Click here to switch to the map view.

The map label for this gene is 159899914

Identifier: 159899914

GI number: 159899914

Start: 4279739

End: 4280203

Strand: Reverse

Name: 159899914

Synonym: Haur_3397

Alternate gene names: NA

Gene position: 4280203-4279739 (Counterclockwise)

Preceding gene: 159899915

Following gene: 159899911

Centisome position: 67.44

GC content: 50.75

Gene sequence:

>465_bases
ATGCAAGTTTACGAACGTGCTGGTTTGACGATTGCTGGCTTGGCGACGCGCACCACCAATCAGGCCGAGGCTGATCCGCG
CACGGGCTTGATTGGCCCGCTCTATCAGCGCTTTTTTGGCGAAAACATCAGCCAACAGCTCGCTAACGCCGATTTAACCA
GTCGCTATGGGGTGTATACCAACTATGCCAGCGATCATCAAGGCGAATATGATCTGATTGTCGGCCATGCTGTAAGTAGC
GATCAACCACAGCCTGACGGTTTGATCCAGATTACGATTCCAGCTCAGCGCTATCTCCGTTGGCAGGGCACAATTGCCCA
ACCCAGCGATGTGATTGGCATGTGGATGCACATTTGGGAGTATTTTAGCCAACCTCAGCTATATCAACGGAGCTATACCG
CCGATTTTGAATACTATGATTTTGCCCAGCCCGATCAGGCCGAAATTTGGATTGCAATTCAGTAA

Upstream 100 bases:

>100_bases
AAACCACGGCTAGGCCAAGCGCTTAGCTGTGGTTTTTTTAACTTGAAAATAGAACAAATGTTTTATATAATCAGCTGTTG
TGTTTGTATGAGGAATGTGT

Downstream 100 bases:

>100_bases
AGTCTCCTTATCTTTTGAGTAAAATTTAGAACCGCAAGCATCCGAAAATTGTCCTTTAGGGGTGCAGGGGGATGAAAACA
CCCTGCCTTCCCCGCCTTGA

Product: transcription activator effector binding

Products: NA

Alternate protein names: Transcription Activator; Orphan Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MQVYERAGLTIAGLATRTTNQAEADPRTGLIGPLYQRFFGENISQQLANADLTSRYGVYTNYASDHQGEYDLIVGHAVSS
DQPQPDGLIQITIPAQRYLRWQGTIAQPSDVIGMWMHIWEYFSQPQLYQRSYTADFEYYDFAQPDQAEIWIAIQ

Sequences:

>Translated_154_residues
MQVYERAGLTIAGLATRTTNQAEADPRTGLIGPLYQRFFGENISQQLANADLTSRYGVYTNYASDHQGEYDLIVGHAVSS
DQPQPDGLIQITIPAQRYLRWQGTIAQPSDVIGMWMHIWEYFSQPQLYQRSYTADFEYYDFAQPDQAEIWIAIQ
>Mature_154_residues
MQVYERAGLTIAGLATRTTNQAEADPRTGLIGPLYQRFFGENISQQLANADLTSRYGVYTNYASDHQGEYDLIVGHAVSS
DQPQPDGLIQITIPAQRYLRWQGTIAQPSDVIGMWMHIWEYFSQPQLYQRSYTADFEYYDFAQPDQAEIWIAIQ

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17606; Mature: 17606

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVYERAGLTIAGLATRTTNQAEADPRTGLIGPLYQRFFGENISQQLANADLTSRYGVYT
CCCCHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEE
NYASDHQGEYDLIVGHAVSSDQPQPDGLIQITIPAQRYLRWQGTIAQPSDVIGMWMHIWE
CCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECHHHEEEECCCCCCCHHHHHHHHHHHH
YFSQPQLYQRSYTADFEYYDFAQPDQAEIWIAIQ
HHCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MQVYERAGLTIAGLATRTTNQAEADPRTGLIGPLYQRFFGENISQQLANADLTSRYGVYT
CCCCHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEE
NYASDHQGEYDLIVGHAVSSDQPQPDGLIQITIPAQRYLRWQGTIAQPSDVIGMWMHIWE
CCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECHHHEEEECCCCCCCHHHHHHHHHHHH
YFSQPQLYQRSYTADFEYYDFAQPDQAEIWIAIQ
HHCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA