| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900073
Identifier: 159900073
GI number: 159900073
Start: 4471970
End: 4472821
Strand: Reverse
Name: 159900073
Synonym: Haur_3556
Alternate gene names: NA
Gene position: 4472821-4471970 (Counterclockwise)
Preceding gene: 159900075
Following gene: 159900072
Centisome position: 70.48
GC content: 42.84
Gene sequence:
>852_bases ATGAATCCATCAATCATTCACTTGCGCATTTCGCGGAGTTTAATTGTTTTGGTCGGCCTAACTTGGTCGCTTGGCTTGAT GTTTGGGCTGGGCTTTTTGAGCAACTATACCTTTTGGGCCGCAGCCTGTTTTACTGGGTGGTGGCTCGCGCTATTGGTGC GCTTTGGCTTATTAACGTGGCAACATGTTTATCTGAGCGATCAGGGCATTCGGGTGAAAAATTACACTGGCGATTATACT TTTGCTTGGAATACGCTGCATGCGATTGAATTTGTGACTGAGCCAGCAGCACCACGTTTTATGGATCGCGATTTGAGCTA TCTCTGGGCAACCTACGCCGTGCGTTTTTCTGATGCCCAACGCTCAATCATTGTGCATACGCGCTTTACTGAGCATGATC GCACACTATTTAAAACCAAGCTAGCGCATTATATTCAACACTATGCAATTCCCAATAAAACTATCGATACCCTTGATTAT CCAGTGATCTATCCAGAGCGATTAAGCATTTGGCAAAAGCTGATGCGACTGCATCGACCACCACTAATTAAGTCACTTGA AATTTTGCGTAGGTTTTGTTGGTGTTTGTTGGCAATTGCAATGATTTATGCAGCTGTAACCGAACAAGAATTTTTTGTTG CACTGACTGCATTTGCAATCTATCAAGTGCTCAAATTAGGCTTAGCACTGTTGCCAAATGCGATTAAGCAACCTGACCTG TTGATTAAGCCACAAGAATCGGCCTTGTATGTGCCAAAATTGGTTGATAAAACCCTATTTGCCCGCTTATTGGGATTCTA TGGATTAATCGTTGTGTTGATTTCGATATATTATGGGATTGTAGGTTTCTAA
Upstream 100 bases:
>100_bases TGGCGGGTGCTAACGAGGATGATTTCTGTATCCTAGCTCCTCAACGGTGCGTATTAACCGCTGGTACACTTAATCAATAT TTTGAGAAGCGAGAACTTCA
Downstream 100 bases:
>100_bases TGACCTATAAACACAGAAAAACTATCTATTTCCCACTGGTTATTATGGTAATTTTGATAAATATCGCTAGCATCTTGCTG ATTAATAATGAATTTGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTWQHVYLSDQGIRVKNYTGDYT FAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQRSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDY PVIYPERLSIWQKLMRLHRPPLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF
Sequences:
>Translated_283_residues MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTWQHVYLSDQGIRVKNYTGDYT FAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQRSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDY PVIYPERLSIWQKLMRLHRPPLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF >Mature_283_residues MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTWQHVYLSDQGIRVKNYTGDYT FAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQRSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDY PVIYPERLSIWQKLMRLHRPPLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32779; Mature: 32779
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTW CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHVYLSDQGIRVKNYTGDYTFAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQ HHEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC RSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDYPVIYPERLSIWQKLMRLHRP CEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC PLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCE LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTW CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHVYLSDQGIRVKNYTGDYTFAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQ HHEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC RSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDYPVIYPERLSIWQKLMRLHRP CEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC PLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCE LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA