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The map label for this gene is arnC [H]

Identifier: 159899654

GI number: 159899654

Start: 3963974

End: 3964891

Strand: Reverse

Name: arnC [H]

Synonym: Haur_3136

Alternate gene names: 159899654

Gene position: 3964891-3963974 (Counterclockwise)

Preceding gene: 159899655

Following gene: 159899653

Centisome position: 62.47

GC content: 50.22

Gene sequence:

>918_bases
GTGGAACGCACAACGCTTGCAAGTGCTCTAACCACAACGTCATCACCGTTTCCTTGGACGGTGAGCATTGTGATTCCAGC
CTTTAATGAAGCCGCAACAATTGGCGGGGTGGTGCACGAGGTTCGCACACGCTACCCTGAACTTGAAATTATCGTGGTTG
ATGATCATTCTGCTGATGCAACCGTGGAAATTGCCACCGCTGCCGGAGCACGCGTGATCACCCGTCCTTATAACATTGGC
AACGGTGCTGGGGTCAAAACTGGTGTTCGGGCTGCAACTGGCGAAATCGTGATTATTATGGATGGCGATGGCCAGCACAA
CCCCGCCGACATCGAACGCTTATTGAGCTATATCGGCGATTACGATATGGTGATTGGCGCTCGTTCGCGCTCAGGCCAAG
AAAATTGGCTGCGTTGGTTGGGCAATAGCGCCTTGAATGGGCTTGGCTCGTATCTGACAGGCATGGAAATGCAAGATTTG
ACTTCAGGTTTTCGGGCGTTTCGCCGCTCAATTTTGCTTGATTATATTCATCTCTTGCCGAACCAATTTTCGTGGCCAAC
CACCAGCGCCTTGGCTTTTGCCAAAGCTGGCTACCACGTGCGCTTCGAGCCAATCGCCATGCAACGCCGCCAAGGTGGTC
GCTCTAAGCAAAAGCTGCTGAAAAATGGCTTTAAATTTACAATCATCATCCTGCGGATTATCAGTTTGTTTAATCCGATT
CGGGTGTTTATCCCGGTCAGCGGCTTTTTCTTTGTGCTATGTATTATTTCGTATGTGTTGGGAGCGCTGAACGATAATAA
TTGGTTGCATCTGCCGCCGACGGCGCTGTTTTGCTTGATTGCGACCATGTTTTTCTTTTGTTTTGGCTTGTTGGCCGAAA
CGATTGCAGCGCTGCGCTTTGAACGGATTCGCCAATGA

Upstream 100 bases:

>100_bases
AACTCCAAGCGATTGTTGCGAATGCGCTGCAATTGTGGCCGCAAACCATGCGTTTGCGCTAGGCTAGTTTCTGGTACAAT
GCCTCTCCGGAGGTTCAACT

Downstream 100 bases:

>100_bases
AAAAACGAATTATCAATGGGCTTTTGACAGCCTTGGGTCCAGCGATCTTGATTTGGTTTCTGGCTACCAACGATCTTGCT
AGCATTTGGAATGTGATTCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MERTTLASALTTTSSPFPWTVSIVIPAFNEAATIGGVVHEVRTRYPELEIIVVDDHSADATVEIATAAGARVITRPYNIG
NGAGVKTGVRAATGEIVIIMDGDGQHNPADIERLLSYIGDYDMVIGARSRSGQENWLRWLGNSALNGLGSYLTGMEMQDL
TSGFRAFRRSILLDYIHLLPNQFSWPTTSALAFAKAGYHVRFEPIAMQRRQGGRSKQKLLKNGFKFTIIILRIISLFNPI
RVFIPVSGFFFVLCIISYVLGALNDNNWLHLPPTALFCLIATMFFFCFGLLAETIAALRFERIRQ

Sequences:

>Translated_305_residues
MERTTLASALTTTSSPFPWTVSIVIPAFNEAATIGGVVHEVRTRYPELEIIVVDDHSADATVEIATAAGARVITRPYNIG
NGAGVKTGVRAATGEIVIIMDGDGQHNPADIERLLSYIGDYDMVIGARSRSGQENWLRWLGNSALNGLGSYLTGMEMQDL
TSGFRAFRRSILLDYIHLLPNQFSWPTTSALAFAKAGYHVRFEPIAMQRRQGGRSKQKLLKNGFKFTIIILRIISLFNPI
RVFIPVSGFFFVLCIISYVLGALNDNNWLHLPPTALFCLIATMFFFCFGLLAETIAALRFERIRQ
>Mature_305_residues
MERTTLASALTTTSSPFPWTVSIVIPAFNEAATIGGVVHEVRTRYPELEIIVVDDHSADATVEIATAAGARVITRPYNIG
NGAGVKTGVRAATGEIVIIMDGDGQHNPADIERLLSYIGDYDMVIGARSRSGQENWLRWLGNSALNGLGSYLTGMEMQDL
TSGFRAFRRSILLDYIHLLPNQFSWPTTSALAFAKAGYHVRFEPIAMQRRQGGRSKQKLLKNGFKFTIIILRIISLFNPI
RVFIPVSGFFFVLCIISYVLGALNDNNWLHLPPTALFCLIATMFFFCFGLLAETIAALRFERIRQ

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788588, Length=298, Percent_Identity=25.8389261744966, Blast_Score=85, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71999402, Length=220, Percent_Identity=28.1818181818182, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24585265, Length=213, Percent_Identity=28.169014084507, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 33809; Mature: 33809

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTTLASALTTTSSPFPWTVSIVIPAFNEAATIGGVVHEVRTRYPELEIIVVDDHSADA
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
TVEIATAAGARVITRPYNIGNGAGVKTGVRAATGEIVIIMDGDGQHNPADIERLLSYIGD
EEEEEECCCCEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCC
YDMVIGARSRSGQENWLRWLGNSALNGLGSYLTGMEMQDLTSGFRAFRRSILLDYIHLLP
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
NQFSWPTTSALAFAKAGYHVRFEPIAMQRRQGGRSKQKLLKNGFKFTIIILRIISLFNPI
CCCCCCCHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC
RVFIPVSGFFFVLCIISYVLGALNDNNWLHLPPTALFCLIATMFFFCFGLLAETIAALRF
EEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIRQ
HHHCC
>Mature Secondary Structure
MERTTLASALTTTSSPFPWTVSIVIPAFNEAATIGGVVHEVRTRYPELEIIVVDDHSADA
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
TVEIATAAGARVITRPYNIGNGAGVKTGVRAATGEIVIIMDGDGQHNPADIERLLSYIGD
EEEEEECCCCEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCC
YDMVIGARSRSGQENWLRWLGNSALNGLGSYLTGMEMQDLTSGFRAFRRSILLDYIHLLP
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
NQFSWPTTSALAFAKAGYHVRFEPIAMQRRQGGRSKQKLLKNGFKFTIIILRIISLFNPI
CCCCCCCHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC
RVFIPVSGFFFVLCIISYVLGALNDNNWLHLPPTALFCLIATMFFFCFGLLAETIAALRF
EEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIRQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA