| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900076
Identifier: 159900076
GI number: 159900076
Start: 4475672
End: 4476247
Strand: Reverse
Name: 159900076
Synonym: Haur_3559
Alternate gene names: NA
Gene position: 4476247-4475672 (Counterclockwise)
Preceding gene: 159900077
Following gene: 159900075
Centisome position: 70.53
GC content: 46.35
Gene sequence:
>576_bases ATGGCATGGTTTCGCTATTGGTGGTTGCTCTTATTGCTGATTGGCTGCATCCAAACCGATCAACCTCTACCCACAGCCAA TCAGTTTGCGATTTATATCTTCGATCAAGATGCCGTACCGGGACTTGGATCAAGCGCCGAAACTGCATGGCCGATTTTAC AAGCTGTGCCTTTAGCACAAAGTGCGTTTACCGTAACCGAAGATCTATTGCTCAGTTATCATTGGCAAACCCAAACCATC ACCTTTACTAATCCATGGGGGCAAACTGATCGTGATGCGCCAGGTTATATGTGGAATGGTGGAGGTTCATTTGTCGTAAT CTATAACGGGCAACGCTTGTTTGGAGGCAAGGTCGTGGCCGCAATTAGCCCTCGGCGATTTGACTACCCAGCGATGGCCT TATCAAATGACTATATTCTGATGGAGAATCCAGAATTACAAGGCAAGTTGGTCTATTCATTTCATCCAAAATCGGCAGTT ATGTACCCGCCACAATCGCAATTTTTAGCAGCTGATCCGACTATCACCGAAGCCGTCAAGCAGCATTTGCGCGAAATTGG AAAGTTGGTTGAGTAA
Upstream 100 bases:
>100_bases TGCTCCCCATAGTTTTCCCAACCCCGATCCAACAATCGGCGAGGCAGTCAAAGAGCATTTGCGCCAGCTTGGCAAATTGG TTGAGTAAGGGATTCTGACC
Downstream 100 bases:
>100_bases GGGATTCTGACCATGCGCTATTGGTGGTTGCTCATAGTGCTGATTGGCTGCATCCAAACCGATCAAACTCCACCCGCAGC CAATCAACTTACAAGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQSAFTVTEDLLLSYHWQTQTI TFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVAAISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAV MYPPQSQFLAADPTITEAVKQHLREIGKLVE
Sequences:
>Translated_191_residues MAWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQSAFTVTEDLLLSYHWQTQTI TFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVAAISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAV MYPPQSQFLAADPTITEAVKQHLREIGKLVE >Mature_190_residues AWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQSAFTVTEDLLLSYHWQTQTIT FTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVAAISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAVM YPPQSQFLAADPTITEAVKQHLREIGKLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21492; Mature: 21361
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQ CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCH SAFTVTEDLLLSYHWQTQTITFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVA HHHHHHHHHHEEEEECEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCEEECCEEEE AISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAVMYPPQSQFLAADPTITEAVK EECCCCCCCCCEEECCCEEEEECCCCCEEEEEEECCCCEEECCCCCCEEECCCHHHHHHH QHLREIGKLVE HHHHHHHHHCC >Mature Secondary Structure AWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQ CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCH SAFTVTEDLLLSYHWQTQTITFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVA HHHHHHHHHHEEEEECEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCEEECCEEEE AISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAVMYPPQSQFLAADPTITEAVK EECCCCCCCCCEEECCCEEEEECCCCCEEEEEEECCCCEEECCCCCCEEECCCHHHHHHH QHLREIGKLVE HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA