| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899653
Identifier: 159899653
GI number: 159899653
Start: 3962961
End: 3963977
Strand: Reverse
Name: 159899653
Synonym: Haur_3135
Alternate gene names: NA
Gene position: 3963977-3962961 (Counterclockwise)
Preceding gene: 159899654
Following gene: 159899639
Centisome position: 62.46
GC content: 48.87
Gene sequence:
>1017_bases ATGAAAAAACGAATTATCAATGGGCTTTTGACAGCCTTGGGTCCAGCGATCTTGATTTGGTTTCTGGCTACCAACGATCT TGCTAGCATTTGGAATGTGATTCGCACCACTGATCCTTGGTTGTTTGGTTGGTCGGTGGTCTTGGTATTGCCGTTTCTTT ATTCCAAGGGCTGGCGCTGGCGCTTGATCTTGCAAGGCTGGAATATTGAAATTAGCCCATGGTTTGCTTCATTGCTTTAT ACCTTGGGCATTTTCGTTGGATCAGTTACGCCTGGGCAGGGCGGCGATGCGGTCAAGGCTTGGTATTTGCGTCGCGAAGG CCATCCACTGGGGCCAAGTTTGCTTTCAATCGTGGTTGATCGCTTCTTCGATGTGGCGATTATGGGGATTATTGCTGGCT CAGGCTTGTATTTCTACCGTACCTTTTTGCCTGGCAATGTGCAACTTTTGATTGTGGCTTCGCTCTTGGGCGTGGTGGTT GGTGTGGCGATTTTGGCGAGCGCTGGTTTGCGGCGTTGGTTTACGACCAAAGTTGTGCCAGTGGTTGTGCCTGCCAAATT ACGCCAACTCGCGGTCAAAGCTGGCCTCAAAGATCGCGTGTTGCATATGCCGCTCAGCCGGATTGTGACCTTGGTTTTGT TCTCATTCGTGACCTTGGGCTGGACATTTATTCGACTGTATTTGCTGTTTTTGGCAACAGGGGTCAAGATTGATATTGGC CCGTATATGGCCATGATTGCGATTATCTCATTGGTCAGCGTGATTTCGATTGCTGGCATTGGCATTCGCGATGTGGTGAT GATTTTGATTATGACCAACTTAGCTCAAACTGGCCAGATGGTGCCTGTGGCAGGTGGTAGCTTCACCAGCGACCAAGCGA CCAGTTTGGCATTAGGCATTTCAACCCTGTTTTTGGTGTTGAATGTGATTAATGTGATGCTGGGCTTTTTAGTTTCGTTG CGCTACCCGCTGGGCGATGCTTTACTCAAAACCGATTTAGCCACGGTTGAAGAATAG
Upstream 100 bases:
>100_bases CGCCGACGGCGCTGTTTTGCTTGATTGCGACCATGTTTTTCTTTTGTTTTGGCTTGTTGGCCGAAACGATTGCAGCGCTG CGCTTTGAACGGATTCGCCA
Downstream 100 bases:
>100_bases TTGTGAGGAACTAGGGAGCAGAATTTTAGAACCGCGAAGAACACGAAGATCGCTAAGGCTGTTTTGTCATAGATTAGTAT GGCTGGATTTTGAACCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKKRIINGLLTALGPAILIWFLATNDLASIWNVIRTTDPWLFGWSVVLVLPFLYSKGWRWRLILQGWNIEISPWFASLLY TLGIFVGSVTPGQGGDAVKAWYLRREGHPLGPSLLSIVVDRFFDVAIMGIIAGSGLYFYRTFLPGNVQLLIVASLLGVVV GVAILASAGLRRWFTTKVVPVVVPAKLRQLAVKAGLKDRVLHMPLSRIVTLVLFSFVTLGWTFIRLYLLFLATGVKIDIG PYMAMIAIISLVSVISIAGIGIRDVVMILIMTNLAQTGQMVPVAGGSFTSDQATSLALGISTLFLVLNVINVMLGFLVSL RYPLGDALLKTDLATVEE
Sequences:
>Translated_338_residues MKKRIINGLLTALGPAILIWFLATNDLASIWNVIRTTDPWLFGWSVVLVLPFLYSKGWRWRLILQGWNIEISPWFASLLY TLGIFVGSVTPGQGGDAVKAWYLRREGHPLGPSLLSIVVDRFFDVAIMGIIAGSGLYFYRTFLPGNVQLLIVASLLGVVV GVAILASAGLRRWFTTKVVPVVVPAKLRQLAVKAGLKDRVLHMPLSRIVTLVLFSFVTLGWTFIRLYLLFLATGVKIDIG PYMAMIAIISLVSVISIAGIGIRDVVMILIMTNLAQTGQMVPVAGGSFTSDQATSLALGISTLFLVLNVINVMLGFLVSL RYPLGDALLKTDLATVEE >Mature_338_residues MKKRIINGLLTALGPAILIWFLATNDLASIWNVIRTTDPWLFGWSVVLVLPFLYSKGWRWRLILQGWNIEISPWFASLLY TLGIFVGSVTPGQGGDAVKAWYLRREGHPLGPSLLSIVVDRFFDVAIMGIIAGSGLYFYRTFLPGNVQLLIVASLLGVVV GVAILASAGLRRWFTTKVVPVVVPAKLRQLAVKAGLKDRVLHMPLSRIVTLVLFSFVTLGWTFIRLYLLFLATGVKIDIG PYMAMIAIISLVSVISIAGIGIRDVVMILIMTNLAQTGQMVPVAGGSFTSDQATSLALGISTLFLVLNVINVMLGFLVSL RYPLGDALLKTDLATVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36915; Mature: 36915
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIINGLLTALGPAILIWFLATNDLASIWNVIRTTDPWLFGWSVVLVLPFLYSKGWRW CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE RLILQGWNIEISPWFASLLYTLGIFVGSVTPGQGGDAVKAWYLRREGHPLGPSLLSIVVD EEEEECCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH RFFDVAIMGIIAGSGLYFYRTFLPGNVQLLIVASLLGVVVGVAILASAGLRRWFTTKVVP HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVPAKLRQLAVKAGLKDRVLHMPLSRIVTLVLFSFVTLGWTFIRLYLLFLATGVKIDIG EECHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECH PYMAMIAIISLVSVISIAGIGIRDVVMILIMTNLAQTGQMVPVAGGSFTSDQATSLALGI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH STLFLVLNVINVMLGFLVSLRYPLGDALLKTDLATVEE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKKRIINGLLTALGPAILIWFLATNDLASIWNVIRTTDPWLFGWSVVLVLPFLYSKGWRW CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE RLILQGWNIEISPWFASLLYTLGIFVGSVTPGQGGDAVKAWYLRREGHPLGPSLLSIVVD EEEEECCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH RFFDVAIMGIIAGSGLYFYRTFLPGNVQLLIVASLLGVVVGVAILASAGLRRWFTTKVVP HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVPAKLRQLAVKAGLKDRVLHMPLSRIVTLVLFSFVTLGWTFIRLYLLFLATGVKIDIG EECHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECH PYMAMIAIISLVSVISIAGIGIRDVVMILIMTNLAQTGQMVPVAGGSFTSDQATSLALGI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH STLFLVLNVINVMLGFLVSLRYPLGDALLKTDLATVEE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA