCTCA
CACGAACGGGTTTCGCAATCGGCGCAGGATGAAATTGCCCGTCGCGCTCGAATTTTCGCTGGACGCTATCAAGCCATTAC
TTATGCTCGTAGTTTGTGGCCATTCCGCCGCCCACTCGCCTTGTGGCAATTACTCTCGCACCAAACCTTACGCACCTTGG
TAGCGGTCAATATGGTCGGCGCTTTGGTGATGAACATTCTGGCAGTGCTCTCGCCAAGTAAGGCAAAATCGCATAAACTA
CTACGTTTAGCAGCACCATTCAATTGGCTGTTGTTAATCTTCCAAATTGTGTTCTACACCATGGCTTGGCTGGGTGGCCG
AGTTGACTCAAATAGTAAACTAGGCAAGGTGGTTTACATTCCAACCTTCCTAGTCAATAGCAATTGGGCTGGCTTGATTG
GCCTATATCGCTTTGTCCGACGACGACAAACCACGCTATGGCAGCGAGTGGGGCGGCGCACGAACTAA

Upstream 100 bases:

>100_bases
GTGGCTAAAACAAGAATTTCGCGATCTTCGCGTTCTTCGTGGTTACAACCTTCGTGCACTTCGTGTCCTTCGTGGATCAA
TAGTGATTAAGGAATATTCA

Downstream 100 bases:

>100_bases
CTTCGACTGTTGTTGGTGAACTGAGGTGATCCTATGTGTGGTATTTGTGGCATTGTCTATTTTGATCGCAGCCGTACAGC
CGAGCGACCCTTGCTCGAAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MIAALFWLFTGSVIYTYAGYPALLTLLARFRRERGPYPHAEPAVTLLIAAYNEEAEIARKIENSLALDYPREQLQLLIIA
DGSSDRTPEIVQQYADRGVELLYEAPRRGKMAAINRAIPFVRGEIIVFSDANNRYDANVIRELVAPFADADVGAVSGAKV
IEKGDGALGESEGLYWRYESFVKKQESKLAGCTAVAGEVLAIRSDLFESPPDEIINDDTHMGMRIIARGFRIHYAPQARS
HERVSQSAQDEIARRARIFAGRYQAITYARSLWPFRRPLALWQLLSHQTLRTLVAVNMVGALVMNILAVLSPSKAKSHKL
LRLAAPFNWLLLIFQIVFYTMAWLGGRVDSNSKLGKVVYIPTFLVNSNWAGLIGLYRFVRRRQTTLWQRVGRRTN

Sequences:

>Translated_395_residues
MIAALFWLFTGSVIYTYAGYPALLTLLARFRRERGPYPHAEPAVTLLIAAYNEEAEIARKIENSLALDYPREQLQLLIIA
DGSSDRTPEIVQQYADRGVELLYEAPRRGKMAAINRAIPFVRGEIIVFSDANNRYDANVIRELVAPFADADVGAVSGAKV
IEKGDGALGESEGLYWRYESFVKKQESKLAGCTAVAGEVLAIRSDLFESPPDEIINDDTHMGMRIIARGFRIHYAPQARS
HERVSQSAQDEIARRARIFAGRYQAITYARSLWPFRRPLALWQLLSHQTLRTLVAVNMVGALVMNILAVLSPSKAKSHKL
LRLAAPFNWLLLIFQIVFYTMAWLGGRVDSNSKLGKVVYIPTFLVNSNWAGLIGLYRFVRRRQTTLWQRVGRRTN
>Mature_395_residues
MIAALFWLFTGSVIYTYAGYPALLTLLARFRRERGPYPHAEPAVTLLIAAYNEEAEIARKIENSLALDYPREQLQLLIIA
DGSSDRTPEIVQQYADRGVELLYEAPRRGKMAAINRAIPFVRGEIIVFSDANNRYDANVIRELVAPFADADVGAVSGAKV
IEKGDGALGESEGLYWRYESFVKKQESKLAGCTAVAGEVLAIRSDLFESPPDEIINDDTHMGMRIIARGFRIHYAPQARS
HERVSQSAQDEIARRARIFAGRYQAITYARSLWPFRRPLALWQLLSHQTLRTLVAVNMVGALVMNILAVLSPSKAKSHKL
LRLAAPFNWLLLIFQIVFYTMAWLGGRVDSNSKLGKVVYIPTFLVNSNWAGLIGLYRFVRRRQTTLWQRVGRRTN

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=315, Percent_Identity=23.1746031746032, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 44545; Mature: 44545

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAALFWLFTGSVIYTYAGYPALLTLLARFRRERGPYPHAEPAVTLLIAAYNEEAEIARK
CHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCHHHHHHH
IENSLALDYPREQLQLLIIADGSSDRTPEIVQQYADRGVELLYEAPRRGKMAAINRAIPF
HHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHCHH
VRGEIIVFSDANNRYDANVIRELVAPFADADVGAVSGAKVIEKGDGALGESEGLYWRYES
HCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEHHHH
FVKKQESKLAGCTAVAGEVLAIRSDLFESPPDEIINDDTHMGMRIIARGFRIHYAPQARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCEEEECCCCCH
HERVSQSAQDEIARRARIFAGRYQAITYARSLWPFRRPLALWQLLSHQTLRTLVAVNMVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVMNILAVLSPSKAKSHKLLRLAAPFNWLLLIFQIVFYTMAWLGGRVDSNSKLGKVVYI
HHHHHHHHHHCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
PTFLVNSNWAGLIGLYRFVRRRQTTLWQRVGRRTN
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIAALFWLFTGSVIYTYAGYPALLTLLARFRRERGPYPHAEPAVTLLIAAYNEEAEIARK
CHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCHHHHHHH
IENSLALDYPREQLQLLIIADGSSDRTPEIVQQYADRGVELLYEAPRRGKMAAINRAIPF
HHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHCHH
VRGEIIVFSDANNRYDANVIRELVAPFADADVGAVSGAKVIEKGDGALGESEGLYWRYES
HCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEHHHH
FVKKQESKLAGCTAVAGEVLAIRSDLFESPPDEIINDDTHMGMRIIARGFRIHYAPQARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCEEEECCCCCH
HERVSQSAQDEIARRARIFAGRYQAITYARSLWPFRRPLALWQLLSHQTLRTLVAVNMVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVMNILAVLSPSKAKSHKLLRLAAPFNWLLLIFQIVFYTMAWLGGRVDSNSKLGKVVYI
HHHHHHHHHHCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
PTFLVNSNWAGLIGLYRFVRRRQTTLWQRVGRRTN
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]