Click here to switch to the map view.

The map label for this gene is psuG

Identifier: 159899528

GI number: 159899528

Start: 3800141

End: 3801052

Strand: Reverse

Name: psuG

Synonym: Haur_3009

Alternate gene names: 159899528

Gene position: 3801052-3800141 (Counterclockwise)

Preceding gene: 159899531

Following gene: 159899527

Centisome position: 59.89

GC content: 55.37

Gene sequence:

>912_bases
GTGACGAAGTTAATTCTCGCACCTGAGGTGCAAGCAGCGTTTGCCAATGGCCAACCAGTGGTGGCCTTGGAATCTACTGT
GATTAGCCATGGCTTGCCGTACCCGCATAATCGTGAGATTGCCTTGCAGCTTGAGGCGACTGTACGAGCCGGGGGAGCTG
TGCCTGCCACGATTGCCGTGATTCAAGGGCAAGTGCATGTTGGGCTGACCAACGAGCAAATTGAGCATTTTGCCACGGCC
ACGGATGTGCTCAAACTCAGTCGCCGCGATATTGGCTACGCGGTAGCTGCTGGCCGCGATGGCGCTACTACGGTCGCTGC
AACGATGGCCATCGCCGAGTTGGCGGGCATTCAGGTGTTTGCAACTGGCGGAATTGGCGGCGTGCATCGGGGTGCTCGCG
ATACCTGGGATGTTTCAGCCGATCTTGGGGAGTTGGGCAAAAGCTCAGTTTTAGTGGTTTGCGCTGGCGCTAAATCGATT
CTTGATTTGCCAGCAACGCTTGAAGTGCTCGAAACCTATGGTGTGCCCGTGGTTGGCTATACGACCGAAGAGTTACCAGC
TTTCTATAGTGCTCATAGTGGTTTGCAATTGGGTCGCCGTGTTGATGACCCAACTCAAGCCGCCGCCGCATGGGCCGCTC
ATCGCTTGTATGGCGGGGGCAGTGGCATGGTTTTGGCAGTGCCACCACCGGTCGAAAAAGCGCTTGATCCTCAATTTGTC
GAGGCGGCGATTGGTCGGGCAATTGCCCAAGCCGAAGCAGCAGGCATTCGTGGCGCAGCAGTTACGCCATTTTTGCTGAG
TGCCATGGCCCGCGAAACCGAAGGCGAAAGCATCGCCACCAACACCGCTTTACTTAATAATAATGCTCAGGTAGCTGCTC
AAGTTGCAGTTGCTTTGTTCCAATCAGTTTAA

Upstream 100 bases:

>100_bases
TCGGCACGCATCTAGAAGATGTAGTTATGGTATAGTTTTGCTTTGATTGAAGTGATCGAGGCTGACCCACGTTTTTGATT
CACACAGAAGGAAATCCATT

Downstream 100 bases:

>100_bases
GTTATTCAAGGAGTTTTTCGCATGTCTCAACCTCGTCGTGGTCGTCGCCAAGTAGGCCAAAAATCGCGTTTGCCATTGTT
TTTTGGCATCGGAGCCGTGC

Product: indigoidine synthase A family protein

Products: NA

Alternate protein names: PsiMP glycosidase

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTKLILAPEVQAAFANGQPVVALESTVISHGLPYPHNREIALQLEATVRAGGAVPATIAVIQGQVHVGLTNEQIEHFATA
TDVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVFATGGIGGVHRGARDTWDVSADLGELGKSSVLVVCAGAKSI
LDLPATLEVLETYGVPVVGYTTEELPAFYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFV
EAAIGRAIAQAEAAGIRGAAVTPFLLSAMARETEGESIATNTALLNNNAQVAAQVAVALFQSV

Sequences:

>Translated_303_residues
MTKLILAPEVQAAFANGQPVVALESTVISHGLPYPHNREIALQLEATVRAGGAVPATIAVIQGQVHVGLTNEQIEHFATA
TDVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVFATGGIGGVHRGARDTWDVSADLGELGKSSVLVVCAGAKSI
LDLPATLEVLETYGVPVVGYTTEELPAFYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFV
EAAIGRAIAQAEAAGIRGAAVTPFLLSAMARETEGESIATNTALLNNNAQVAAQVAVALFQSV
>Mature_302_residues
TKLILAPEVQAAFANGQPVVALESTVISHGLPYPHNREIALQLEATVRAGGAVPATIAVIQGQVHVGLTNEQIEHFATAT
DVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVFATGGIGGVHRGARDTWDVSADLGELGKSSVLVVCAGAKSIL
DLPATLEVLETYGVPVVGYTTEELPAFYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFVE
AAIGRAIAQAEAAGIRGAAVTPFLLSAMARETEGESIATNTALLNNNAQVAAQVAVALFQSV

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family

Homologues:

Organism=Escherichia coli, GI1788490, Length=294, Percent_Identity=52.3809523809524, Blast_Score=294, Evalue=6e-81,
Organism=Caenorhabditis elegans, GI25147470, Length=297, Percent_Identity=46.1279461279461, Blast_Score=255, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24580669, Length=300, Percent_Identity=49.3333333333333, Blast_Score=271, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSUG_HERA2 (A9B4S4)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001545775.1
- ProteinModelPortal:   A9B4S4
- SMR:   A9B4S4
- GeneID:   5734896
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_3009
- HOGENOM:   HBG308892
- OMA:   PATIAVM
- ProtClustDB:   CLSK862888
- BioCyc:   HAUR316274:HAUR_3009-MONOMER
- HAMAP:   MF_01876
- InterPro:   IPR022830
- InterPro:   IPR007342
- PANTHER:   PTHR10584:SF1

Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA

EC number: NA

Molecular weight: Translated: 31072; Mature: 30940

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLILAPEVQAAFANGQPVVALESTVISHGLPYPHNREIALQLEATVRAGGAVPATIAV
CCEEEECCCHHHHHCCCCEEEEEHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEE
IQGQVHVGLTNEQIEHFATATDVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVF
EECEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCEEEE
ATGGIGGVHRGARDTWDVSADLGELGKSSVLVVCAGAKSILDLPATLEVLETYGVPVVGY
EECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCHHHHCCCHHHHHHHHCCCCEEEC
TTEELPAFYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFV
CHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHH
EAAIGRAIAQAEAAGIRGAAVTPFLLSAMARETEGESIATNTALLNNNAQVAAQVAVALF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHH
QSV
HCC
>Mature Secondary Structure 
TKLILAPEVQAAFANGQPVVALESTVISHGLPYPHNREIALQLEATVRAGGAVPATIAV
CEEEECCCHHHHHCCCCEEEEEHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEE
IQGQVHVGLTNEQIEHFATATDVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVF
EECEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCEEEE
ATGGIGGVHRGARDTWDVSADLGELGKSSVLVVCAGAKSILDLPATLEVLETYGVPVVGY
EECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCHHHHCCCHHHHHHHHCCCCEEEC
TTEELPAFYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFV
CHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHH
EAAIGRAIAQAEAAGIRGAAVTPFLLSAMARETEGESIATNTALLNNNAQVAAQVAVALF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHH
QSV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA