The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899505

Identifier: 159899505

GI number: 159899505

Start: 3771413

End: 3772438

Strand: Reverse

Name: 159899505

Synonym: Haur_2986

Alternate gene names: NA

Gene position: 3772438-3771413 (Counterclockwise)

Preceding gene: 159899506

Following gene: 159899504

Centisome position: 59.44

GC content: 42.5

Gene sequence:

>1026_bases
ATGGATCTCAGTATTGTGCGTGAACGCCTGTTGCAGGTTGTTATTTCATTGACGGTCATCATTGGTGTATTTGGTTTAGC
GTTTTTGGGCTTAGGAACTGTATTTTCGAATACAGTTCTTTTAATAGTTAGTAGCATTATGGGAGTAAATGCGCTCATCT
GTGGTTTTATGTGGTATGGTTACGATAATTATAGTAACACCACAGTCGTCTGGTCGATTGGGGCAAGTTTACTGTTTTCA
ACGATTATATTGGCTTTGATCCAGCCAATTTTATCAACTGGCTATATGTTTACGCCATTAATTGTAGCAATTACCGGGCT
ACAATATATTTCTAATGAGCAAAAAGGTACGATTGTTGTTACGTCAATTAGTAGCAGTATTGTGGCTTTTTTTGCTGGTT
TATTTAGCCCATTTAAAGAATATCAAGTCTTGTCATGGTTTGTCTATTTGAATGCAGCAGTGATTATCGGGATCTTTATT
ATTATTGGCTTTTTGTTATGGCAATTCAATCAACGCTTGATTAGCATGATCGATTCGATTACGGAATCGAACGCTGCGTT
GGCGCTCAAAAATGAGGTTTTGCTCTCAACCAACGGCGATTTGAAAAAGCAAATTGAGCTGGAAAAACAATTACGCGAGC
AAATTGCTGATCTAGAAGTGCCAATTACTGAATTAGCCCACGACGTGATTTATGCCCCAATTGTTGGGCATCTCGATGAT
CAACGGATCGATACCTTTCGCGAAGCCTTATTGAAACGGGTCCACGAGCAGCGTGCTCGCGCAGTGGTGCTTGATGTTAC
TAGTATTGCCCATATCGATACCTATGGCTGCGGGTTGCTGACCCAAACGATTCAAACGGTCAAATTGTTGGGAACCCAAG
TCGTGCTTTGTGGTATTTCGGCCTCGATGGCGATGATTTTGACCAACTTAGGCATTTCGTTTGGCGAAGATCTGCGGGTG
GCTCGTAGCCCAAGCGATGCGATGCGCATGCTGGGTGTCGGCGAAAAGCAGTTGATGCTTGGCTAA

Upstream 100 bases:

>100_bases
AGCTTGTATCGCTTTGTCGATGGTTTAGCTACCTGGATGCGAGCAAACCACGATTGGTCTACCATGACCTCTCGTTATCA
GACATCTACCGAGGAATCCC

Downstream 100 bases:

>100_bases
GTCTGCTTGTCGGTCGAATGATGAATCGCGGCTTCCCTCTTGCGATGGATTGCAAGAGGGTTTTTTGTGGTTAAATAGCC
ATCATGCCGAGATGGATTTA

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS; PAS/PAC Sensor Protein; Sigma Activity Regulator; Positive Regulator Of Sigma-B; Sigma-B Regulator Rsbr; Anti-Anti Sigma Factor Protein; Anti-Anti-Sigma Regulatory Factor; Sugar Regulator; STAS Domain-Containing Protein; Protein Kinase

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYGYDNYSNTTVVWSIGASLLFS
TIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVVTSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFI
IIGFLLWQFNQRLISMIDSITESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD
QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGISASMAMILTNLGISFGEDLRV
ARSPSDAMRMLGVGEKQLMLG

Sequences:

>Translated_341_residues
MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYGYDNYSNTTVVWSIGASLLFS
TIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVVTSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFI
IIGFLLWQFNQRLISMIDSITESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD
QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGISASMAMILTNLGISFGEDLRV
ARSPSDAMRMLGVGEKQLMLG
>Mature_341_residues
MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYGYDNYSNTTVVWSIGASLLFS
TIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVVTSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFI
IIGFLLWQFNQRLISMIDSITESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD
QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGISASMAMILTNLGISFGEDLRV
ARSPSDAMRMLGVGEKQLMLG

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37418; Mature: 37418

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YDNYSNTTVVWSIGASLLFSTIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVV
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEE
TSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFIIIGFLLWQFNQRLISMIDSI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD
HCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGIS
HHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMAMILTNLGISFGEDLRVARSPSDAMRMLGVGEKQLMLG
HHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YDNYSNTTVVWSIGASLLFSTIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVV
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEE
TSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFIIIGFLLWQFNQRLISMIDSI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD
HCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGIS
HHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMAMILTNLGISFGEDLRVARSPSDAMRMLGVGEKQLMLG
HHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA