Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900075

Identifier: 159900075

GI number: 159900075

Start: 4475096

End: 4475659

Strand: Reverse

Name: 159900075

Synonym: Haur_3558

Alternate gene names: NA

Gene position: 4475659-4475096 (Counterclockwise)

Preceding gene: 159900076

Following gene: 159900073

Centisome position: 70.52

GC content: 45.74

Gene sequence:

>564_bases
ATGCGCTATTGGTGGTTGCTCATAGTGCTGATTGGCTGCATCCAAACCGATCAAACTCCACCCGCAGCCAATCAACTTAC
AAGCTATCGTTTATATTTTTTTGAGCATAAAGTCCTTAGCCAACAGAAAGATGCCCATATTGCAGCCAATCAGGAGTGGA
ATATCTTACGTGATCCCGACCTCTCACAAGCCAGCTATGTACTATCTGATAGCGCTATCGTTGAATATAATTGGCCGAAA
CAGACCTTAGTGCTGCAAAACCCTTGGGCTGAAGGCAATCAAAAAACGCCACTTTGGATGTCAGAAGGCACAACCTTAGT
TGTATTCAATGGACAGATTATTCGCGCCTATCAGCGAGAGCTAAGCATTACCAGCAAATATATTGCACCAGAAACTGCCG
TGATGTATCACGAACTGCAAGCAAATGTGGGTGATACAACCAAGCTTAGCTATCGCTTGATGCAAACAGGCGCAACTTCG
CCAGCTGCGATTGTCAGTGACGATGGAGCGATGGCCGAAGCCGTCAAGCAGCATTTTCGCCAGCTCGGTAAATTAGTTGA
ATAA

Upstream 100 bases:

>100_bases
GCCACAATCGCAATTTTTAGCAGCTGATCCGACTATCACCGAAGCCGTCAAGCAGCATTTGCGCGAAATTGGAAAGTTGG
TTGAGTAAGGGATTCTGACC

Downstream 100 bases:

>100_bases
GGGAAGTTCATGCCCTCACCTCAACCCCTCGCCCACTGAGCGGGAGTAACATTTATGATAGAGGATTTCCCCCTCGCCTC
GCTGGGCGGGAGAGGGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPDLSQASYVLSDSAIVEYNWPK
QTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRELSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATS
PAAIVSDDGAMAEAVKQHFRQLGKLVE

Sequences:

>Translated_187_residues
MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPDLSQASYVLSDSAIVEYNWPK
QTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRELSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATS
PAAIVSDDGAMAEAVKQHFRQLGKLVE
>Mature_187_residues
MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPDLSQASYVLSDSAIVEYNWPK
QTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRELSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATS
PAAIVSDDGAMAEAVKQHFRQLGKLVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21250; Mature: 21250

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPD
CHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHEEEHHHHHHCCCCCEEECCCCCCEECCCC
LSQASYVLSDSAIVEYNWPKQTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRE
CCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHH
LSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATSPAAIVSDDGAMAEAVKQHFR
HHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHHH
QLGKLVE
HHHHHCC
>Mature Secondary Structure
MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPD
CHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHEEEHHHHHHCCCCCEEECCCCCCEECCCC
LSQASYVLSDSAIVEYNWPKQTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRE
CCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHH
LSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATSPAAIVSDDGAMAEAVKQHFR
HHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHHH
QLGKLVE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA