| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899527
Identifier: 159899527
GI number: 159899527
Start: 3799505
End: 3800119
Strand: Reverse
Name: 159899527
Synonym: Haur_3008
Alternate gene names: NA
Gene position: 3800119-3799505 (Counterclockwise)
Preceding gene: 159899528
Following gene: 159899525
Centisome position: 59.88
GC content: 48.94
Gene sequence:
>615_bases ATGTCTCAACCTCGTCGTGGTCGTCGCCAAGTAGGCCAAAAATCGCGTTTGCCATTGTTTTTTGGCATCGGAGCCGTGCT ATTGGTGATTGTGGTGATTGCCGTTGTGGTGCTTAATGGTGGTGAAGATAAAGTTGACAAGGTGACGGTTGCCGAAGGAA CGACAGCACCCTCAACGACTGGGGTTGTTCAAGAATTGCCCGATGAAGGCCAACAACACGTTGCCGATGGCGAAAAAGTC GCCTACAAGCAGAATCCCCCAACTTCTGGCAGCCACTGGGCTGGCCCTGCTCAATGGGGACTTTATCAAACCAATCCCCC CGAAGATGAACGAATTGTGCACAACATGGAGCATGGTGGGGTAATTATTTGGTTCAAGCCCAGTGCAGTCAGCGCCGCAG AAAACGATCAATTGGTTAAATTGTTTACTGCTTTGAGCGCTGAACAATATCGCACGATTTTGGTTAGCCGCGAAAATATG GATACCAAAATTGCCATGACTGCCTGGAACCATCGCCAATTGCTTGATAGTGTTGATGAAACCGCAATTCGTGCCTTCTT CGATGAGTTTATTCTCAAAGGCCCAGAGTGCGTTAACTTGCGCTGTCCTCAATAG
Upstream 100 bases:
>100_bases CGCCACCAACACCGCTTTACTTAATAATAATGCTCAGGTAGCTGCTCAAGTTGCAGTTGCTTTGTTCCAATCAGTTTAAG TTATTCAAGGAGTTTTTCGC
Downstream 100 bases:
>100_bases GCTTAATTAAATAAGTGCGCCCACTTCAAAACGAAGTGGGCGCATTTTTTATTGATCAATTTAACCTAGTTGCCGTAGCG CCAGCGGCGATAATGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSQPRRGRRQVGQKSRLPLFFGIGAVLLVIVVIAVVVLNGGEDKVDKVTVAEGTTAPSTTGVVQELPDEGQQHVADGEKV AYKQNPPTSGSHWAGPAQWGLYQTNPPEDERIVHNMEHGGVIIWFKPSAVSAAENDQLVKLFTALSAEQYRTILVSRENM DTKIAMTAWNHRQLLDSVDETAIRAFFDEFILKGPECVNLRCPQ
Sequences:
>Translated_204_residues MSQPRRGRRQVGQKSRLPLFFGIGAVLLVIVVIAVVVLNGGEDKVDKVTVAEGTTAPSTTGVVQELPDEGQQHVADGEKV AYKQNPPTSGSHWAGPAQWGLYQTNPPEDERIVHNMEHGGVIIWFKPSAVSAAENDQLVKLFTALSAEQYRTILVSRENM DTKIAMTAWNHRQLLDSVDETAIRAFFDEFILKGPECVNLRCPQ >Mature_203_residues SQPRRGRRQVGQKSRLPLFFGIGAVLLVIVVIAVVVLNGGEDKVDKVTVAEGTTAPSTTGVVQELPDEGQQHVADGEKVA YKQNPPTSGSHWAGPAQWGLYQTNPPEDERIVHNMEHGGVIIWFKPSAVSAAENDQLVKLFTALSAEQYRTILVSRENMD TKIAMTAWNHRQLLDSVDETAIRAFFDEFILKGPECVNLRCPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22489; Mature: 22358
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPRRGRRQVGQKSRLPLFFGIGAVLLVIVVIAVVVLNGGEDKVDKVTVAEGTTAPSTT CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC GVVQELPDEGQQHVADGEKVAYKQNPPTSGSHWAGPAQWGLYQTNPPEDERIVHNMEHGG HHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC VIIWFKPSAVSAAENDQLVKLFTALSAEQYRTILVSRENMDTKIAMTAWNHRQLLDSVDE EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCHHHHHHHHHH TAIRAFFDEFILKGPECVNLRCPQ HHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure SQPRRGRRQVGQKSRLPLFFGIGAVLLVIVVIAVVVLNGGEDKVDKVTVAEGTTAPSTT CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC GVVQELPDEGQQHVADGEKVAYKQNPPTSGSHWAGPAQWGLYQTNPPEDERIVHNMEHGG HHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC VIIWFKPSAVSAAENDQLVKLFTALSAEQYRTILVSRENMDTKIAMTAWNHRQLLDSVDE EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCHHHHHHHHHH TAIRAFFDEFILKGPECVNLRCPQ HHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA