Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900073

Identifier: 159900073

GI number: 159900073

Start: 4471970

End: 4472821

Strand: Reverse

Name: 159900073

Synonym: Haur_3556

Alternate gene names: NA

Gene position: 4472821-4471970 (Counterclockwise)

Preceding gene: 159900075

Following gene: 159900072

Centisome position: 70.48

GC content: 42.84

Gene sequence:

>852_bases
ATGAATCCATCAATCATTCACTTGCGCATTTCGCGGAGTTTAATTGTTTTGGTCGGCCTAACTTGGTCGCTTGGCTTGAT
GTTTGGGCTGGGCTTTTTGAGCAACTATACCTTTTGGGCCGCAGCCTGTTTTACTGGGTGGTGGCTCGCGCTATTGGTGC
GCTTTGGCTTATTAACGTGGCAACATGTTTATCTGAGCGATCAGGGCATTCGGGTGAAAAATTACACTGGCGATTATACT
TTTGCTTGGAATACGCTGCATGCGATTGAATTTGTGACTGAGCCAGCAGCACCACGTTTTATGGATCGCGATTTGAGCTA
TCTCTGGGCAACCTACGCCGTGCGTTTTTCTGATGCCCAACGCTCAATCATTGTGCATACGCGCTTTACTGAGCATGATC
GCACACTATTTAAAACCAAGCTAGCGCATTATATTCAACACTATGCAATTCCCAATAAAACTATCGATACCCTTGATTAT
CCAGTGATCTATCCAGAGCGATTAAGCATTTGGCAAAAGCTGATGCGACTGCATCGACCACCACTAATTAAGTCACTTGA
AATTTTGCGTAGGTTTTGTTGGTGTTTGTTGGCAATTGCAATGATTTATGCAGCTGTAACCGAACAAGAATTTTTTGTTG
CACTGACTGCATTTGCAATCTATCAAGTGCTCAAATTAGGCTTAGCACTGTTGCCAAATGCGATTAAGCAACCTGACCTG
TTGATTAAGCCACAAGAATCGGCCTTGTATGTGCCAAAATTGGTTGATAAAACCCTATTTGCCCGCTTATTGGGATTCTA
TGGATTAATCGTTGTGTTGATTTCGATATATTATGGGATTGTAGGTTTCTAA

Upstream 100 bases:

>100_bases
TGGCGGGTGCTAACGAGGATGATTTCTGTATCCTAGCTCCTCAACGGTGCGTATTAACCGCTGGTACACTTAATCAATAT
TTTGAGAAGCGAGAACTTCA

Downstream 100 bases:

>100_bases
TGACCTATAAACACAGAAAAACTATCTATTTCCCACTGGTTATTATGGTAATTTTGATAAATATCGCTAGCATCTTGCTG
ATTAATAATGAATTTGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTWQHVYLSDQGIRVKNYTGDYT
FAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQRSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDY
PVIYPERLSIWQKLMRLHRPPLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL
LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF

Sequences:

>Translated_283_residues
MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTWQHVYLSDQGIRVKNYTGDYT
FAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQRSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDY
PVIYPERLSIWQKLMRLHRPPLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL
LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF
>Mature_283_residues
MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTWQHVYLSDQGIRVKNYTGDYT
FAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQRSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDY
PVIYPERLSIWQKLMRLHRPPLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL
LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32779; Mature: 32779

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTW
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHVYLSDQGIRVKNYTGDYTFAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQ
HHEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
RSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDYPVIYPERLSIWQKLMRLHRP
CEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC
PLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCE
LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPSIIHLRISRSLIVLVGLTWSLGLMFGLGFLSNYTFWAAACFTGWWLALLVRFGLLTW
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHVYLSDQGIRVKNYTGDYTFAWNTLHAIEFVTEPAAPRFMDRDLSYLWATYAVRFSDAQ
HHEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
RSIIVHTRFTEHDRTLFKTKLAHYIQHYAIPNKTIDTLDYPVIYPERLSIWQKLMRLHRP
CEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC
PLIKSLEILRRFCWCLLAIAMIYAAVTEQEFFVALTAFAIYQVLKLGLALLPNAIKQPDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCE
LIKPQESALYVPKLVDKTLFARLLGFYGLIVVLISIYYGIVGF
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA