| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899756
Identifier: 159899756
GI number: 159899756
Start: 4100105
End: 4100821
Strand: Reverse
Name: 159899756
Synonym: Haur_3238
Alternate gene names: NA
Gene position: 4100821-4100105 (Counterclockwise)
Preceding gene: 159899757
Following gene: 159899751
Centisome position: 64.61
GC content: 55.37
Gene sequence:
>717_bases ATGCCAAACCTCGCTGAACTTTCGACCTTCTTACAAACCATCTTAGAGACCGAGTATTTTCCAAGTGAAGAACGGGGTAC GATCTATATTTCGTCGGTGCGGCCTATTCGCCGCATGGGCTTTGCGCTCGATCCATGGCCAACCTTGCCATCATGGCTTG AACACGAAGATCTCGACGCGATCTTTTTACATCGCCCGCAACAACTTGATCGTGATACGGTGCCGCCAACCCGTGGGGTG CTCTATGCTGGCGCACCATTCGACGAGCGCTTGACGATTGGCTTTGTGCCACGCATGGCTGAAGTTTTGGGCTTGCGCGG GCGCTCACCTATGGCCGATAAAAGTGGCCGTCCTTTGGGCATGGTCGGCGATCTGCCCAAGCCTGTAACGACTGCCGAAT GGCGACGACTTGTCATGGATATGTATGGCGGGGTCGATGAGGTTTGGGAAAATAATGTTCAATCGATCCGTAAGGTTGCG ATTGTCAACCAAATTACCCCAACCCTCGTGCAAGAGGCCGCAAATCGTGGCGCTCAGGCCTTCCTCACGCCAATTCTGCG CGAATCAGCCCAAGCTAGCTGTCGCGCCAACAATATGGCTGCCTTCAGCACTGGCATCAAACGAGCTGAACATTGGGGCT TACGCACCCTCGCAGGCATGATCCGCGAGCGCTGGGCGGGCGTGCGCACGGCGATTTTTGAAGATCGCGGCCAGTAA
Upstream 100 bases:
>100_bases AGATACCAGCCTGATTCGCGCCTAATTTGTCCAGCGTGGAACCCTATTACGGAAGGGAAGCCCTCCGGGCTTCCTTTTGT TGTTACTTGGAGTCTGGATC
Downstream 100 bases:
>100_bases GATTTTTGAAATGTGAATCTTTTCATGGCCCTCACCCCAACCCCTCGCCCACTGCGGCGGGCGAGGGGCGTTCCAATCGT CATGATTCCCCCGCTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPNLAELSTFLQTILETEYFPSEERGTIYISSVRPIRRMGFALDPWPTLPSWLEHEDLDAIFLHRPQQLDRDTVPPTRGV LYAGAPFDERLTIGFVPRMAEVLGLRGRSPMADKSGRPLGMVGDLPKPVTTAEWRRLVMDMYGGVDEVWENNVQSIRKVA IVNQITPTLVQEAANRGAQAFLTPILRESAQASCRANNMAAFSTGIKRAEHWGLRTLAGMIRERWAGVRTAIFEDRGQ
Sequences:
>Translated_238_residues MPNLAELSTFLQTILETEYFPSEERGTIYISSVRPIRRMGFALDPWPTLPSWLEHEDLDAIFLHRPQQLDRDTVPPTRGV LYAGAPFDERLTIGFVPRMAEVLGLRGRSPMADKSGRPLGMVGDLPKPVTTAEWRRLVMDMYGGVDEVWENNVQSIRKVA IVNQITPTLVQEAANRGAQAFLTPILRESAQASCRANNMAAFSTGIKRAEHWGLRTLAGMIRERWAGVRTAIFEDRGQ >Mature_237_residues PNLAELSTFLQTILETEYFPSEERGTIYISSVRPIRRMGFALDPWPTLPSWLEHEDLDAIFLHRPQQLDRDTVPPTRGVL YAGAPFDERLTIGFVPRMAEVLGLRGRSPMADKSGRPLGMVGDLPKPVTTAEWRRLVMDMYGGVDEVWENNVQSIRKVAI VNQITPTLVQEAANRGAQAFLTPILRESAQASCRANNMAAFSTGIKRAEHWGLRTLAGMIRERWAGVRTAIFEDRGQ
Specific function: Unknown
COG id: COG0327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26747; Mature: 26616
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLAELSTFLQTILETEYFPSEERGTIYISSVRPIRRMGFALDPWPTLPSWLEHEDLDA CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCHHHHCCCCCCH IFLHRPQQLDRDTVPPTRGVLYAGAPFDERLTIGFVPRMAEVLGLRGRSPMADKSGRPLG HHHCCCHHCCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCC MVGDLPKPVTTAEWRRLVMDMYGGVDEVWENNVQSIRKVAIVNQITPTLVQEAANRGAQA CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FLTPILRESAQASCRANNMAAFSTGIKRAEHWGLRTLAGMIRERWAGVRTAIFEDRGQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PNLAELSTFLQTILETEYFPSEERGTIYISSVRPIRRMGFALDPWPTLPSWLEHEDLDA CCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCHHHHCCCCCCH IFLHRPQQLDRDTVPPTRGVLYAGAPFDERLTIGFVPRMAEVLGLRGRSPMADKSGRPLG HHHCCCHHCCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCC MVGDLPKPVTTAEWRRLVMDMYGGVDEVWENNVQSIRKVAIVNQITPTLVQEAANRGAQA CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FLTPILRESAQASCRANNMAAFSTGIKRAEHWGLRTLAGMIRERWAGVRTAIFEDRGQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA