| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899757
Identifier: 159899757
GI number: 159899757
Start: 4100897
End: 4101256
Strand: Reverse
Name: 159899757
Synonym: Haur_3239
Alternate gene names: NA
Gene position: 4101256-4100897 (Counterclockwise)
Preceding gene: 159899758
Following gene: 159899756
Centisome position: 64.62
GC content: 47.5
Gene sequence:
>360_bases ATGAAATTTGGTAAATTGTTGCGCTTCGGTATCATTGCTGGTGCAGGAGCCTTGGTTTATCGGGTTTATAAACAATATAA GGCGGATCAAGCATTTGAGTTGGCTCCGGTCAGCAATTTAGGCTCAAACACCACCGCCGTCAGCGCCAGCAGCACCAAAC GATCAATCAGCCCCGAGTTGCTGGAAATCTTGGCTTGCCCAGTCGATAAAAAACCAGTCGAATTGTATACCGATGCAAGC GGCAAAGAATGGCTGCTCAACCCACGCAACGGTTATCGCTACCCAATTGAAGATGGGATTCCGATTATGTTGATCGATGA AGGCGAAAAGCATAAAGATACCAGCCTGATTCGCGCCTAA
Upstream 100 bases:
>100_bases GCATCGAAACCGCTGGCATCAAAGATCTAACCAAAATAACTCAATTTGTGAAAACCGCGCAGCAAGCCTTGGATGCGCTG CGTGTTGCTAGGAGGAATTC
Downstream 100 bases:
>100_bases TTTGTCCAGCGTGGAACCCTATTACGGAAGGGAAGCCCTCCGGGCTTCCTTTTGTTGTTACTTGGAGTCTGGATCATGCC AAACCTCGCTGAACTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPELLEILACPVDKKPVELYTDAS GKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA
Sequences:
>Translated_119_residues MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPELLEILACPVDKKPVELYTDAS GKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA >Mature_119_residues MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPELLEILACPVDKKPVELYTDAS GKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA
Specific function: Unknown
COG id: COG2835
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13131; Mature: 13131
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPEL CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCHHH LEILACPVDKKPVELYTDASGKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA HHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPEL CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCHHH LEILACPVDKKPVELYTDASGKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA HHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA